Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.5016 Avicennia marina HOM05D003920 ORTHO05D004877 4.3e-181 637.9 323 100.0
Migut.N01471 Erythranthe guttata HOM05D003920 ORTHO05D004877 5.3e-131 471.5 337 73.3
Dinv43454 Davidia involucrata HOM05D003920 ORTHO05D004877 7.4e-125 451.1 354 68.6
TPR.G12140 Trifolium pratense HOM05D003920 ORTHO05D004877 7.4e-125 451.1 349 67.6
Manes.10G144700 Manihot esculenta HOM05D003920 ORTHO05D004877 9.7e-125 450.7 353 67.4
Prupe.2G011700 Prunus persica HOM05D003920 ORTHO05D004877 1.6e-124 449.9 359 66.9
MD02G1313900 Malus domestica HOM05D003920 ORTHO05D004877 2.8e-124 449.1 354 67.8
Lalb_Chr01g0015291 Lupinus albus HOM05D003920 ORTHO05D004877 3.7e-124 448.7 348 69.3
Medtr3g028190 Medicago truncatula HOM05D003920 ORTHO05D004877 3.7e-124 448.7 351 67.5
ECA248G0446 Erigeron canadensis HOM05D003920 ORTHO05D004877 4.8e-124 448.4 338 69.2
FvH4_7g00890 Fragaria vesca HOM05D003920 ORTHO05D004877 4.8e-124 448.4 355 67.3
Nn2g15431 Nelumbo nucifera HOM05D003920 ORTHO05D004877 6.3e-124 448.0 345 67.5
FAN06G2354 Fragaria x ananassa HOM05D003920 ORTHO05D004877 8.2e-124 447.6 355 67.0
Peaxi162Scf00407g00639 Petunia axillaris HOM05D003920 ORTHO05D004877 8.2e-124 447.6 352 65.6
Peaxi162Scf00428g00618 Petunia axillaris HOM05D003920 ORTHO05D004877 1.1e-123 447.2 352 65.9
Psat5g204200 Pisum sativum HOM05D003920 ORTHO05D004877 1.1e-123 447.2 349 67.0
unitig_85.g27216 Utricularia gibba HOM05D003920 ORTHO05D004877 1.4e-123 446.8 331 66.5
MD07G1008500 Malus domestica HOM05D003920 ORTHO05D004877 2.4e-123 446.0 354 68.4
TWI73G0359 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 4.1e-123 445.3 373 63.5
Ca_27172_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 6.9e-123 444.5 349 66.5
Gohir.A08G027700 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.2e-122 443.7 350 67.7
HanXRQChr01g0016141 Helianthus annuus HOM05D003920 ORTHO05D004877 2.0e-122 443.0 338 67.8
Nn7g36164 Nelumbo nucifera HOM05D003920 ORTHO05D004877 2.6e-122 442.6 345 68.1
arahy.Tifrunner.gnm1.ann1.Z50281 Arachis hypogaea HOM05D003920 ORTHO05D004877 4.5e-122 441.8 352 67.9
Gohir.D08G038400 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.0e-121 440.7 350 67.4
Eucgr.J01264 Eucalyptus grandis HOM05D003920 ORTHO05D004877 1.3e-121 440.3 354 66.9
DCAR_003208 Daucus carota HOM05D003920 ORTHO05D004877 1.7e-121 439.9 351 66.4
Lj3g0003225 Lotus japonicus HOM05D003920 ORTHO05D004877 1.7e-121 439.9 355 65.9
Sabra09G0046300 Salix brachista HOM05D003920 ORTHO05D004877 5.0e-121 438.3 350 67.1
Gorai.004G036900 Gossypium raimondii HOM05D003920 ORTHO05D004877 6.5e-121 438.0 350 67.1
VMungo1080G0709 Vigna mungo HOM05D003920 ORTHO05D004877 8.5e-121 437.6 355 65.6
Sabra16G0164300 Salix brachista HOM05D003920 ORTHO05D004877 1.1e-120 437.2 348 67.8
Glyma.15G272400 Glycine max HOM05D003920 ORTHO05D004877 2.5e-120 436.0 356 65.7
Potri.001G268200 Populus trichocarpa HOM05D003920 ORTHO05D004877 2.5e-120 436.0 350 67.7
Potri.009G062600 Populus trichocarpa HOM05D003920 ORTHO05D004877 3.2e-120 435.6 352 66.5
Sc10g0000010 Simmondsia chinensis HOM05D003920 ORTHO05D004877 4.2e-120 435.3 317 71.9
Nitab4.5_0000634g0100 Nicotiana tabacum HOM05D003920 ORTHO05D004877 7.2e-120 434.5 347 65.4
SalBow5G4770 Salvia bowleyana HOM05D003920 ORTHO05D004877 1.2e-119 433.7 333 67.6
arahy.Tifrunner.gnm1.ann1.LBVL0K Arachis hypogaea HOM05D003920 ORTHO05D004877 1.6e-119 433.3 345 67.8
Rhsim07G0054700 Rhododendron simsii HOM05D003920 ORTHO05D004877 2.1e-119 433.0 344 66.9
SGA_v2.0_scaffold167G38446 Striga asiatica HOM05D003920 ORTHO05D004877 2.1e-119 433.0 325 70.8
Phvul.005G019900 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 3.6e-119 432.2 356 64.9
Sopen10g011530 Solanum pennellii HOM05D003920 ORTHO05D004877 3.6e-119 432.2 354 64.7
Solyc10g038000.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 6.1e-119 431.4 354 65.3
Aqoxy2G00138 Aquilegia oxysepala HOM05D003920 ORTHO05D004877 1.0e-118 430.6 351 65.8
PGR044G2195 Punica granatum HOM05D003920 ORTHO05D004877 1.0e-118 430.6 356 63.8
BraA08t33064Z Brassica rapa HOM05D003920 ORTHO05D004877 1.4e-118 430.3 321 67.6
DCAR_022405 Daucus carota HOM05D003920 ORTHO05D004877 1.4e-118 430.3 352 65.3
CDE04G0006 Ceratophyllum demersum HOM05D003920 ORTHO05D004877 2.3e-118 429.5 341 64.8
PSO384G3532 Papaver somniferum HOM05D003920 ORTHO05D004877 1.5e-117 426.8 356 64.3
Sed0011667 Sechium edule HOM05D003920 ORTHO05D004877 2.6e-117 426.0 351 64.1
PSO339G5616 Papaver somniferum HOM05D003920 ORTHO05D004877 3.3e-117 425.6 356 64.9
Glyma.08G153800 Glycine max HOM05D003920 ORTHO05D004877 5.7e-117 424.9 357 64.1
Nitab4.5_0011837g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 5.7e-117 424.9 365 63.3
ATR0605G260 Amborella trichopoda HOM05D003920 ORTHO05D004877 7.4e-117 424.5 339 67.3
CAN.G709.1 Capsicum annuum HOM05D003920 ORTHO05D004877 7.4e-117 424.5 343 66.2
BcaC07g37767 Brassica carinata HOM05D003920 ORTHO05D004877 1.7e-116 423.3 320 67.2
Gorai.004G173300 Gossypium raimondii HOM05D003920 ORTHO05D004877 2.8e-116 422.5 354 63.6
Sopen01g034110 Solanum pennellii HOM05D003920 ORTHO05D004877 1.1e-115 420.6 352 62.2
Thhalv10010518m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 4.1e-115 418.7 333 64.6
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 6.9e-115 417.9 315 67.6
CARHR291420 Cardamine hirsuta HOM05D003920 ORTHO05D004877 9.1e-115 417.5 335 65.7
Solyc01g087030.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 1.2e-114 417.2 352 61.6
TAR369G0176 Trochodendron aralioides HOM05D003920 ORTHO05D004877 5.9e-114 414.8 356 62.4
MSTRG.20593 Avicennia marina HOM05D003920 ORTHO05D004877 7.7e-114 414.5 322 68.9
EL10Ac2g04315 Beta vulgaris HOM05D003920 ORTHO05D004877 2.2e-113 412.9 336 65.8
MBI04_g13623_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D004877 2.2e-113 412.9 354 63.3
AT3G08505 Arabidopsis thaliana HOM05D003920 ORTHO05D004877 5.0e-113 411.8 313 67.7
Thhalv10021103m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 6.5e-113 411.4 324 65.7
Sp1g00020 Schrenkiella parvula HOM05D003920 ORTHO05D004877 2.5e-112 409.5 347 62.0
QL04p007133 Quercus lobata HOM05D003920 ORTHO05D004877 3.2e-112 409.1 327 68.2
AL3G19480 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 7.2e-112 407.9 312 67.0
HPP92_005768 Vanilla planifolia HOM05D003920 ORTHO05D004877 7.2e-112 407.9 357 61.3
SEGI_34678 Sequoiadendron giganteum HOM05D003920 ORTHO05D004877 2.1e-111 406.4 316 64.9
Zm00001eb381600 Zea mays HOM05D003920 ORTHO05D004877 2.1e-111 406.4 360 60.6
AUR62009376 Chenopodium quinoa HOM05D003920 ORTHO05D004877 3.6e-111 405.6 335 64.5
vmacro13655 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 6.1e-111 404.8 407 55.3
RcHm_v2.0_Chr1g0315781 Rosa chinensis HOM05D003920 ORTHO05D004877 1.8e-110 403.3 328 66.8
THA.LOC104827426 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 1.8e-110 403.3 341 63.3
Carub.0003s0765 Capsella rubella HOM05D003920 ORTHO05D004877 1.5e-109 400.2 313 66.5
Ciclev10031666m.g Citrus clementina HOM05D003920 ORTHO05D004877 2.0e-109 399.8 314 63.1
FAN01G3017 Fragaria x ananassa HOM05D003920 ORTHO05D004877 2.6e-109 399.4 328 65.9
Sp3g06990 Schrenkiella parvula HOM05D003920 ORTHO05D004877 2.6e-109 399.4 326 63.5
CSS0030964 Camellia sinensis var. sinensis HOM05D003920 ORTHO05D004877 3.3e-109 399.1 327 67.0
FAN03G2194 Fragaria x ananassa HOM05D003920 ORTHO05D004877 4.4e-109 398.7 328 65.2
Lj9C630T11 Lonicera japonica HOM05D003920 ORTHO05D004877 7.4e-109 397.9 324 59.0
CsaV3_7G031170 Cucumis sativus L. HOM05D003920 ORTHO05D004877 6.3e-108 394.8 318 67.6
Thecc.01G412100 Theobroma cacao HOM05D003920 ORTHO05D004877 6.3e-108 394.8 327 67.0
MELO3C023541.2 Cucumis melo HOM05D003920 ORTHO05D004877 8.2e-108 394.4 318 67.6
THA.LOC104819067 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 1.1e-107 394.0 352 60.5
Haze_03212 Corylus avellana HOM05D003920 ORTHO05D004877 1.8e-107 393.3 322 66.1
Cc02_g27790 Coffea canephora HOM05D003920 ORTHO05D004877 2.4e-107 392.9 329 63.2
Atru.chr11.2647 Acer truncatum HOM05D003920 ORTHO05D004877 4.1e-107 392.1 319 65.8
CARHR082810 Cardamine hirsuta HOM05D003920 ORTHO05D004877 4.1e-107 392.1 312 64.1
COL.COLO4_23923 Corchorus olitorius HOM05D003920 ORTHO05D004877 5.3e-107 391.7 323 59.4
Lsat_1_v5_gn_1_107981 Lactuca sativa HOM05D003920 ORTHO05D004877 3.5e-106 389.0 307 67.1
BcaB03g11569 Brassica carinata HOM05D003920 ORTHO05D004877 1.0e-105 387.5 311 63.0
A03p35650 Brassica napus HOM05D003920 ORTHO05D004877 1.3e-105 387.1 308 63.3
BraA03t12740Z Brassica rapa HOM05D003920 ORTHO05D004877 2.2e-105 386.3 308 63.3
A08p10660 Brassica napus HOM05D003920 ORTHO05D004877 1.5e-104 383.6 296 66.9
TAR633G1074 Trochodendron aralioides HOM05D003920 ORTHO05D004877 1.5e-104 383.6 335 57.6
Aa31LG10G17420 Aethionema arabicum HOM05D003920 ORTHO05D004877 2.5e-104 382.9 416 52.2
BcaC01g04265 Brassica carinata HOM05D003920 ORTHO05D004877 2.5e-104 382.9 311 65.0
BcaC09g47976 Brassica carinata HOM05D003920 ORTHO05D004877 3.2e-104 382.5 312 62.2
C03p43290 Brassica napus HOM05D003920 ORTHO05D004877 4.2e-104 382.1 308 65.3
BolC3t16599H Brassica oleracea HOM05D003920 ORTHO05D004877 4.2e-104 382.1 308 65.3
BcaB04g21254 Brassica carinata HOM05D003920 ORTHO05D004877 8.0e-103 377.9 314 63.7
BraA01t04343Z Brassica rapa HOM05D003920 ORTHO05D004877 8.0e-103 377.9 309 62.1
BolC8t48154H Brassica oleracea HOM05D003920 ORTHO05D004877 1.8e-102 376.7 293 65.5
BolC8t49780H Brassica oleracea HOM05D003920 ORTHO05D004877 1.2e-101 374.0 291 65.3
AL5G46410 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 4.8e-100 368.6 320 61.9
Thhalv10023829m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 1.1e-99 367.5 339 58.4
Carub.0005s3016 Capsella rubella HOM05D003920 ORTHO05D004877 5.3e-99 365.2 317 62.1
Gohir.D08G166100 Gossypium hirsutum HOM05D003920 ORTHO05D004877 2.0e-98 363.2 219 73.1
Hund03665 Selenicereus undatus HOM05D003920 ORTHO05D004877 1.2e-93 347.4 325 60.6
SMO203G0245 Selaginella moellendorffii HOM05D003920 ORTHO05D004877 5.7e-93 345.1 324 58.6
Pp3c5_25680 Physcomitrium patens HOM05D003920 ORTHO05D004877 9.8e-93 344.4 337 49.6
SGA_v2.0_scaffold24G10678 Striga asiatica HOM05D003920 ORTHO05D004877 8.3e-92 341.3 312 60.3
ClCG09G004250 Citrullus lanatus HOM05D003920 ORTHO05D004877 7.0e-91 338.2 243 67.5
Nitab4.5_0004786g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.6e-90 337.0 344 59.6
Aa31LG5G18640 Aethionema arabicum HOM05D003920 ORTHO05D004877 2.9e-89 332.8 213 70.0
Manes.07G005000 Manihot esculenta HOM05D003920 ORTHO05D004877 3.8e-89 332.4 297 63.6
Mapoly0042s0020 Marchantia polymorpha HOM05D003920 ORTHO05D004877 5.5e-88 328.6 406 46.3
AUR62023057 Chenopodium quinoa HOM05D003920 ORTHO05D004877 6.1e-87 325.1 291 62.5
Sp5g00030 Schrenkiella parvula HOM05D003920 ORTHO05D004877 6.1e-87 325.1 315 57.8
Lj7A569G59 Lonicera japonica HOM05D003920 ORTHO05D004877 1.0e-86 324.3 283 55.1
TWI53G1741 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 3.0e-86 322.8 240 62.9
PGR044G2672 Punica granatum HOM05D003920 ORTHO05D004877 1.2e-85 320.9 336 54.5
Potri.004G134400 Populus trichocarpa HOM05D003920 ORTHO05D004877 2.6e-85 319.7 294 59.2
Actinidia24671 Actinidia chinensis HOM05D003920 ORTHO05D004877 2.2e-84 316.6 248 61.3
C08p21410 Brassica napus HOM05D003920 ORTHO05D004877 1.8e-83 313.5 195 68.7
Zm00001eb252860 Zea mays HOM05D003920 ORTHO05D004877 1.8e-83 313.5 325 47.4
BcaC07g39147 Brassica carinata HOM05D003920 ORTHO05D004877 4.1e-83 312.4 297 50.8
Gohir.A08G145200 Gossypium hirsutum HOM05D003920 ORTHO05D004877 2.7e-82 309.7 294 60.5
Peaxi162Scf00148g00610 Petunia axillaris HOM05D003920 ORTHO05D004877 2.9e-81 306.2 291 53.3
Nitab4.5_0001299g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 4.3e-80 302.4 329 50.8
Sabra04G0083700 Salix brachista HOM05D003920 ORTHO05D004877 3.0e-78 296.2 284 50.7
Lalb_Chr01g0015331 Lupinus albus HOM05D003920 ORTHO05D004877 1.6e-74 283.9 317 52.4
AagrBONN_evm.TU.Sc2ySwM_344.3645 Anthoceros agrestis HOM05D003920 ORTHO05D004877 2.7e-74 283.1 315 51.4
arahy.Tifrunner.gnm1.ann1.3CZ6TN Arachis hypogaea HOM05D003920 ORTHO05D004877 3.5e-74 282.7 319 51.7
Glyma.15G273000 Glycine max HOM05D003920 ORTHO05D004877 3.5e-74 282.7 324 52.2
Actinidia31057 Actinidia chinensis HOM05D003920 ORTHO05D004877 4.6e-74 282.3 315 56.2
Actinidia36714 Actinidia chinensis HOM05D003920 ORTHO05D004877 1.0e-73 281.2 316 48.4
vmacro08182 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 1.0e-73 281.2 296 55.4
Lalb_Chr20g0108061 Lupinus albus HOM05D003920 ORTHO05D004877 1.7e-73 280.4 311 50.8
arahy.Tifrunner.gnm1.ann1.NHZH5I Arachis hypogaea HOM05D003920 ORTHO05D004877 3.0e-73 279.6 320 51.2
VMungo1080G1751 Vigna mungo HOM05D003920 ORTHO05D004877 5.0e-73 278.9 319 51.4
TPR.G12281 Trifolium pratense HOM05D003920 ORTHO05D004877 5.6e-72 275.4 303 51.5
Lj3g0002246 Lotus japonicus HOM05D003920 ORTHO05D004877 1.2e-71 274.2 322 49.1
Phvul.005G020000 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 1.2e-71 274.2 317 52.7
Ca_14370_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 2.8e-71 273.1 318 52.5
Glyma.08G154100 Glycine max HOM05D003920 ORTHO05D004877 6.2e-71 271.9 321 51.1
Medtr3g028170 Medicago truncatula HOM05D003920 ORTHO05D004877 1.5e-69 267.3 311 51.4
Psat5g204240 Pisum sativum HOM05D003920 ORTHO05D004877 1.5e-69 267.3 326 47.2
Nitab4.5_0000254g0170 Nicotiana tabacum HOM05D003920 ORTHO05D004877 4.1e-67 259.2 258 52.7
Cre06.g278136 Chlamydomonas reinhardtii HOM05D003920 ORTHO05D004877 9.2e-59 231.5 213 46.9
unitig_26.g8826 Utricularia gibba HOM05D003920 ORTHO05D004877 1.2e-58 231.1 282 50.0
arahy.Tifrunner.gnm1.ann1.HIY6S0 Arachis hypogaea HOM05D003920 ORTHO05D004877 2.6e-53 213.4 315 44.4
arahy.Tifrunner.gnm1.ann1.YQ2HRW Arachis hypogaea HOM05D003920 ORTHO05D004877 7.6e-53 211.8 321 42.7
Nitab4.5_0003190g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 6.4e-52 208.8 235 48.5
PRCOL_00005356 Prasinoderma coloniale HOM05D003920 ORTHO05D004877 8.4e-52 208.4 324 40.1
GSVIVG01032073001 Vitis vinifera HOM05D003920 ORTHO05D004877 1.6e-47 194.1 101 86.1
Oeu039134.1 Olea europaea HOM05D003920 ORTHO05D004877 6.2e-47 192.2 101 86.1
Phvul.011G110100 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 1.1e-40 171.4 93 80.6
TPR.G31394 Trifolium pratense HOM05D002628 ORTHO05D002785 3.3e-16 90.1 126 34.9
QL04p032014 Quercus lobata HOM05D003920 ORTHO05D004877 6.9e-14 82.4 38 92.1
QL04p032319 Quercus lobata HOM05D003920 ORTHO05D004877 9.0e-14 82.0 48 75.0
QL04p005704 Quercus lobata HOM05D003920 ORTHO05D004877 1.0e-12 78.6 114 50.0
Cc02_g27780 Coffea canephora HOM05D003920 ORTHO05D017698 2.2e-07 60.8 34 79.4
arahy.Tifrunner.gnm1.ann1.RPY2B8 Arachis hypogaea HOM05D004014 ORTHO05D031593 3.7e-07 60.1 30 90.0
MBI17_g06171_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D017698 1.1e-06 58.5 75 45.3
QL93p2025_0050 Quercus lobata HOM05D003920 ORTHO05D337666 1.1e-06 58.5 31 80.6
BolC8t48153H Brassica oleracea HOM05D003920 ORTHO05D017698 1.4e-06 58.2 37 70.3
C08p21400 Brassica napus HOM05D003920 ORTHO05D017698 5.3e-06 56.2 32 78.1
BolC8t49779H Brassica oleracea HOM05D003920 ORTHO05D017698 6.9e-06 55.8 33 75.8
BraA08t34788Z Brassica rapa HOM05D003920 ORTHO05D017698 6.9e-06 55.8 33 75.8
QL05p013448 Quercus lobata HOM05D001342 ORTHO05D017698 9.1e-06 55.5 32 75.0


User provided reference genes

Program Settings