Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 5.0e-90 334.3 159 100.0
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 7.5e-46 187.6 142 67.6
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 4.6e-43 178.3 138 59.4
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 4.6e-35 151.8 145 55.9
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 4.0e-31 138.7 135 54.8
MSTRG.8114 Avicennia marina HOM05D007333 ORTHO05D008874 6.8e-31 137.9 109 62.4
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 2.0e-30 136.3 138 51.4
unitig_746.g26629 Utricularia gibba HOM05D007333 ORTHO05D008874 5.1e-26 121.7 131 50.4
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 5.6e-25 118.2 129 49.6
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 1.6e-24 116.7 129 45.7
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 2.1e-24 116.3 126 46.0
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 2.1e-24 116.3 126 46.0
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 3.6e-24 115.5 129 50.4
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 5.8e-22 108.2 127 44.1
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 2.7e-19 99.4 141 39.0
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 6.6e-18 94.7 145 37.9
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 5.6e-17 91.7 130 42.3
HanXRQChr14g0456271 Helianthus annuus HOM05D007333 ORTHO05D008874 4.8e-16 88.6 122 45.9
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 6.2e-16 88.2 114 45.6
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 8.1e-16 87.8 127 40.2
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 1.1e-15 87.4 102 44.1
vmacro10268 Vaccinium macrocarpon HOM05D007333 ORTHO05D008874 1.4e-15 87.0 131 36.6
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 4.0e-15 85.5 128 35.9
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 4.0e-15 85.5 141 37.6
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 5.3e-15 85.1 97 40.2
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 6.9e-15 84.7 128 35.2
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 9.0e-15 84.3 130 35.4
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 1.2e-14 84.0 130 35.4
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 1.2e-14 84.0 79 51.9
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 1.5e-14 83.6 124 40.3
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 1.5e-14 83.6 136 36.8
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 2.6e-14 82.8 140 40.7
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 2.6e-14 82.8 119 39.5
ECA238G3189 Erigeron canadensis HOM05D007333 ORTHO05D008874 4.4e-14 82.0 103 42.7
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 4.4e-14 82.0 116 40.5
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 5.8e-14 81.6 128 37.5
Actinidia34782 Actinidia chinensis HOM05D007333 ORTHO05D008874 7.6e-14 81.3 124 41.1
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 9.9e-14 80.9 137 38.0
TPR.G2540 Trifolium pratense HOM05D007333 ORTHO05D008874 9.9e-14 80.9 157 35.0
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 1.3e-13 80.5 66 56.1
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 2.2e-13 79.7 102 44.1
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 3.8e-13 79.0 122 42.6
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 3.8e-13 79.0 112 42.9
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 4.9e-13 78.6 122 42.6
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 6.4e-13 78.2 108 42.6
Lsat_1_v5_gn_2_102881 Lactuca sativa HOM05D007333 ORTHO05D008874 6.4e-13 78.2 137 37.2
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 8.4e-13 77.8 139 36.0
Glyma.10G201500 Glycine max HOM05D007333 ORTHO05D008874 1.1e-12 77.4 138 36.2
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 1.1e-12 77.4 133 34.6
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 1.4e-12 77.0 129 38.0
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 1.4e-12 77.0 122 41.8
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 1.9e-12 76.6 147 34.7
Actinidia38900 Actinidia chinensis HOM05D007333 ORTHO05D008874 3.2e-12 75.9 125 39.2
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 4.2e-12 75.5 144 33.3
ECA233G0976 Erigeron canadensis HOM05D007333 ORTHO05D008874 5.4e-12 75.1 73 53.4
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 7.1e-12 74.7 100 44.0
Aqoxy2G01500 Aquilegia oxysepala HOM05D007333 ORTHO05D008874 9.3e-12 74.3 131 34.4
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 1.6e-11 73.6 94 37.2
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 1.6e-11 73.6 119 40.3
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 1.6e-11 73.6 72 48.6
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 2.1e-11 73.2 70 45.7
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 2.1e-11 73.2 126 37.3
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 2.1e-11 73.2 122 41.8
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 4.6e-11 72.0 132 30.3
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 6.0e-11 71.6 142 33.1
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 6.0e-11 71.6 141 36.9
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 6.0e-11 71.6 132 30.3
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 6.0e-11 71.6 147 34.0
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 6.0e-11 71.6 98 43.9
Aa31LG10G7320 Aethionema arabicum HOM05D007333 ORTHO05D008874 7.9e-11 71.2 118 38.1
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 7.9e-11 71.2 104 43.3
VMungo0720G1448 Vigna mungo HOM05D007333 ORTHO05D008874 7.9e-11 71.2 128 33.6
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.0e-10 70.9 132 30.3
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.0e-10 70.9 132 31.1
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 1.0e-10 70.9 102 39.2
Glyma.20G188900 Glycine max HOM05D007333 ORTHO05D008874 1.7e-10 70.1 76 44.7
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 1.7e-10 70.1 134 31.3
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 2.3e-10 69.7 111 37.8
BraA09t39992Z Brassica rapa HOM05D007333 ORTHO05D008874 2.3e-10 69.7 105 38.1
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 2.3e-10 69.7 63 50.8
AL5G32820 Arabidopsis lyrata HOM05D007333 ORTHO05D008874 3.0e-10 69.3 121 36.4
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 3.0e-10 69.3 79 46.8
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 3.0e-10 69.3 74 45.9
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 5.1e-10 68.6 63 57.1
CARHR162000 Cardamine hirsuta HOM05D007333 ORTHO05D008874 6.6e-10 68.2 115 35.7
A09p45290 Brassica napus HOM05D007333 ORTHO05D008874 8.7e-10 67.8 102 36.3
AT3G52230 Arabidopsis thaliana HOM05D007333 ORTHO05D008874 2.5e-09 66.2 105 39.0
CSS0002382 Camellia sinensis var. sinensis HOM05D007333 ORTHO05D008874 2.5e-09 66.2 100 40.0
Psat6g175280 Pisum sativum HOM05D007333 ORTHO05D008874 2.5e-09 66.2 128 32.0
PSO339G5821 Papaver somniferum HOM05D007333 ORTHO05D008874 3.3e-09 65.9 82 40.2
Phvul.007G105600 Phaseolus vulgaris HOM05D007333 ORTHO05D008874 4.3e-09 65.5 72 47.2
Thhalv10010807m.g Eutrema salsugineum HOM05D007333 ORTHO05D008874 5.6e-09 65.1 122 32.0
A04p07130 Brassica napus HOM05D007333 ORTHO05D008874 3.6e-08 62.4 49 53.1
Sabra10G0181000 Salix brachista HOM05D007333 ORTHO05D008874 4.8e-08 62.0 147 28.6
Nn2g13958 Nelumbo nucifera HOM05D007333 ORTHO05D008874 1.4e-07 60.5 49 46.9
SEGI_06473 Sequoiadendron giganteum HOM05D007333 ORTHO05D008874 3.1e-07 59.3 77 41.6
HPP92_009761 Vanilla planifolia HOM05D065211 ORTHO05D008874 3.1e-07 59.3 60 43.3


User provided reference genes

Program Settings