Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 8.0e-143 510.4 250 100.0
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 4.3e-96 355.1 232 70.7
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 1.9e-91 339.7 230 73.0
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 3.0e-89 332.4 235 67.2
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 2.5e-88 329.3 230 70.0
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 4.3e-88 328.6 250 66.0
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 9.6e-88 327.4 235 68.1
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.6e-87 326.6 237 67.5
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 1.5e-85 320.1 238 64.7
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 4.4e-85 318.5 241 64.7
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 1.7e-84 316.6 237 64.6
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 2.9e-84 315.8 233 64.8
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 1.1e-83 313.9 235 64.7
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 2.4e-83 312.8 240 66.2
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 3.2e-83 312.4 231 63.2
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 4.2e-83 312.0 231 63.2
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 7.1e-83 311.2 237 63.3
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 9.3e-83 310.8 231 64.9
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 6.0e-82 308.1 231 64.5
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 2.3e-81 306.2 234 62.4
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 5.1e-81 305.1 233 61.4
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 8.7e-81 304.3 236 64.4
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 2.5e-80 302.8 234 63.2
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 2.8e-79 299.3 240 61.7
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 3.6e-79 298.9 243 60.1
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 3.6e-79 298.9 234 64.1
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 1.4e-78 297.0 211 67.3
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 1.8e-78 296.6 236 61.0
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 4.0e-78 295.4 211 66.8
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 9.0e-78 294.3 236 61.0
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 2.1e-74 283.1 213 64.3
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 2.1e-74 283.1 207 65.2
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 3.5e-74 282.3 248 57.3
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 7.9e-74 281.2 236 58.1
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 1.0e-73 280.8 204 64.7
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 6.7e-73 278.1 236 58.1
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 6.7e-73 278.1 241 59.8
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 1.5e-72 276.9 239 56.9
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 3.3e-72 275.8 239 60.7
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 3.3e-72 275.8 241 58.9
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 4.3e-72 275.4 239 60.3
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 5.6e-72 275.0 230 59.1
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 9.6e-72 274.2 215 60.9
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 9.6e-72 274.2 233 59.7
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 1.6e-71 273.5 248 59.7
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 1.4e-70 270.4 192 67.2
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 3.1e-70 269.2 215 60.5
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 5.3e-70 268.5 242 57.4
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 9.0e-70 267.7 220 59.5
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 9.0e-70 267.7 213 59.6
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 9.9e-69 264.2 250 55.2
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.2e-68 263.1 250 56.4
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 3.8e-68 262.3 214 59.3
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 2.4e-67 259.6 239 56.1
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 5.5e-67 258.5 235 53.6
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 7.1e-67 258.1 262 53.8
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 1.2e-66 257.3 181 66.9
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 1.2e-66 257.3 229 55.9
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.6e-66 256.9 215 57.7
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.6e-66 256.9 215 57.7
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 7.9e-66 254.6 219 58.0
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 1.8e-65 253.4 233 52.8
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 8.7e-65 251.1 220 57.3
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 1.1e-64 250.8 228 55.7
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 1.5e-64 250.4 230 54.8
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 5.6e-64 248.4 231 53.2
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 9.6e-64 247.7 233 54.1
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 9.6e-64 247.7 231 54.1
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 2.1e-63 246.5 234 53.4
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 2.8e-63 246.1 277 48.7
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 3.7e-63 245.7 232 54.7
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 3.7e-63 245.7 184 63.0
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 4.8e-63 245.4 276 48.9
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 8.1e-63 244.6 236 54.7
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 8.1e-63 244.6 232 55.2
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 1.1e-62 244.2 181 61.9
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 1.4e-62 243.8 171 65.5
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 1.8e-62 243.4 229 56.3
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 3.1e-62 242.7 232 56.0
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 3.1e-62 242.7 229 56.3
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 3.4e-61 239.2 233 54.1
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 4.5e-61 238.8 231 53.7
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 7.9e-58 228.0 235 51.1
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 4.1e-54 215.7 238 48.7
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 5.3e-54 215.3 174 58.0
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 1.2e-53 214.2 213 53.1
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 1.2e-53 214.2 201 56.2
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 4.5e-53 212.2 151 63.6
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 1.8e-49 200.3 235 48.5
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 1.1e-48 197.6 171 59.1
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 1.5e-48 197.2 134 67.2
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 5.7e-48 195.3 177 55.4
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 5.7e-48 195.3 194 52.1
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 1.2e-45 187.6 208 51.0
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.2e-45 187.6 193 48.7
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 7.7e-45 184.9 174 52.9
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 1.7e-44 183.7 227 41.4
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 3.3e-40 169.5 151 57.0
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 1.3e-39 167.5 170 48.8
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 9.1e-38 161.4 141 58.9
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 3.4e-37 159.5 159 52.2
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 1.0e-33 147.9 207 39.6
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 1.4e-33 147.5 203 40.9
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 1.7e-31 140.6 93 65.6
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 1.8e-25 120.6 128 49.2
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 4.5e-21 105.9 60 73.3
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 5.9e-21 105.5 73 63.0
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.5e-19 100.9 69 71.0
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 1.2e-18 97.8 129 38.0
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 3.0e-17 93.2 78 65.4
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.1e-14 82.8 176 33.5
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 2.7e-13 80.1 80 48.8
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.5e-13 79.3 58 67.2
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 4.2e-11 72.8 96 45.8
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 9.5e-11 71.6 152 32.9
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 2.8e-10 70.1 176 27.8
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 2.3e-09 67.0 56 55.4
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 6.8e-09 65.5 37 67.6
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 4.4e-08 62.8 36 66.7
CAN.G1161.15 Capsicum annuum HOM05D000064 ORTHO05D007563 3.1e-06 56.6 41 58.5


User provided reference genes

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