Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 5.7e-194 681.0 420 100.0
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 2.3e-70 270.4 440 44.3
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 1.7e-65 254.2 432 42.8
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 2.3e-62 243.8 421 43.2
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 4.4e-61 239.6 455 39.3
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 8.6e-57 225.3 345 42.9
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 9.5e-56 221.9 440 40.9
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 3.7e-52 209.9 451 35.5
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 7.0e-51 205.7 449 38.1
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 1.6e-47 194.5 454 35.9
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 8.1e-47 192.2 443 35.0
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 5.2e-46 189.5 460 32.8
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 1.5e-45 188.0 448 34.4
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 2.0e-45 187.6 453 35.3
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 1.3e-44 184.9 504 32.3
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 1.7e-44 184.5 454 33.0
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 4.9e-44 183.0 486 33.1
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 6.4e-44 182.6 483 32.5
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 1.1e-43 181.8 514 31.7
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 2.4e-43 180.6 473 32.8
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 3.2e-43 180.3 468 32.9
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 3.2e-43 180.3 461 33.0
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 1.6e-42 177.9 451 34.4
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 2.7e-42 177.2 452 34.7
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 2.3e-41 174.1 461 32.8
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 3.0e-41 173.7 477 31.9
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 1.5e-40 171.4 467 33.0
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 1.5e-40 171.4 432 33.8
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 2.5e-40 170.6 437 33.4
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 3.3e-40 170.2 486 32.7
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 3.3e-40 170.2 473 31.7
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 7.3e-40 169.1 440 38.0
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 1.2e-39 168.3 439 34.4
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 2.1e-39 167.5 448 31.7
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 2.8e-39 167.2 447 31.5
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 1.4e-38 164.9 467 33.4
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 2.4e-38 164.1 458 32.8
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 3.1e-38 163.7 456 35.3
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 4.0e-38 163.3 405 33.3
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 4.0e-38 163.3 484 32.9
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 6.8e-38 162.5 438 33.3
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 1.2e-37 161.8 436 33.7
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 2.6e-37 160.6 437 33.6
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 5.8e-37 159.5 456 31.4
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 5.8e-37 159.5 475 31.8
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 9.9e-37 158.7 327 37.0
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 6.4e-36 156.0 443 33.9
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 6.4e-36 156.0 444 30.6
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.4e-35 154.8 447 32.7
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 1.9e-35 154.5 455 31.0
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 2.4e-35 154.1 481 28.9
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 2.4e-35 154.1 201 45.8
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 3.2e-35 153.7 511 30.9
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 5.4e-35 152.9 452 31.0
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 1.2e-34 151.8 435 32.9
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 1.6e-34 151.4 439 31.4
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 3.5e-34 150.2 461 31.0
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 3.5e-34 150.2 439 33.3
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 7.8e-34 149.1 465 32.3
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 3.9e-33 146.7 448 31.2
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 3.9e-33 146.7 448 31.0
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 3.9e-33 146.7 445 32.6
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 5.1e-33 146.4 446 32.7
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 5.1e-33 146.4 446 32.7
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 6.6e-33 146.0 449 32.3
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 6.6e-33 146.0 460 29.6
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 8.7e-33 145.6 434 34.8
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 1.1e-32 145.2 448 33.5
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 1.9e-32 144.4 448 31.9
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 4.3e-32 143.3 463 29.6
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 7.3e-32 142.5 448 31.7
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 9.6e-32 142.1 449 29.0
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 9.6e-32 142.1 426 29.6
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 1.6e-31 141.4 478 32.2
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 2.8e-31 140.6 457 28.9
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 6.2e-31 139.4 453 32.7
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 8.1e-31 139.0 443 28.2
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 3.1e-30 137.1 461 28.6
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 9.0e-30 135.6 431 34.8
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 1.2e-29 135.2 461 29.3
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 2.0e-29 134.4 471 28.2
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 2.6e-29 134.0 430 31.2
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 3.4e-29 133.7 430 30.9
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 3.4e-29 133.7 430 30.9
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 3.4e-29 133.7 431 29.9
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 5.8e-29 132.9 450 30.0
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 3.8e-28 130.2 471 32.9
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 8.4e-28 129.0 477 28.7
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 1.2e-26 125.2 430 29.5
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 4.6e-26 123.2 449 33.2
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 6.0e-26 122.9 484 32.0
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 1.0e-25 122.1 462 34.6
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 1.9e-24 117.9 425 29.9
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 1.3e-23 115.2 444 28.2
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 1.8e-22 111.3 193 46.1
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 5.8e-21 106.3 185 40.5
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 2.2e-20 104.4 296 33.4
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 1.1e-19 102.1 169 37.9
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 1.9e-19 101.3 204 37.3
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 1.3e-17 95.1 341 28.2
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 8.7e-17 92.4 403 27.3
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 4.3e-16 90.1 118 47.5
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 4.3e-16 90.1 118 47.5
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 5.8e-13 79.7 427 26.7
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 3.0e-09 67.4 303 24.4
AUR62043432 Chenopodium quinoa HOM05D006668 ORTHO05D008252 1.3e-07 62.0 117 38.5
unitig_46.g18247 Utricularia gibba HOM05D006668 ORTHO05D008252 1.3e-07 62.0 460 23.5
BcaB07g30967 Brassica carinata HOM05D006668 ORTHO05D008252 2.8e-07 60.8 242 30.2
CSS0037366 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 3.7e-07 60.5 80 45.0
ATR0602G285 Amborella trichopoda HOM05D006668 ORTHO05D008252 1.4e-06 58.5 126 36.5
CSS0027561 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 1.8e-06 58.2 80 43.8
Haze_13262 Corylus avellana HOM05D006668 ORTHO05D008252 2.4e-06 57.8 121 38.0


User provided reference genes

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