Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 0.0e+00 1348.2 646 100.0
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 4.2e-305 1050.8 652 78.4
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 9.1e-292 1006.5 702 70.9
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 2.2e-277 958.7 599 75.6
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 3.7e-277 958.0 627 72.2
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 7.8e-275 950.3 649 69.6
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 1.7e-274 949.1 665 69.2
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 9.5e-273 943.3 565 76.1
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 1.2e-272 943.0 537 79.9
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 1.8e-271 939.1 646 69.5
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 2.3e-271 938.7 648 69.4
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 6.8e-271 937.2 621 72.0
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.2e-270 936.4 646 69.2
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 1.5e-270 936.0 644 69.3
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 3.4e-270 934.9 558 77.4
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 5.8e-270 934.1 646 69.3
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 5.8e-270 934.1 537 79.5
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 7.5e-270 933.7 687 66.5
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 2.2e-269 932.2 559 77.6
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 3.7e-269 931.4 649 69.0
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 4.1e-268 927.9 542 77.5
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 9.2e-268 926.8 552 76.6
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 4.6e-267 924.5 646 68.7
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 1.0e-266 923.3 692 66.2
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 3.9e-266 921.4 652 68.7
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 1.5e-265 919.5 634 69.4
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 1.5e-265 919.5 549 75.4
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 1.9e-265 919.1 645 68.7
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 1.9e-265 919.1 549 75.6
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 7.3e-265 917.1 552 76.8
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 7.3e-265 917.1 549 75.6
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 1.6e-264 916.0 549 74.7
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 3.6e-264 914.8 537 77.5
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 3.6e-264 914.8 541 75.6
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 6.2e-264 914.1 549 74.9
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 1.1e-263 913.3 597 71.4
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 3.4e-262 908.3 549 75.0
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 7.6e-262 907.1 564 74.1
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 9.9e-262 906.7 591 71.4
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 1.3e-261 906.4 537 75.6
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 2.9e-261 905.2 605 68.8
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 2.9e-261 905.2 605 68.8
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 3.7e-261 904.8 547 75.1
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 4.9e-261 904.4 540 75.6
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 4.9e-261 904.4 611 69.9
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 8.3e-261 903.7 643 67.5
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 1.9e-260 902.5 571 71.8
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 1.9e-260 902.5 583 70.8
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 5.4e-260 901.0 608 69.7
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 9.2e-260 900.2 643 65.5
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 2.7e-259 898.7 622 66.9
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 3.5e-259 898.3 613 69.2
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 3.5e-259 898.3 660 64.4
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 4.6e-259 897.9 570 71.1
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 1.3e-258 896.3 629 67.6
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 1.7e-258 896.0 711 62.4
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 2.3e-258 895.6 591 71.7
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 3.0e-258 895.2 549 74.5
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 5.1e-258 894.4 653 66.3
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 1.5e-257 892.9 599 69.9
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 7.3e-257 890.6 651 65.6
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 1.2e-256 889.8 613 70.1
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 1.2e-256 889.8 562 73.1
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 2.1e-256 889.0 617 68.1
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 4.7e-256 887.9 589 70.1
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 4.7e-256 887.9 552 72.8
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 2.4e-255 885.6 625 67.2
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 9.3e-252 873.6 514 76.1
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 1.2e-251 873.2 566 71.9
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 6.0e-251 870.9 627 66.2
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 1.3e-250 869.8 635 66.9
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 1.3e-250 869.8 606 70.0
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 1.3e-248 863.2 675 64.4
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 1.5e-246 856.3 568 70.6
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 2.1e-243 845.9 611 67.8
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 5.1e-242 841.3 625 65.8
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 3.8e-237 825.1 552 69.4
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 6.4e-237 824.3 633 62.2
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 2.4e-236 822.4 835 53.1
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 9.3e-236 820.5 490 74.9
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 1.6e-235 819.7 540 69.6
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 2.7e-235 818.9 876 51.0
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 2.3e-234 815.8 467 77.9
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 3.7e-232 808.5 651 62.5
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 4.8e-232 808.1 468 77.8
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 1.4e-231 806.6 652 62.7
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 5.1e-218 761.5 563 64.7
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 7.4e-217 757.7 432 78.2
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 1.5e-214 750.0 496 70.2
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 5.2e-194 681.8 550 58.5
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 1.8e-186 656.8 369 79.1
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 1.5e-180 637.1 526 59.7
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 8.0e-179 631.3 449 67.3
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 1.5e-172 610.5 586 53.8
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 2.0e-161 573.5 558 50.5
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 4.4e-161 572.4 441 61.0
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 9.8e-161 571.2 541 53.0
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 3.2e-159 566.2 553 49.7
Zm00001eb043590 Zea mays HOM05D006266 ORTHO05D008016 3.5e-150 536.2 350 71.1
Ah.07g202330 Amaranthus hybridus HOM05D006266 ORTHO05D008016 5.6e-132 475.7 422 59.5
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 4.4e-129 466.1 440 56.6
SEGI_14637 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.2e-111 406.8 297 67.3
Ah.07g202340 Amaranthus hybridus HOM05D006266 ORTHO05D008016 1.4e-93 348.2 201 73.6
Eucgr.L02537 Eucalyptus grandis HOM05D006266 ORTHO05D008016 5.3e-90 336.3 202 71.8
PGSC0003DMG400014944 Solanum tuberosum HOM05D006266 ORTHO05D008016 1.6e-78 298.1 172 75.6
FAN12G3251 Fragaria x ananassa HOM05D006266 ORTHO05D008016 6.1e-78 296.2 181 76.2
EL10Ac3g06005 Beta vulgaris HOM05D006266 ORTHO05D008016 3.0e-77 293.9 278 59.0
Cc03_g11980 Coffea canephora HOM05D006266 ORTHO05D008016 1.1e-76 292.0 173 79.8
Sopen02g004370 Solanum pennellii HOM05D006266 ORTHO05D008016 9.1e-74 282.3 177 76.8
SEGI_11902 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 4.7e-54 216.9 150 68.0
CSS0026769 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 4.6e-49 200.3 120 74.2
Os10g0516300 Oryza sativa ssp. japonica HOM05D006266 ORTHO05D008016 5.0e-48 196.8 116 74.1
CSS0016449 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.1e-46 191.4 106 84.9
CSS0001057 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.7e-33 147.9 127 59.8
SEGI_08796 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 3.5e-33 147.5 78 82.1
CSS0026763 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.5e-31 142.1 127 58.3
MELO3C006791.2 Cucumis melo HOM05D005231 ORTHO05D006387 8.1e-30 136.3 100 68.0
SEGI_29623 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 1.3e-27 129.0 107 63.6
CSS0001558 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 5.1e-24 117.1 112 55.4
CSS0004821 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 5.1e-24 117.1 112 55.4
CSS0016187 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 4.6e-17 94.0 70 68.6
arahy.Tifrunner.gnm1.ann1.QA6FBH Arachis hypogaea HOM05D006266 ORTHO05D008016 1.9e-15 88.6 56 75.0
CSS0026903 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 4.2e-10 70.9 56 55.4
CSS0019028 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 9.3e-10 69.7 41 75.6
CSS0008442 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 2.1e-09 68.6 39 76.9
CSS0022444 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 2.1e-09 68.6 39 76.9
Lsat_1_v5_gn_7_84681 Lactuca sativa HOM05D006266 ORTHO05D004407 2.1e-09 68.6 51 56.9
CSS0006121 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.9e-07 62.0 32 78.1
AUR62006021 Chenopodium quinoa HOM05D001494 ORTHO05D001364 3.3e-07 61.2 33 72.7


User provided reference genes

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