Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.3702 Avicennia marina HOM05D008015 ORTHO05D009180 7.9e-112 407.1 207 100.0
Oeu032314.1 Olea europaea HOM05D008015 ORTHO05D009180 2.2e-29 133.3 180 47.8
SGA_v2.0_scaffold45G17152 Striga asiatica HOM05D008015 ORTHO05D009180 3.5e-27 125.9 191 44.0
TAR371G1005 Trochodendron aralioides HOM05D008015 ORTHO05D009180 2.3e-26 123.2 164 46.3
SalBow5G5173 Salvia bowleyana HOM05D008015 ORTHO05D009180 1.8e-23 113.6 169 45.6
CSS0018355 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 2.3e-23 113.2 170 43.5
Nn4g24386 Nelumbo nucifera HOM05D008015 ORTHO05D009180 2.3e-23 113.2 199 43.2
CSS0009801 Camellia sinensis var. sinensis HOM05D008015 ORTHO05D009180 3.1e-23 112.8 170 43.5
Cc07_g13270 Coffea canephora HOM05D008015 ORTHO05D009180 6.8e-23 111.7 180 40.6
Lalb_Chr15g0084981 Lupinus albus HOM05D008015 ORTHO05D009180 6.8e-23 111.7 173 43.9
Cfa007792 Carpinus fangiana HOM05D008015 ORTHO05D009180 1.2e-22 110.9 166 42.2
Lalb_Chr18g0053531 Lupinus albus HOM05D008015 ORTHO05D009180 4.4e-22 109.0 191 38.7
MBI13_g45895_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 4.4e-22 109.0 188 42.6
Potri.004G085100 Populus trichocarpa HOM05D008015 ORTHO05D009180 9.9e-22 107.8 167 43.1
QL02p059324 Quercus lobata HOM05D008015 ORTHO05D009180 9.9e-22 107.8 183 39.9
MD09G1270500 Malus domestica HOM05D008015 ORTHO05D009180 4.1e-20 102.4 222 38.3
Glyma.14G213100 Glycine max HOM05D008015 ORTHO05D009180 5.4e-20 102.1 173 38.7
Actinidia28799 Actinidia chinensis HOM05D008015 ORTHO05D009180 7.1e-20 101.7 183 40.4
Ciclev10012847m.g Citrus clementina HOM05D008015 ORTHO05D009180 1.6e-19 100.5 192 38.0
LjContig00141g0001505 Lotus japonicus HOM05D008015 ORTHO05D009180 2.1e-19 100.1 162 40.7
Prupe.3G166400 Prunus persica HOM05D008015 ORTHO05D009180 4.6e-19 99.0 226 38.5
Actinidia35723 Actinidia chinensis HOM05D008015 ORTHO05D009180 7.8e-19 98.2 177 40.1
MBI13_g14024_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 7.8e-19 98.2 189 36.5
Duzib268G1603 Durio zibethinus HOM05D008015 ORTHO05D009180 1.3e-18 97.4 195 37.9
Potri.017G131300 Populus trichocarpa HOM05D008015 ORTHO05D009180 2.3e-18 96.7 172 39.5
VMungo0647G1978 Vigna mungo HOM05D008015 ORTHO05D009180 3.0e-18 96.3 169 39.1
Medtr3g065210 Medicago truncatula HOM05D008015 ORTHO05D009180 6.6e-18 95.1 164 42.7
RcHm_v2.0_Chr3g0491241 Rosa chinensis HOM05D008015 ORTHO05D009180 2.5e-17 93.2 224 35.3
Rhsim10G0178500 Rhododendron simsii HOM05D008015 ORTHO05D009180 5.6e-17 92.0 203 36.9
TPR.G30001 Trifolium pratense HOM05D008015 ORTHO05D009180 5.6e-17 92.0 166 38.0
Cpa.g.sc340.4 Carica papaya HOM05D008015 ORTHO05D009180 1.6e-16 90.5 194 38.1
CiPaw.03G073500 Carya illinoinensis HOM05D008015 ORTHO05D009180 1.6e-16 90.5 173 37.6
Manes.02G078100 Manihot esculenta HOM05D008015 ORTHO05D009180 1.6e-16 90.5 186 38.7
TAR629G2519 Trochodendron aralioides HOM05D008015 ORTHO05D009180 1.1e-15 87.8 168 39.3
Migut.K00921 Erythranthe guttata HOM05D008015 ORTHO05D009180 1.4e-15 87.4 188 40.4
Nn3g18370 Nelumbo nucifera HOM05D008015 ORTHO05D009180 1.4e-15 87.4 118 46.6
MBI19_g08383_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 1.8e-15 87.0 155 40.6
Eucgr.F02874 Eucalyptus grandis HOM05D008015 ORTHO05D009180 2.4e-15 86.7 183 32.8
FAN23G1273 Fragaria x ananassa HOM05D008015 ORTHO05D009180 2.4e-15 86.7 215 33.5
Glyma.18G041300 Glycine max HOM05D008015 ORTHO05D009180 5.2e-15 85.5 134 40.3
Sabra17G0109400 Salix brachista HOM05D008015 ORTHO05D009180 6.8e-15 85.1 174 37.9
Lalb_Chr17g0346041 Lupinus albus HOM05D008015 ORTHO05D009180 1.2e-14 84.3 148 38.5
Sed0025761 Sechium edule HOM05D008015 ORTHO05D009180 1.2e-14 84.3 176 35.8
CDE05G0668 Ceratophyllum demersum HOM05D006178 ORTHO05D007504 1.5e-14 84.0 149 38.9
Lsat_1_v5_gn_8_114880 Lactuca sativa HOM05D008015 ORTHO05D009180 2.0e-14 83.6 175 35.4
Medtr5g077940 Medicago truncatula HOM05D008015 ORTHO05D009180 2.0e-14 83.6 191 35.1
MELO3C022825.2 Cucumis melo HOM05D008015 ORTHO05D009180 2.6e-14 83.2 178 36.0
FAN26G1918 Fragaria x ananassa HOM05D008015 ORTHO05D009180 2.6e-14 83.2 215 33.5
Thecc.04G053900 Theobroma cacao HOM05D008015 ORTHO05D009180 2.6e-14 83.2 182 36.8
TWI77G0273 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 7.6e-14 81.6 157 37.6
PSO478G3758 Papaver somniferum HOM05D008015 ORTHO05D009180 2.2e-13 80.1 180 37.2
CANSAT35G1526 Cannabis sativa HOM05D008015 ORTHO05D009180 2.9e-13 79.7 180 35.6
ATR0753G067 Amborella trichopoda HOM05D008015 ORTHO05D009180 6.4e-13 78.6 194 30.9
CDE05G1037 Ceratophyllum demersum HOM05D008015 ORTHO05D009180 1.4e-12 77.4 149 36.2
ClCG03G008850 Citrullus lanatus HOM05D008015 ORTHO05D009180 3.2e-12 76.3 159 36.5
Phvul.001G229400 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 3.2e-12 76.3 140 37.9
DCAR_014163 Daucus carota HOM05D008015 ORTHO05D009180 4.2e-12 75.9 182 35.7
FvH4_1g30203 Fragaria vesca HOM05D008015 ORTHO05D009180 4.2e-12 75.9 97 45.4
Phvul.008G237600 Phaseolus vulgaris HOM05D008015 ORTHO05D009180 9.2e-12 74.7 136 36.8
VMungo1383G2632 Vigna mungo HOM05D008015 ORTHO05D009180 9.2e-12 74.7 116 41.4
Actinidia17202 Actinidia chinensis HOM05D008015 ORTHO05D009180 1.2e-11 74.3 154 36.4
Gohir.D07G078200 Gossypium hirsutum HOM05D008015 ORTHO05D009180 1.6e-11 73.9 166 38.0
MBI13_g24899_MAGBIO Magnolia biondii HOM05D008015 ORTHO05D009180 1.6e-11 73.9 77 53.2
Aqoxy1G02179 Aquilegia oxysepala HOM05D008015 ORTHO05D009180 2.7e-11 73.2 184 38.6
Gorai.001G082600 Gossypium raimondii HOM05D008015 ORTHO05D009180 2.7e-11 73.2 166 38.0
Glyma.11G215300 Glycine max HOM05D008015 ORTHO05D009180 4.6e-11 72.4 117 40.2
CsaV3_5G023910 Cucumis sativus L. HOM05D009275 ORTHO05D009180 1.0e-10 71.2 167 34.7
unitig_32.g11793 Utricularia gibba HOM05D008015 ORTHO05D009180 1.0e-10 71.2 181 33.1
Gohir.A07G073500 Gossypium hirsutum HOM05D008015 ORTHO05D009180 1.7e-10 70.5 165 34.5
FAN19G3187 Fragaria x ananassa HOM05D008015 ORTHO05D009180 3.0e-10 69.7 198 32.3
Psat2g045760 Pisum sativum HOM05D008015 ORTHO05D009180 5.1e-10 68.9 158 34.2
TWI74G1025 Tripterygium wilfordii HOM05D008015 ORTHO05D009180 7.3e-09 65.1 145 35.2
COL.COLO4_13422 Corchorus olitorius HOM05D009275 ORTHO05D009180 6.2e-08 62.0 200 30.0
Dinv28182 Davidia involucrata HOM05D008015 ORTHO05D009180 1.1e-07 61.2 180 30.6
arahy.Tifrunner.gnm1.ann1.NRE7W4 Arachis hypogaea HOM05D009275 ORTHO05D009180 6.9e-07 58.5 161 31.1
Dinv38525 Davidia involucrata HOM05D007505 ORTHO05D009476 9.0e-07 58.2 99 36.4
PGR004G2766 Punica granatum HOM05D009275 ORTHO05D009180 7.6e-06 55.1 193 26.4
Lj4g0014699 Lotus japonicus HOM05D007505 ORTHO05D009476 9.9e-06 54.7 104 35.6


User provided reference genes

Program Settings