Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 1.5e-173 612.8 321 100.0
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 4.3e-109 398.7 292 71.2
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 4.5e-106 388.7 269 72.5
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 1.9e-104 383.3 270 73.3
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 4.2e-104 382.1 286 71.7
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 5.1e-102 375.2 289 69.6
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 4.3e-101 372.1 265 73.2
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 9.7e-101 370.9 272 69.5
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 4.8e-100 368.6 265 71.7
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 4.8e-100 368.6 277 69.3
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 8.2e-100 367.9 282 69.5
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 8.2e-100 367.9 282 69.5
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 1.4e-99 367.1 265 71.7
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 1.4e-99 367.1 279 68.1
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 1.8e-99 366.7 265 70.9
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 2.4e-99 366.3 265 71.3
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 3.1e-99 365.9 268 71.3
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 6.9e-99 364.8 281 69.0
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 1.2e-98 364.0 267 69.7
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 2.6e-98 362.8 290 66.9
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 2.6e-98 362.8 291 66.7
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 2.6e-98 362.8 289 66.1
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 2.6e-98 362.8 268 69.0
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 4.5e-98 362.1 270 70.0
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 4.5e-98 362.1 267 70.4
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 5.9e-98 361.7 267 69.7
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 5.9e-98 361.7 279 68.8
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 7.7e-98 361.3 266 69.5
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 7.7e-98 361.3 273 68.9
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 1.0e-97 360.9 268 69.8
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.7e-97 360.1 286 67.5
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 2.2e-97 359.8 273 68.5
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 2.9e-97 359.4 276 65.9
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 3.8e-97 359.0 273 65.6
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 5.0e-97 358.6 270 68.5
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 1.1e-96 357.5 290 65.5
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.1e-96 357.5 270 69.3
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.1e-96 357.5 289 65.4
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 1.1e-96 357.5 281 68.0
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 3.2e-96 355.9 270 68.1
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 4.2e-96 355.5 272 67.6
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 5.5e-96 355.1 273 67.8
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.2e-95 354.0 270 68.5
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 1.6e-95 353.6 270 67.4
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 7.9e-95 351.3 270 67.8
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 1.4e-94 350.5 267 67.8
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 1.4e-94 350.5 284 66.2
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 2.3e-94 349.7 270 62.2
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 2.3e-94 349.7 270 62.2
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 2.3e-94 349.7 270 62.2
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 3.9e-94 349.0 267 66.3
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 6.7e-94 348.2 396 50.5
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 8.8e-94 347.8 270 63.3
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 8.8e-94 347.8 272 64.3
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 5.7e-93 345.1 270 61.9
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 5.7e-93 345.1 347 57.3
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 7.4e-93 344.7 273 68.9
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 1.3e-92 344.0 267 64.8
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 1.3e-92 344.0 267 64.4
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 1.7e-92 343.6 270 62.2
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 8.2e-92 341.3 265 64.2
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 1.4e-91 340.5 265 66.4
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.8e-91 340.1 269 65.8
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 2.4e-91 339.7 267 63.3
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 4.1e-91 339.0 279 63.1
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 4.1e-91 339.0 268 65.7
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 5.3e-91 338.6 270 64.4
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 2.6e-90 336.3 267 62.9
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 3.5e-90 335.9 241 73.0
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 4.5e-90 335.5 269 65.1
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 7.7e-90 334.7 279 62.4
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 1.3e-89 334.0 244 71.7
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 2.2e-89 333.2 267 65.2
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 2.9e-89 332.8 267 62.9
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 2.9e-89 332.8 274 63.5
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 3.8e-89 332.4 260 65.4
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 6.5e-89 331.6 260 67.7
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 8.5e-89 331.3 277 63.9
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 2.5e-88 329.7 240 72.5
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 4.2e-88 328.9 270 61.1
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 9.4e-88 327.8 270 61.1
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 2.1e-87 326.6 284 62.0
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 2.7e-87 326.2 267 63.3
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 4.7e-87 325.5 281 61.6
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 1.8e-86 323.6 270 63.0
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 3.9e-86 322.4 272 64.0
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 5.2e-86 322.0 288 61.5
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 4.4e-85 318.9 269 62.8
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 5.7e-85 318.5 241 68.0
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 2.8e-84 316.2 269 61.3
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 3.7e-84 315.8 225 72.0
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 1.1e-83 314.3 271 60.5
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 1.8e-83 313.5 233 68.2
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 3.1e-83 312.8 263 60.5
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 3.8e-81 305.8 269 59.5
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 5.0e-81 305.4 269 59.5
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 1.9e-80 303.5 233 66.5
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 1.9e-80 303.5 267 59.2
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 7.2e-80 301.6 224 71.0
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.8e-78 297.0 262 61.5
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 6.1e-71 271.9 277 54.2
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 4.4e-69 265.8 286 52.8
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 1.4e-67 260.8 259 55.6
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 1.1e-64 251.1 230 59.1
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 3.7e-52 209.5 196 60.2
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 3.2e-51 206.5 150 72.7
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 2.7e-50 203.4 147 67.3
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 9.5e-48 194.9 182 61.0
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 3.1e-46 189.9 220 50.5
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.2e-43 178.3 154 59.7
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 1.1e-40 171.4 215 46.5
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 3.1e-38 163.3 121 69.4
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 5.8e-37 159.1 131 65.6
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 8.3e-36 155.2 132 55.3
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 2.3e-33 147.1 150 55.3
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 8.9e-30 135.2 120 62.5
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 2.0e-29 134.0 216 44.0
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.7e-28 131.0 131 60.3
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 2.1e-23 114.0 251 32.7
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.3e-20 104.8 81 67.9
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.2e-18 98.2 80 63.8
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 6.0e-10 69.3 109 39.4
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 8.1e-07 58.9 44 59.1


User provided reference genes

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