Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.5176 Avicennia marina HOM05D008155 ORTHO05D010411 5.6e-74 280.8 137 100.0
Oeu034763.2 Olea europaea HOM05D008155 ORTHO05D010411 3.8e-22 108.6 141 49.6
SalBow4G1718 Salvia bowleyana HOM05D008155 ORTHO05D010411 1.9e-21 106.3 125 54.4
SalBow4G2153 Salvia bowleyana HOM05D008155 ORTHO05D010411 1.9e-21 106.3 125 54.4
Migut.N00987 Erythranthe guttata HOM05D008155 ORTHO05D010411 3.2e-21 105.5 145 51.0
SalBow8G5556 Salvia bowleyana HOM05D008155 ORTHO05D010411 2.7e-20 102.4 59 78.0
Solyc01g102460.4 Solanum lycopersicum HOM05D008155 ORTHO05D010411 8.0e-20 100.9 147 48.3
Sopen01g044900 Solanum pennellii HOM05D008155 ORTHO05D010411 8.0e-20 100.9 147 48.3
Ciclev10029557m.g Citrus clementina HOM05D008155 ORTHO05D010411 1.0e-14 84.0 57 63.2
RcHm_v2.0_Chr3g0459031 Rosa chinensis HOM05D008155 ORTHO05D010411 8.5e-14 80.9 91 49.5
CSS0018964 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 1.5e-13 80.1 149 41.6
PGSC0003DMG400018233 Solanum tuberosum HOM05D008155 ORTHO05D010411 1.5e-13 80.1 102 49.0
CSS0011875 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 2.5e-13 79.3 140 42.1
Lsat_1_v5_gn_5_146861 Lactuca sativa HOM05D008155 ORTHO05D010411 3.2e-13 79.0 125 47.2
FAN14G4286 Fragaria x ananassa HOM05D008155 ORTHO05D010411 4.2e-13 78.6 87 48.3
QL03p011396 Quercus lobata HOM05D008155 ORTHO05D010411 9.4e-13 77.4 96 43.8
Manes.09G182600 Manihot esculenta HOM05D008155 ORTHO05D010411 6.1e-12 74.7 88 50.0
Hma1.2p1_0157F.1_g069510 Hydrangea macrophylla HOM05D008155 ORTHO05D010411 1.0e-11 73.9 137 40.9
FAN02G1576 Fragaria x ananassa HOM05D008155 ORTHO05D010411 1.4e-11 73.6 87 46.0
TAR365G0599 Trochodendron aralioides HOM05D008155 ORTHO05D010411 1.8e-11 73.2 55 56.4
Manes.08G106200 Manihot esculenta HOM05D008155 ORTHO05D010411 2.3e-11 72.8 54 63.0
Prupe.6G302400 Prunus persica HOM05D008155 ORTHO05D010411 1.2e-10 70.5 61 54.1
Nitab4.5_0006193g0010 Nicotiana tabacum HOM05D008155 ORTHO05D010411 1.5e-10 70.1 56 60.7
VMungo1383G2435 Vigna mungo HOM05D008155 ORTHO05D010411 1.5e-10 70.1 132 36.4
Atru.chr12.1507 Acer truncatum HOM05D008155 ORTHO05D010411 2.0e-10 69.7 55 56.4
TAR362G0658 Trochodendron aralioides HOM05D008155 ORTHO05D010411 3.4e-10 68.9 55 52.7
unitig_699.g19831 Utricularia gibba HOM05D008155 ORTHO05D010411 4.4e-10 68.6 121 41.3
Gohir.A13G206400 Gossypium hirsutum HOM05D008155 ORTHO05D010411 7.5e-10 67.8 54 55.6
MD04G1183800 Malus domestica HOM05D008155 ORTHO05D010411 9.8e-10 67.4 51 54.9
Atru.chr12.1502 Acer truncatum HOM05D008155 ORTHO05D010411 1.3e-09 67.0 51 56.9
CANSAT54G1408 Cannabis sativa HOM05D008155 ORTHO05D010411 1.3e-09 67.0 57 56.1
Gorai.013G241100 Gossypium raimondii HOM05D008155 ORTHO05D010411 1.3e-09 67.0 87 42.5
Aqoxy7G02124 Aquilegia oxysepala HOM05D008155 ORTHO05D010411 1.7e-09 66.6 109 41.3
vmacro19804 Vaccinium macrocarpon HOM05D003050 ORTHO05D003513 1.7e-09 66.6 116 43.1
TPR.G35721 Trifolium pratense HOM05D008155 ORTHO05D010411 2.2e-09 66.2 55 49.1
Phvul.001G221000 Phaseolus vulgaris HOM05D008155 ORTHO05D010411 2.8e-09 65.9 137 38.0
unitig_747.g21289 Utricularia gibba HOM05D008155 ORTHO05D010411 2.8e-09 65.9 119 42.9
Cfa004403 Carpinus fangiana HOM05D008155 ORTHO05D010411 3.7e-09 65.5 101 42.6
MD12G1197100 Malus domestica HOM05D008155 ORTHO05D010411 3.7e-09 65.5 53 52.8
Potri.013G000200 Populus trichocarpa HOM05D008155 ORTHO05D010411 3.7e-09 65.5 51 58.8
arahy.Tifrunner.gnm1.ann1.QRZ24D Arachis hypogaea HOM05D008155 ORTHO05D010411 4.8e-09 65.1 57 54.4
Haze_15003 Corylus avellana HOM05D008155 ORTHO05D010411 8.3e-09 64.3 97 42.3
Potri.005G001100 Populus trichocarpa HOM05D008155 ORTHO05D010411 1.4e-08 63.5 53 52.8
Glyma.19G224100 Glycine max HOM05D008155 ORTHO05D010411 2.4e-08 62.8 124 37.9
Glyma.03G227200 Glycine max HOM05D008155 ORTHO05D010411 4.1e-08 62.0 139 36.0
Thecc.05G331400 Theobroma cacao HOM05D008155 ORTHO05D010411 4.1e-08 62.0 85 42.4
SalBow3G3360 Salvia bowleyana HOM05D001167 ORTHO05D010411 5.4e-08 61.6 35 77.1
Medtr7g111230 Medicago truncatula HOM05D008155 ORTHO05D010411 7.0e-08 61.2 55 45.5
Lsat_1_v5_gn_1_75801 Lactuca sativa HOM05D008155 ORTHO05D010411 1.6e-07 60.1 93 38.7
MELO3C004141.2 Cucumis melo HOM05D008155 ORTHO05D010411 5.9e-07 58.2 51 56.9
Sc03g0006010 Simmondsia chinensis HOM05D008155 ORTHO05D010411 5.9e-07 58.2 51 49.0
Cpa.g.sc48.233 Carica papaya HOM05D008155 ORTHO05D010411 1.3e-06 57.0 49 55.1
EL10Ac6g15313 Beta vulgaris HOM05D008155 ORTHO05D010411 2.3e-06 56.2 56 51.8
DCAR_022333 Daucus carota HOM05D008155 ORTHO05D010411 2.9e-06 55.8 139 32.4
Rhsim11G0107200 Rhododendron simsii HOM05D008155 ORTHO05D010411 3.8e-06 55.5 112 38.4
Ah.03g147790 Amaranthus hybridus HOM05D008155 ORTHO05D010411 5.0e-06 55.1 54 46.3
TWI56G0796 Tripterygium wilfordii HOM05D008155 ORTHO05D010411 5.0e-06 55.1 63 49.2
Aa31LG11G10020 Aethionema arabicum HOM05D008255 ORTHO05D011943 8.6e-06 54.3 50 46.0


User provided reference genes

Program Settings