Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.3900 Avicennia marina HOM05D007614 ORTHO05D009538 1.8e-271 938.7 487 100.0
SalBow2G0719 Salvia bowleyana HOM05D007614 ORTHO05D009538 3.1e-175 619.0 490 68.6
SGA_v2.0_scaffold67G22611 Striga asiatica HOM05D007614 ORTHO05D009538 5.5e-164 581.6 490 65.7
Oeu006410.1 Olea europaea HOM05D007614 ORTHO05D009538 2.2e-149 533.1 469 62.5
Migut.G00137 Erythranthe guttata HOM05D007614 ORTHO05D009538 6.5e-149 531.6 465 64.3
Dinv29737 Davidia involucrata HOM05D007614 ORTHO05D009538 8.2e-136 488.0 487 54.2
GSVIVG01035126001 Vitis vinifera HOM05D007614 ORTHO05D009538 4.2e-132 475.7 476 54.4
CSS0029892 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 2.6e-129 466.5 476 53.4
Cc03_g01650 Coffea canephora HOM05D007614 ORTHO05D009538 1.1e-127 461.1 490 52.9
QL06p010082 Quercus lobata HOM05D007614 ORTHO05D009538 1.7e-125 453.8 490 50.6
Nitab4.5_0000513g0110 Nicotiana tabacum HOM05D007614 ORTHO05D009538 9.5e-124 448.0 481 53.4
Nitab4.5_0002628g0040 Nicotiana tabacum HOM05D007614 ORTHO05D009538 2.3e-122 443.4 482 53.1
CSS0000522 Camellia sinensis var. sinensis HOM05D007614 ORTHO05D009538 6.8e-122 441.8 476 51.3
Lj3C822G9 Lonicera japonica HOM05D007614 ORTHO05D009538 7.5e-121 438.3 474 53.4
Peaxi162Scf00065g01533 Petunia axillaris HOM05D007614 ORTHO05D009538 9.8e-121 438.0 483 52.0
Sopen01g028150 Solanum pennellii HOM05D007614 ORTHO05D009538 6.3e-120 435.3 489 51.7
Solyc01g066610.4 Solanum lycopersicum HOM05D007614 ORTHO05D009538 8.3e-120 434.9 489 51.3
CiPaw.02G080700 Carya illinoinensis HOM05D007614 ORTHO05D009538 1.1e-119 434.5 476 48.9
Haze_01174 Corylus avellana HOM05D007614 ORTHO05D009538 5.4e-119 432.2 476 49.6
Cfa015415 Carpinus fangiana HOM05D007614 ORTHO05D009538 9.2e-119 431.4 476 49.2
TAR365G0799 Trochodendron aralioides HOM05D007614 ORTHO05D009538 2.8e-115 419.9 498 48.4
Ciclev10004153m.g Citrus clementina HOM05D007614 ORTHO05D009538 3.7e-112 409.5 450 51.1
MD13G1166500 Malus domestica HOM05D007614 ORTHO05D009538 5.9e-110 402.1 489 47.0
MBI19_g34788_MAGBIO Magnolia biondii HOM05D007614 ORTHO05D009538 1.1e-108 397.9 480 47.1
Thecc.04G287600 Theobroma cacao HOM05D007614 ORTHO05D009538 3.3e-108 396.4 469 47.3
TWI73G0642 Tripterygium wilfordii HOM05D007614 ORTHO05D009538 1.2e-107 394.4 479 48.2
Prupe.1G132900 Prunus persica HOM05D007614 ORTHO05D009538 2.8e-107 393.3 468 47.0
FAN17G0278 Fragaria x ananassa HOM05D007614 ORTHO05D009538 3.6e-107 392.9 472 47.9
RcHm_v2.0_Chr4g0423071 Rosa chinensis HOM05D007614 ORTHO05D009538 8.0e-107 391.7 472 48.1
Duzib151G0258 Durio zibethinus HOM05D007614 ORTHO05D009538 4.0e-106 389.4 469 47.1
Atru.chr6.1993 Acer truncatum HOM05D007614 ORTHO05D009538 6.8e-106 388.7 490 46.9
FvH4_4g18510 Fragaria vesca HOM05D007614 ORTHO05D009538 2.0e-105 387.1 472 47.7
Aqoxy2G02920 Aquilegia oxysepala HOM05D007614 ORTHO05D009538 4.4e-105 386.0 498 44.2
Nn3g21526 Nelumbo nucifera HOM05D007614 ORTHO05D009538 5.8e-105 385.6 495 46.1
FAN07G2176 Fragaria x ananassa HOM05D007614 ORTHO05D009538 7.5e-105 385.2 472 47.2
FAN12G3001 Fragaria x ananassa HOM05D007614 ORTHO05D009538 1.3e-104 384.4 470 47.4
Potri.010G011800 Populus trichocarpa HOM05D007614 ORTHO05D009538 1.3e-104 384.4 491 45.6
FAN12G0400 Fragaria x ananassa HOM05D007614 ORTHO05D009538 4.9e-104 382.5 472 47.5
PGSC0003DMG400011332 Solanum tuberosum HOM05D007614 ORTHO05D009538 1.9e-103 380.6 449 49.9
Gorai.006G076700 Gossypium raimondii HOM05D007614 ORTHO05D009538 3.5e-102 376.3 471 46.1
Sabra10G0007500 Salix brachista HOM05D007614 ORTHO05D009538 1.0e-101 374.8 469 44.3
Gohir.D09G062000 Gossypium hirsutum HOM05D007614 ORTHO05D009538 3.3e-100 369.8 471 44.8
CANSAT78G1530 Cannabis sativa HOM05D007614 ORTHO05D009538 9.5e-100 368.2 496 43.3
Gohir.A09G063000 Gossypium hirsutum HOM05D007614 ORTHO05D009538 3.1e-98 363.2 471 44.6
DCAR_027058 Daucus carota HOM05D007614 ORTHO05D009538 4.0e-98 362.8 487 43.3
PGR031G0733 Punica granatum HOM05D007614 ORTHO05D009538 7.1e-95 352.1 471 43.1
PSO407G0339 Papaver somniferum HOM05D007614 ORTHO05D009538 3.9e-93 346.3 483 42.9
THA.LOC104827336 Tarenaya hassleriana HOM05D007614 ORTHO05D009538 3.1e-90 336.7 453 42.8
Thhalv10003518m.g Eutrema salsugineum HOM05D007614 ORTHO05D009538 4.0e-90 336.3 492 40.7
Sc13g0003320 Simmondsia chinensis HOM05D007614 ORTHO05D009538 6.8e-90 335.5 489 40.7
CARHR182630 Cardamine hirsuta HOM05D007614 ORTHO05D009538 1.4e-87 327.8 490 40.4
AT5G49110 Arabidopsis thaliana HOM05D007614 ORTHO05D009538 1.3e-85 321.2 490 38.8
AL8G22620 Arabidopsis lyrata HOM05D007614 ORTHO05D009538 2.3e-85 320.5 453 40.4
COL.COLO4_37910 Corchorus olitorius HOM05D007614 ORTHO05D009538 1.1e-84 318.2 473 41.9
BcaB07g34217 Brassica carinata HOM05D007614 ORTHO05D009538 2.8e-83 313.5 492 39.8
A02p37890 Brassica napus HOM05D007614 ORTHO05D009538 2.4e-82 310.5 489 38.7
C02p57050 Brassica napus HOM05D007614 ORTHO05D009538 9.0e-82 308.5 489 38.9
BolC2t11775H Brassica oleracea HOM05D007614 ORTHO05D009538 9.0e-82 308.5 489 38.9
ECA240G3304 Erigeron canadensis HOM05D007614 ORTHO05D009538 9.9e-81 305.1 473 41.6
BraA02t08773Z Brassica rapa HOM05D007614 ORTHO05D009538 1.7e-80 304.3 500 37.8
Lsat_1_v5_gn_6_96381 Lactuca sativa HOM05D007614 ORTHO05D009538 6.0e-78 295.8 487 39.6
CDE01G0153 Ceratophyllum demersum HOM05D007614 ORTHO05D009538 6.6e-77 292.4 451 39.2
ATR0796G125 Amborella trichopoda HOM05D007614 ORTHO05D009538 4.9e-72 276.2 456 39.0
SEGI_15090 Sequoiadendron giganteum HOM05D007614 ORTHO05D009538 1.0e-69 268.5 463 36.3
Eucgr.B01588 Eucalyptus grandis HOM05D007614 ORTHO05D009538 4.8e-59 233.0 376 39.9
HPP92_013726 Vanilla planifolia HOM05D007614 ORTHO05D009538 6.9e-58 229.2 494 33.8
BcaC03g17700 Brassica carinata HOM05D007614 ORTHO05D009538 2.6e-57 227.3 474 33.5
CAN.G421.11 Capsicum annuum HOM05D007614 ORTHO05D009538 2.1e-54 217.6 276 46.0
BcaC03g17697 Brassica carinata HOM05D007614 ORTHO05D009538 1.8e-53 214.5 249 46.6
HanXRQChr03g0089481 Helianthus annuus HOM05D007614 ORTHO05D009538 6.3e-51 206.1 213 54.5
Manes.03G197500 Manihot esculenta HOM05D007614 ORTHO05D009538 6.9e-50 202.6 318 40.9
Zm00001eb016350 Zea mays HOM05D007614 ORTHO05D009538 4.5e-49 199.9 414 33.3
Mapoly0051s0073 Marchantia polymorpha HOM05D007614 ORTHO05D009538 1.3e-45 188.3 421 32.8
Pp3c13_17960 Physcomitrium patens HOM05D007614 ORTHO05D009538 1.4e-42 178.3 406 33.7
CAN.G421.12 Capsicum annuum HOM05D007614 ORTHO05D009538 9.1e-42 175.6 171 59.1
AagrBONN_evm.TU.Sc2ySwM_344.1702 Anthoceros agrestis HOM05D007614 ORTHO05D009538 2.1e-38 164.5 461 31.0
AagrBONN_evm.TU.Sc2ySwM_344.1704 Anthoceros agrestis HOM05D007614 ORTHO05D009538 2.1e-38 164.5 461 31.0
Cpa.g.c41899 Carica papaya HOM05D007614 ORTHO05D009538 1.7e-35 154.8 121 62.8
Cc01_g15100 Coffea canephora HOM05D007614 ORTHO05D009538 2.7e-30 137.5 105 66.7
Cpa.g.sc16.197 Carica papaya HOM05D007614 ORTHO05D009538 3.0e-29 134.0 259 37.1
CBR_g12376 Chara braunii HOM05D007614 ORTHO05D009538 2.4e-26 124.4 332 24.4
HanXRQChr03g0089471 Helianthus annuus HOM05D007614 ORTHO05D009538 1.6e-25 121.7 268 33.6
BcaC03g17696 Brassica carinata HOM05D007614 ORTHO05D009538 8.0e-14 82.8 174 35.6
Zm00001eb167500 Zea mays HOM05D000563 ORTHO05D009538 1.2e-12 79.0 77 55.8
Actinidia14287 Actinidia chinensis HOM05D065619 ORTHO05D037991 1.5e-12 78.6 87 46.0
Eucgr.B01587 Eucalyptus grandis HOM05D007614 ORTHO05D009538 1.7e-08 65.1 55 50.9


User provided reference genes

Program Settings