Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.5307 Avicennia marina HOM05D000203 ORTHO05D000135 3.5e-55 218.0 106 100.0
Migut.N01120 Erythranthe guttata HOM05D000203 ORTHO05D000135 1.4e-16 89.7 98 50.0
SalBow6G2791 Salvia bowleyana HOM05D000203 ORTHO05D000135 1.3e-14 83.2 89 49.4
SGA_v2.0_scaffold337G49184 Striga asiatica HOM05D000203 ORTHO05D000135 5.1e-14 81.3 97 48.5
Rhsim05G0093500 Rhododendron simsii HOM05D000203 ORTHO05D000135 1.1e-13 80.1 86 52.3
Oeu026465.1 Olea europaea HOM05D000203 ORTHO05D000135 1.9e-13 79.3 73 57.5
vmacro22262 Vaccinium macrocarpon HOM05D000203 ORTHO05D000135 1.2e-12 76.6 81 51.9
Nitab4.5_0003151g0030 Nicotiana tabacum HOM05D000203 ORTHO05D000135 1.8e-11 72.8 79 44.3
CAN.G338.45 Capsicum annuum HOM05D000203 ORTHO05D000135 4.0e-11 71.6 91 37.4
PGSC0003DMG400005119 Solanum tuberosum HOM05D000203 ORTHO05D000135 8.9e-11 70.5 79 46.8
Peaxi162Scf00274g00002 Petunia axillaris HOM05D000203 ORTHO05D000135 1.2e-10 70.1 85 42.4
Thecc.03G043300 Theobroma cacao HOM05D000203 ORTHO05D000135 2.6e-10 68.9 82 45.1
Migut.B00482 Erythranthe guttata HOM05D000203 ORTHO05D000135 3.4e-10 68.6 76 53.9
Sopen01g049030 Solanum pennellii HOM05D000203 ORTHO05D000135 4.4e-10 68.2 79 43.0
Hma1.2p1_0661F.1_g197950 Hydrangea macrophylla HOM05D000203 ORTHO05D000135 7.6e-10 67.4 82 46.3
Hma1.2p1_1758F.1_g301160 Hydrangea macrophylla HOM05D000203 ORTHO05D000135 9.9e-10 67.0 82 46.3
Cpa.g.sc20.85 Carica papaya HOM05D000203 ORTHO05D000135 1.3e-09 66.6 78 43.6
Solyc01g106700.3 Solanum lycopersicum HOM05D000203 ORTHO05D000135 1.3e-09 66.6 79 41.8
Cc02_g20240 Coffea canephora HOM05D000203 ORTHO05D000135 1.7e-09 66.2 79 43.0
Cc08_g09230 Coffea canephora HOM05D000203 ORTHO05D020489 2.2e-09 65.9 74 43.2
CAN.G504.7 Capsicum annuum HOM05D000203 ORTHO05D000135 2.9e-09 65.5 83 42.2
TAR285G0004 Trochodendron aralioides HOM05D000203 ORTHO05D000135 2.9e-09 65.5 76 43.4
Sabra04G0001000 Salix brachista HOM05D000203 ORTHO05D000135 6.4e-09 64.3 74 43.2
Haze_02883 Corylus avellana HOM05D000025 ORTHO05D000135 2.4e-08 62.4 78 44.9
CiPaw.15G084600 Carya illinoinensis HOM05D000203 ORTHO05D000135 3.2e-08 62.0 71 46.5
Potri.017G040700 Populus trichocarpa HOM05D000203 ORTHO05D000135 3.2e-08 62.0 76 42.1
Lsat_1_v5_gn_1_65880 Lactuca sativa HOM05D000203 ORTHO05D000135 9.2e-08 60.5 79 41.8
Actinidia04399 Actinidia chinensis HOM05D000203 ORTHO05D000135 1.6e-07 59.7 65 55.4
Duzib084G1411 Durio zibethinus HOM05D000203 ORTHO05D000135 1.6e-07 59.7 82 43.9
Potri.017G039800 Populus trichocarpa HOM05D000203 ORTHO05D000135 2.1e-07 59.3 76 40.8
Potri.017G040600 Populus trichocarpa HOM05D000203 ORTHO05D000135 2.1e-07 59.3 76 40.8
Cfa010503 Carpinus fangiana HOM05D000203 ORTHO05D000135 2.7e-07 58.9 73 43.8
CDE07G1711 Ceratophyllum demersum HOM05D000203 ORTHO05D000135 2.7e-07 58.9 79 34.2
PSO170G0964 Papaver somniferum HOM05D000203 ORTHO05D000135 2.7e-07 58.9 90 32.2
Cfa011040 Carpinus fangiana HOM05D000203 ORTHO05D000135 3.5e-07 58.5 73 45.2
Lsat_1_v5_gn_2_98180 Lactuca sativa HOM05D000203 ORTHO05D000135 3.5e-07 58.5 74 43.2
Oeu037771.1 Olea europaea HOM05D001079 ORTHO05D000135 3.5e-07 58.5 95 40.0
Sabra10G0051300 Salix brachista HOM05D000203 ORTHO05D000135 3.5e-07 58.5 76 40.8
Duzib205G0754 Durio zibethinus HOM05D000203 ORTHO05D020489 4.6e-07 58.2 65 49.2
ECA238G3185 Erigeron canadensis HOM05D000203 ORTHO05D000135 4.6e-07 58.2 84 36.9
Nitab4.5_0005046g0030 Nicotiana tabacum HOM05D000203 ORTHO05D000135 4.6e-07 58.2 79 35.4
Lsat_1_v5_gn_1_65780 Lactuca sativa HOM05D000203 ORTHO05D000135 6.0e-07 57.8 75 42.7
MBI16_g05030_MAGBIO Magnolia biondii HOM05D000203 ORTHO05D000135 6.0e-07 57.8 77 35.1
PSO302G0246 Papaver somniferum HOM05D000203 ORTHO05D000135 6.0e-07 57.8 88 34.1
Potri.004G002400 Populus trichocarpa HOM05D000203 ORTHO05D000135 6.0e-07 57.8 67 41.8
CsaV3_3G045410 Cucumis sativus L. HOM05D000203 ORTHO05D000135 1.3e-06 56.6 93 38.7
Dinv05939 Davidia involucrata HOM05D000203 ORTHO05D000135 1.3e-06 56.6 83 39.8
Dinv43670 Davidia involucrata HOM05D000203 ORTHO05D000135 1.3e-06 56.6 73 41.1
Lj9C337T6 Lonicera japonica HOM05D000203 ORTHO05D000135 1.3e-06 56.6 83 36.1
PSO541G1434 Papaver somniferum HOM05D000203 ORTHO05D000135 1.7e-06 56.2 77 39.0
CDE06G0256 Ceratophyllum demersum HOM05D000203 ORTHO05D000135 2.3e-06 55.8 79 32.9
ClCG10G009960 Citrullus lanatus HOM05D000203 ORTHO05D000135 2.3e-06 55.8 94 35.1
Manes.07G039300 Manihot esculenta HOM05D000203 ORTHO05D000135 2.3e-06 55.8 77 42.9
QL11p028776 Quercus lobata HOM05D000203 ORTHO05D000135 2.3e-06 55.8 77 39.0
ECA232G3204 Erigeron canadensis HOM05D000203 ORTHO05D000135 3.0e-06 55.5 71 40.8
Lsat_1_v5_gn_1_65800 Lactuca sativa HOM05D000203 ORTHO05D000135 3.0e-06 55.5 79 40.5
MD02G1221000 Malus domestica HOM05D000203 ORTHO05D000135 3.0e-06 55.5 92 38.0
Manes.13G057000 Manihot esculenta HOM05D000203 ORTHO05D000135 3.9e-06 55.1 72 41.7
PSO675G4825 Papaver somniferum HOM05D000203 ORTHO05D000135 3.9e-06 55.1 77 39.0
QL11p028766 Quercus lobata HOM05D000203 ORTHO05D000135 3.9e-06 55.1 85 35.3
HanXRQChr01g0018311 Helianthus annuus HOM05D000203 ORTHO05D000135 5.1e-06 54.7 79 40.5
PSO675G7023 Papaver somniferum HOM05D000203 ORTHO05D000135 5.1e-06 54.7 79 41.8
CAN.G730.6 Capsicum annuum HOM05D000203 ORTHO05D000135 6.6e-06 54.3 77 42.9
MELO3C003801.2 Cucumis melo HOM05D000203 ORTHO05D000135 6.6e-06 54.3 93 36.6
MELO3C018030.2 Cucumis melo HOM05D000203 ORTHO05D000135 6.6e-06 54.3 87 33.3
CsaV3_4G000010 Cucumis sativus L. HOM05D000203 ORTHO05D000135 6.6e-06 54.3 87 33.3
Lsat_1_v5_gn_2_111821 Lactuca sativa HOM05D000203 ORTHO05D000135 6.6e-06 54.3 86 36.0
PSO541G4057 Papaver somniferum HOM05D000203 ORTHO05D000135 6.6e-06 54.3 79 40.5
TAR285G0001 Trochodendron aralioides HOM05D000203 ORTHO05D000135 6.6e-06 54.3 77 36.4
CAN.G744.6 Capsicum annuum HOM05D000203 ORTHO05D000135 8.6e-06 53.9 79 32.9
ECA238G3159 Erigeron canadensis HOM05D000203 ORTHO05D000135 8.6e-06 53.9 76 38.2
Nitab4.5_0001477g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 8.6e-06 53.9 79 36.7
Sed0009196 Sechium edule HOM05D000203 ORTHO05D000135 8.6e-06 53.9 93 36.6


User provided reference genes

Program Settings