Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 2.9e-123 445.3 229 100.0
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 2.0e-92 342.8 237 75.9
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 1.1e-85 320.5 227 74.0
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 1.4e-85 320.1 236 70.8
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 7.0e-77 291.2 229 65.5
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.7e-75 286.6 184 76.1
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 3.8e-75 285.4 185 75.7
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 5.0e-75 285.0 184 76.1
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 8.5e-75 284.3 222 66.2
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.4e-74 283.5 181 77.9
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 3.2e-74 282.3 227 63.4
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 6.1e-73 278.1 184 73.9
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 8.0e-73 277.7 225 65.3
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 3.0e-72 275.8 184 73.9
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 3.9e-72 275.4 182 72.0
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 3.9e-72 275.4 182 75.8
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 5.2e-72 275.0 184 71.7
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 1.1e-71 273.9 184 71.2
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 4.4e-71 271.9 217 61.8
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 4.4e-71 271.9 184 71.7
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 5.7e-71 271.6 184 70.7
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 5.7e-71 271.6 184 71.2
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 5.7e-71 271.6 219 63.5
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 9.7e-71 270.8 184 73.4
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 9.7e-71 270.8 184 72.3
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 9.7e-71 270.8 221 63.3
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 1.3e-70 270.4 196 70.9
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 1.7e-70 270.0 223 62.8
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 1.7e-70 270.0 211 66.8
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.7e-70 268.9 184 71.7
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 6.3e-70 268.1 175 77.7
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 6.3e-70 268.1 184 71.7
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 8.2e-70 267.7 223 62.3
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 1.1e-69 267.3 196 69.9
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.1e-69 267.3 184 71.7
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 1.4e-69 266.9 184 70.1
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 3.1e-69 265.8 193 71.0
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 4.1e-69 265.4 224 59.8
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 5.3e-69 265.0 212 63.7
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.6e-68 263.5 214 62.6
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 1.6e-68 263.5 198 68.2
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 2.0e-68 263.1 184 71.7
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 2.6e-68 262.7 213 64.8
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 4.5e-68 261.9 184 66.8
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 5.9e-68 261.5 181 72.9
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 7.7e-68 261.2 179 70.9
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 7.7e-68 261.2 184 66.3
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 1.0e-67 260.8 205 67.3
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 1.0e-67 260.8 184 70.1
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 1.3e-67 260.4 218 63.3
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 1.3e-67 260.4 195 66.2
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 2.2e-67 259.6 179 70.4
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 2.9e-67 259.2 179 70.4
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 2.9e-67 259.2 181 71.3
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 6.5e-67 258.1 184 71.2
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.1e-66 257.3 184 70.7
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 1.1e-66 257.3 186 68.8
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 1.1e-66 257.3 183 72.1
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 3.2e-66 255.8 178 71.9
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 3.2e-66 255.8 186 71.0
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 4.2e-66 255.4 184 70.7
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 9.4e-66 254.2 198 66.2
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 3.6e-65 252.3 215 60.5
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 3.6e-65 252.3 221 62.0
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 8.0e-65 251.1 198 65.2
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 1.0e-64 250.8 173 72.8
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 1.4e-64 250.4 226 60.2
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 1.4e-64 250.4 257 53.7
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 1.8e-64 250.0 226 58.0
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 4.0e-64 248.8 225 59.6
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 6.8e-64 248.1 184 66.8
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 6.8e-64 248.1 205 63.4
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 8.8e-64 247.7 227 57.7
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 2.6e-63 246.1 219 60.3
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 5.7e-63 245.0 219 60.3
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 2.2e-62 243.0 183 69.4
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 3.7e-62 242.3 219 60.3
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 6.3e-62 241.5 184 63.6
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 6.3e-62 241.5 184 64.1
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 2.0e-60 236.5 184 64.1
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 6.1e-57 224.9 173 65.9
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 1.0e-56 224.2 183 66.7
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 1.4e-56 223.8 184 63.0
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 6.8e-56 221.5 173 64.7
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 5.7e-55 218.4 275 45.8
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 2.7e-52 209.5 226 53.5
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.8e-51 205.7 206 56.8
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.8e-51 205.7 206 56.8
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 5.5e-50 201.8 187 59.4
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 5.5e-50 201.8 125 81.6
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 1.2e-49 200.7 125 75.2
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 8.0e-49 198.0 175 60.6
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 1.2e-47 194.1 146 64.4
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 2.0e-47 193.4 139 69.8
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.7e-46 190.3 195 57.4
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 1.8e-45 186.8 125 72.8
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.7e-43 180.3 119 75.6
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 3.9e-43 179.1 116 77.6
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 8.6e-43 177.9 156 64.1
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 1.5e-42 177.2 121 77.7
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 1.9e-42 176.8 124 68.5
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.5e-39 167.2 102 81.4
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 5.4e-37 158.7 155 54.2
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 2.7e-36 156.4 102 78.4
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 7.8e-36 154.8 154 54.5
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 5.6e-34 148.7 158 48.7
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.6e-33 147.1 103 70.9
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 5.8e-31 138.7 128 57.0
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 4.1e-29 132.5 98 69.4
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 4.6e-28 129.0 152 49.3
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 1.5e-23 114.0 90 60.0
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 9.2e-21 104.8 133 44.4
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 5.2e-16 89.0 165 35.8
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 6.4e-14 82.0 58 67.2
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 8.4e-14 81.6 46 78.3
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 4.2e-13 79.3 46 76.1
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 5.6e-10 68.9 83 49.4
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 6.2e-09 65.5 60 50.0
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 3.1e-08 63.2 46 63.0
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 3.4e-07 59.7 40 62.5
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 9.9e-07 58.2 104 38.5


User provided reference genes

Program Settings