Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 4.7e-114 414.5 199 100.0
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 1.2e-80 303.5 202 75.7
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 4.5e-80 301.6 199 72.9
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 5.7e-75 284.6 154 83.8
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 2.8e-74 282.3 154 81.8
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 1.8e-73 279.6 197 70.6
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 3.1e-73 278.9 146 84.9
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 4.1e-73 278.5 161 80.1
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 1.2e-72 276.9 154 80.5
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 2.6e-72 275.8 150 82.7
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 4.5e-72 275.0 180 72.2
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 5.9e-72 274.6 162 80.2
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 7.6e-72 274.2 161 78.9
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 1.0e-71 273.9 169 75.7
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 1.0e-71 273.9 159 79.9
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 1.7e-71 273.1 151 79.5
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 1.7e-71 273.1 150 82.0
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 2.2e-71 272.7 164 79.3
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.2e-71 272.7 164 78.7
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.2e-71 272.7 164 78.7
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 3.8e-71 271.9 152 81.6
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 3.8e-71 271.9 152 80.9
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 5.0e-71 271.6 168 74.4
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 5.0e-71 271.6 156 82.7
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 5.0e-71 271.6 153 81.0
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 6.5e-71 271.2 144 81.9
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 8.5e-71 270.8 173 76.3
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 8.5e-71 270.8 192 69.8
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 8.5e-71 270.8 143 83.2
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 1.9e-70 269.6 143 82.5
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 2.5e-70 269.2 205 66.3
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.5e-70 269.2 164 78.7
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 4.2e-70 268.5 160 77.5
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 5.5e-70 268.1 158 81.0
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 7.2e-70 267.7 143 82.5
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 1.2e-69 266.9 143 83.2
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 1.6e-69 266.5 173 72.8
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 1.6e-69 266.5 142 83.1
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 2.7e-69 265.8 147 81.6
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 6.1e-69 264.6 161 75.2
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 6.1e-69 264.6 151 80.8
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 1.0e-68 263.8 193 68.9
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 1.0e-68 263.8 143 81.8
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 1.3e-68 263.5 154 77.9
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 3.0e-68 262.3 160 76.2
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 6.7e-68 261.2 151 76.2
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 6.7e-68 261.2 159 74.2
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 8.7e-68 260.8 160 76.2
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 1.5e-67 260.0 160 76.2
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 1.5e-67 260.0 169 71.0
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 3.7e-66 255.4 158 72.8
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 3.7e-66 255.4 156 75.0
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 6.3e-66 254.6 143 78.3
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 6.3e-66 254.6 156 73.1
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 8.2e-66 254.2 155 74.2
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 2.4e-65 252.7 170 70.6
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 3.1e-65 252.3 190 64.2
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 3.1e-65 252.3 153 73.9
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 3.1e-65 252.3 143 79.0
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 5.3e-65 251.5 170 70.0
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 6.9e-65 251.1 167 68.3
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 1.2e-64 250.4 170 70.0
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 1.2e-64 250.4 161 74.5
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 2.0e-64 249.6 170 68.2
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 2.6e-64 249.2 170 68.8
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 2.6e-64 249.2 149 77.2
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 3.4e-64 248.8 170 69.4
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 3.4e-64 248.8 143 80.4
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 4.5e-64 248.4 152 71.7
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 5.9e-64 248.1 173 68.8
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 1.0e-63 247.3 153 73.9
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 1.0e-63 247.3 143 77.6
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 1.0e-63 247.3 156 69.2
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 2.2e-63 246.1 170 68.2
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 2.9e-63 245.7 187 65.2
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 5.0e-63 245.0 162 71.0
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 5.0e-63 245.0 162 71.0
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 5.0e-63 245.0 162 69.8
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 6.5e-63 244.6 183 64.5
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 8.5e-63 244.2 182 61.5
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 1.4e-62 243.4 142 76.8
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 5.5e-62 241.5 175 66.9
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 2.3e-60 236.1 129 81.4
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 2.0e-59 233.0 167 65.9
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 2.6e-59 232.6 143 72.0
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 6.3e-58 228.0 141 71.6
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 1.8e-57 226.5 151 67.5
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 1.0e-52 210.7 143 72.7
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 2.3e-52 209.5 216 52.3
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 5.2e-52 208.4 111 83.8
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 9.7e-51 204.1 143 67.8
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 1.3e-50 203.8 145 60.0
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 2.0e-48 196.4 105 88.6
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 4.5e-48 195.3 173 57.8
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 5.9e-48 194.9 144 65.3
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 3.8e-47 192.2 103 83.5
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 6.5e-47 191.4 143 60.8
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 3.0e-44 182.6 148 63.5
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 4.0e-44 182.2 103 78.6
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 5.2e-44 181.8 103 76.7
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 1.8e-41 173.3 149 59.1
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.3e-34 150.6 77 87.0
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 2.9e-31 139.4 82 72.0
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 3.7e-26 122.5 123 53.7
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 3.3e-22 109.4 142 41.5
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 5.7e-19 98.6 134 42.5
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 4.0e-12 75.9 41 80.5
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 3.7e-10 69.3 39 76.9


User provided reference genes

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