Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.4981 Avicennia marina HOM05D018604 ORTHO05D011584 2.0e-71 272.3 135 100.0
Migut.N01693 Erythranthe guttata HOM05D018604 ORTHO05D011584 1.3e-19 100.1 137 47.4
Lsat_1_v5_gn_4_41880 Lactuca sativa HOM05D018604 ORTHO05D011584 2.7e-12 75.9 119 42.9
Cc02_g26170 Coffea canephora HOM05D001218 ORTHO05D011584 7.9e-12 74.3 81 49.4
Dinv43989 Davidia involucrata HOM05D001218 ORTHO05D011584 1.3e-11 73.6 128 44.5
CiPaw.07G074600 Carya illinoinensis HOM05D001218 ORTHO05D011584 5.6e-10 68.2 57 64.9
Peaxi162Scf00901g00419 Petunia axillaris HOM05D018604 ORTHO05D011584 5.6e-10 68.2 104 46.2
Potri.006G024500 Populus trichocarpa HOM05D001218 ORTHO05D011584 7.4e-10 67.8 58 55.2
Actinidia30977 Actinidia chinensis HOM05D001218 ORTHO05D011584 1.1e-08 63.9 58 58.6
Ciclev10013226m.g Citrus clementina HOM05D001218 ORTHO05D011584 1.4e-08 63.5 58 53.4
Atru.chr8.848 Acer truncatum HOM05D001218 ORTHO05D011584 2.4e-08 62.8 58 62.1
SGA_v2.0_scaffold4G02205 Striga asiatica HOM05D018604 ORTHO05D011584 2.4e-08 62.8 130 34.6
ClCG09G001500 Citrullus lanatus HOM05D001218 ORTHO05D011584 3.1e-08 62.4 83 48.2
Sabra06G0017900 Salix brachista HOM05D001218 ORTHO05D011584 3.1e-08 62.4 58 50.0
Duzib235G1528 Durio zibethinus HOM05D001218 ORTHO05D011584 4.0e-08 62.0 58 55.2
Sed0002104 Sechium edule HOM05D001218 ORTHO05D011584 1.2e-07 60.5 81 50.6
MELO3C024296.2 Cucumis melo HOM05D001218 ORTHO05D011584 1.5e-07 60.1 58 56.9
GSVIVG01026761001 Vitis vinifera HOM05D001218 ORTHO05D011584 2.0e-07 59.7 49 59.2
Nn1g08050 Nelumbo nucifera HOM05D001218 ORTHO05D004088 3.4e-07 58.9 58 50.0
TAR375G0723 Trochodendron aralioides HOM05D001218 ORTHO05D004088 4.5e-07 58.5 58 50.0
Mapoly0105s0043 Marchantia polymorpha HOM05D001218 ORTHO05D004088 1.0e-06 57.4 49 51.0
COL.COLO4_30953 Corchorus olitorius HOM05D001218 ORTHO05D011584 1.3e-06 57.0 58 50.0
Thecc.06G138500 Theobroma cacao HOM05D001218 ORTHO05D011584 1.7e-06 56.6 44 54.5
Eucgr.E01760 Eucalyptus grandis HOM05D001218 ORTHO05D011584 2.2e-06 56.2 58 51.7
ECA234G3066 Erigeron canadensis HOM05D018604 ORTHO05D011584 2.9e-06 55.8 61 54.1
TWI12G0956 Tripterygium wilfordii HOM05D001218 ORTHO05D004088 4.9e-06 55.1 58 46.6
CsaV3_7G033830 Cucumis sativus L. HOM05D001218 ORTHO05D011584 6.5e-06 54.7 58 53.4
Peaxi162Scf00064g01432 Petunia axillaris HOM05D001218 ORTHO05D004088 6.5e-06 54.7 49 53.1
Zm00001eb252630 Zea mays HOM05D001218 ORTHO05D004088 6.5e-06 54.7 49 49.0
CDE10G0658 Ceratophyllum demersum HOM05D001218 ORTHO05D004088 8.4e-06 54.3 49 51.0
PSO210G1993 Papaver somniferum HOM05D001218 ORTHO05D004088 8.4e-06 54.3 48 52.1
PSO210G6488 Papaver somniferum HOM05D001218 ORTHO05D004088 8.4e-06 54.3 57 49.1
PGR042G3445 Punica granatum HOM05D018604 ORTHO05D011584 8.4e-06 54.3 58 46.6
TWI36G0968 Tripterygium wilfordii HOM05D001218 ORTHO05D004088 8.4e-06 54.3 58 48.3


User provided reference genes

Program Settings