Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 2.2e-98 362.5 208 100.0
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.5e-38 163.7 168 53.6
Migut.H02321 Erythranthe guttata HOM05D004728 ORTHO05D002375 5.1e-26 122.1 195 49.7
SGA_v2.0_scaffold115G32157 Striga asiatica HOM05D004728 ORTHO05D002375 1.5e-25 120.6 219 47.0
SalBow3G1954 Salvia bowleyana HOM05D004728 ORTHO05D002375 3.3e-25 119.4 207 48.3
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 3.4e-22 109.4 148 49.3
Oeu002157.4 Olea europaea HOM05D004728 ORTHO05D002375 1.7e-21 107.1 205 44.9
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 3.2e-20 102.8 123 55.3
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.2e-20 102.8 123 55.3
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.2e-20 102.8 123 56.1
Oeu049688.1 Olea europaea HOM05D004728 ORTHO05D002375 1.3e-16 90.9 154 48.7
Cc07_g14530 Coffea canephora HOM05D004728 ORTHO05D002375 1.6e-16 90.5 156 44.2
Sopen05g029860 Solanum pennellii HOM05D000436 ORTHO05D001944 1.6e-16 90.5 189 43.4
Dinv13237 Davidia involucrata HOM05D004728 ORTHO05D002375 2.8e-16 89.7 237 36.7
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 2.6e-14 83.2 151 31.1
Solyc05g051450.2 Solanum lycopersicum HOM05D019315 ORTHO05D002375 2.6e-14 83.2 168 43.5
Nitab4.5_0002996g0010 Nicotiana tabacum HOM05D019315 ORTHO05D002375 4.5e-14 82.4 210 37.6
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 7.6e-14 81.6 180 33.3
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 3.8e-13 79.3 175 30.9
FAN26G2532 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.1e-12 77.8 148 41.2
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 1.2e-11 74.3 143 36.4
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 2.1e-11 73.6 133 43.6
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 6.0e-11 72.0 149 28.9
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 7.9e-11 71.6 140 40.7
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 3.9e-10 69.3 137 31.4
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 5.1e-10 68.9 125 41.6
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 6.7e-10 68.6 114 45.6
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 6.7e-10 68.6 154 37.7
Peaxi162Scf00044g01721 Petunia axillaris HOM05D019315 ORTHO05D002375 6.7e-10 68.6 199 37.7
Aqoxy476s001 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.1e-09 67.8 162 39.5
Aqoxy6G00704 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.5e-09 67.4 194 36.6
MD15G1317800 Malus domestica HOM05D004728 ORTHO05D002375 1.5e-09 67.4 139 42.4
TAR376G0441 Trochodendron aralioides HOM05D004728 ORTHO05D002375 1.5e-09 67.4 122 43.4
GSVIVG01003435001 Vitis vinifera HOM05D004728 ORTHO05D002375 1.5e-09 67.4 187 29.4
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.9e-09 67.0 134 38.1
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 1.9e-09 67.0 118 38.1
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 2.5e-09 66.6 207 25.6
Nitab4.5_0000128g0190 Nicotiana tabacum HOM05D019315 ORTHO05D002375 2.5e-09 66.6 209 34.9
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.3e-09 66.2 134 37.3
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.3e-09 66.2 134 37.3
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 3.3e-09 66.2 116 33.6
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 7.4e-09 65.1 160 28.1
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 9.6e-09 64.7 118 34.7
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 9.6e-09 64.7 132 43.9
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 9.6e-09 64.7 215 34.9
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 1.3e-08 64.3 125 38.4
Lsat_1_v5_gn_1_2940 Lactuca sativa HOM05D004728 ORTHO05D002375 1.6e-08 63.9 122 34.4
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 3.7e-08 62.8 138 42.8
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 3.7e-08 62.8 126 38.9
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 3.7e-08 62.8 181 35.4
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 4.8e-08 62.4 132 37.9
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 1.1e-07 61.2 137 36.5
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 1.1e-07 61.2 131 37.4
Lsat_1_v5_gn_1_2860 Lactuca sativa HOM05D004728 ORTHO05D002375 1.1e-07 61.2 128 38.3
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 1.4e-07 60.8 124 38.7
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 1.4e-07 60.8 134 37.3
Prupe.6G194000 Prunus persica HOM05D004728 ORTHO05D002375 1.8e-07 60.5 71 59.2
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 3.1e-07 59.7 132 40.2
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 3.1e-07 59.7 125 39.2
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 3.1e-07 59.7 127 40.2
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 4.0e-07 59.3 206 35.0
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 5.3e-07 58.9 131 37.4
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 9.0e-07 58.2 135 38.5
arahy.Tifrunner.gnm1.ann1.RDUL0C Arachis hypogaea HOM05D012119 ORTHO05D002375 1.5e-06 57.4 142 38.0
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 1.5e-06 57.4 128 36.7
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 1.5e-06 57.4 116 44.0
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 1.5e-06 57.4 111 39.6
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 1.5e-06 57.4 132 34.1
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 1.5e-06 57.4 197 33.5
arahy.Tifrunner.gnm1.ann1.9U5DT8 Arachis hypogaea HOM05D012119 ORTHO05D002375 2.0e-06 57.0 134 38.8
Lsat_1_v5_gn_9_73380 Lactuca sativa HOM05D004728 ORTHO05D002375 2.0e-06 57.0 143 36.4
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 2.6e-06 56.6 106 33.0
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 2.6e-06 56.6 124 26.6
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 2.6e-06 56.6 104 43.3
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 3.4e-06 56.2 141 39.0
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 3.4e-06 56.2 121 28.9
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 3.4e-06 56.2 119 40.3
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 4.5e-06 55.8 132 38.6
Lsat_1_v5_gn_9_73501 Lactuca sativa HOM05D004728 ORTHO05D002375 4.5e-06 55.8 151 35.1
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 5.8e-06 55.5 109 29.4
SalBow3G2423 Salvia bowleyana HOM05D004728 ORTHO05D002375 9.9e-06 54.7 89 55.1


User provided reference genes

Program Settings