Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.3443 Avicennia marina HOM05D000958 ORTHO05D000786 6.0e-73 277.3 133 100.0
MSTRG.18040 Avicennia marina HOM05D000958 ORTHO05D011934 1.1e-10 70.5 103 36.9
CANSAT64G0153 Cannabis sativa HOM05D000958 ORTHO05D000786 5.6e-10 68.2 90 41.1
Oeu014958.2 Olea europaea HOM05D000958 ORTHO05D000786 1.2e-09 67.0 94 36.2
Aqoxy5G03049 Aquilegia oxysepala HOM05D000958 ORTHO05D000786 1.6e-09 66.6 103 35.0
Lj3A1010T58 Lonicera japonica HOM05D000958 ORTHO05D000786 2.8e-09 65.9 92 39.1
unitig_749.g14270 Utricularia gibba HOM05D000958 ORTHO05D000786 3.6e-09 65.5 107 34.6
GSVIVG01020801001 Vitis vinifera HOM05D000958 ORTHO05D000786 3.6e-09 65.5 73 43.8
Hund20215 Selenicereus undatus HOM05D000958 ORTHO05D000786 4.7e-09 65.1 83 41.0
EL10Ac7g16539 Beta vulgaris HOM05D000958 ORTHO05D000786 6.1e-09 64.7 101 37.6
Migut.N02836 Erythranthe guttata HOM05D000958 ORTHO05D000786 8.0e-09 64.3 110 33.6
Migut.O00443 Erythranthe guttata HOM05D000958 ORTHO05D000786 8.0e-09 64.3 113 36.3
CANSAT25G1911 Cannabis sativa HOM05D000958 ORTHO05D000786 1.0e-08 63.9 87 40.2
Migut.J00554 Erythranthe guttata HOM05D000958 ORTHO05D000786 1.0e-08 63.9 84 40.5
Oeu035833.1 Olea europaea HOM05D000958 ORTHO05D000786 1.4e-08 63.5 87 40.2
SalBow3G2824 Salvia bowleyana HOM05D000958 ORTHO05D000786 2.3e-08 62.8 80 40.0
DCAR_009829 Daucus carota HOM05D000958 ORTHO05D000786 3.1e-08 62.4 81 40.7
Oeu038158.1 Olea europaea HOM05D000958 ORTHO05D000786 3.1e-08 62.4 72 43.1
TWI74G1408 Tripterygium wilfordii HOM05D000958 ORTHO05D000786 3.1e-08 62.4 103 36.9
Dinv09490 Davidia involucrata HOM05D000958 ORTHO05D000786 5.2e-08 61.6 90 37.8
Eucgr.K01329 Eucalyptus grandis HOM05D000958 ORTHO05D000786 5.2e-08 61.6 73 42.5
Atru.chr8.938_Atru.chr8.939 Acer truncatum HOM05D000958 ORTHO05D000786 6.8e-08 61.2 117 32.5
Ah.15g092260 Amaranthus hybridus HOM05D000958 ORTHO05D000786 6.8e-08 61.2 90 35.6
Ciclev10011411m.g Citrus clementina HOM05D000958 ORTHO05D000786 6.8e-08 61.2 73 41.1
arahy.Tifrunner.gnm1.ann1.NLJ7EF Arachis hypogaea HOM05D000958 ORTHO05D000786 8.9e-08 60.8 79 39.2
arahy.Tifrunner.gnm1.ann1.SN11VZ Arachis hypogaea HOM05D000958 ORTHO05D000786 8.9e-08 60.8 80 38.8
Cpa.g.sc226.3 Carica papaya HOM05D000958 ORTHO05D000786 8.9e-08 60.8 100 37.0
Ciclev10011512m.g Citrus clementina HOM05D000958 ORTHO05D000786 8.9e-08 60.8 106 34.9
Eucgr.K03240 Eucalyptus grandis HOM05D000958 ORTHO05D000786 1.2e-07 60.5 79 40.5
Lalb_Chr20g0112751 Lupinus albus HOM05D000958 ORTHO05D000786 1.2e-07 60.5 84 41.7
PGR004G1512 Punica granatum HOM05D000958 ORTHO05D000786 1.2e-07 60.5 73 42.5
Duzib093G1740 Durio zibethinus HOM05D000958 ORTHO05D000786 1.5e-07 60.1 106 34.9
Lj2A111T61 Lonicera japonica HOM05D000958 ORTHO05D000786 1.5e-07 60.1 79 41.8
Actinidia40031 Actinidia chinensis HOM05D000958 ORTHO05D000786 2.0e-07 59.7 88 37.5
arahy.Tifrunner.gnm1.ann1.418F0V Arachis hypogaea HOM05D000958 ORTHO05D000786 2.0e-07 59.7 87 37.9
AUR62043145 Chenopodium quinoa HOM05D000958 ORTHO05D000786 2.0e-07 59.7 104 34.6
Dinv27209 Davidia involucrata HOM05D000958 ORTHO05D011934 2.0e-07 59.7 87 35.6
CDE08G0303 Ceratophyllum demersum HOM05D000958 ORTHO05D000786 2.6e-07 59.3 98 37.8
AUR62040361 Chenopodium quinoa HOM05D000958 ORTHO05D000786 2.6e-07 59.3 88 36.4
Lj6g0021547 Lotus japonicus HOM05D000958 ORTHO05D000786 2.6e-07 59.3 72 40.3
Sabra06G0017500 Salix brachista HOM05D000958 ORTHO05D000786 3.4e-07 58.9 79 38.0
Gohir.D09G007000 Gossypium hirsutum HOM05D000958 ORTHO05D000786 4.4e-07 58.5 83 37.3
Lalb_Chr04g0246991 Lupinus albus HOM05D000958 ORTHO05D000786 4.4e-07 58.5 80 37.5
MD17G1124100 Malus domestica HOM05D000958 ORTHO05D000786 4.4e-07 58.5 81 39.5
Gohir.A09G007600 Gossypium hirsutum HOM05D000958 ORTHO05D000786 5.8e-07 58.2 73 39.7
Gorai.006G008500 Gossypium raimondii HOM05D000958 ORTHO05D000786 5.8e-07 58.2 73 39.7
Potri.006G024000 Populus trichocarpa HOM05D000958 ORTHO05D000786 7.5e-07 57.8 79 38.0
Rhsim04G0147800 Rhododendron simsii HOM05D000958 ORTHO05D000786 7.5e-07 57.8 86 38.4
SGA_v2.0_scaffold75G24868 Striga asiatica HOM05D000958 ORTHO05D000786 7.5e-07 57.8 84 35.7
unitig_8.g4104 Utricularia gibba HOM05D000958 ORTHO05D000786 7.5e-07 57.8 94 34.0
MSTRG.9807 Avicennia marina HOM05D000958 ORTHO05D000786 9.8e-07 57.4 107 32.7
Cc05_g00590 Coffea canephora HOM05D000958 ORTHO05D000786 9.8e-07 57.4 72 40.3
Potri.016G022900 Populus trichocarpa HOM05D000958 ORTHO05D000786 1.3e-06 57.0 79 36.7
Sabra16G0023100 Salix brachista HOM05D000958 ORTHO05D000786 1.3e-06 57.0 79 36.7
Sabra16G0029100 Salix brachista HOM05D000958 ORTHO05D000786 1.3e-06 57.0 79 36.7
BcaC06g32039 Brassica carinata HOM05D000958 ORTHO05D000786 1.7e-06 56.6 83 36.1
BolC9t60092H Brassica oleracea HOM05D000958 ORTHO05D000786 1.7e-06 56.6 83 36.1
LjContig00081g0005402 Lotus japonicus HOM05D000958 ORTHO05D000786 1.7e-06 56.6 80 38.8
SGA_v2.0_scaffold126G33923 Striga asiatica HOM05D000958 ORTHO05D000786 1.7e-06 56.6 80 36.2
EL10Ac9g22889 Beta vulgaris HOM05D000958 ORTHO05D000786 2.2e-06 56.2 106 32.1
MD09G1135100 Malus domestica HOM05D000958 ORTHO05D000786 2.2e-06 56.2 81 39.5
Nitab4.5_0001843g0160 Nicotiana tabacum HOM05D000958 ORTHO05D000786 2.2e-06 56.2 72 36.1
Nitab4.5_0006724g0030 Nicotiana tabacum HOM05D000958 ORTHO05D000786 2.2e-06 56.2 72 36.1
Prupe.3G191600 Prunus persica HOM05D000958 ORTHO05D000786 2.2e-06 56.2 81 39.5
Ca_05254_v3 Cicer arietinum L. HOM05D000958 ORTHO05D000786 2.9e-06 55.8 109 32.1
Glyma.13G139200 Glycine max HOM05D000958 ORTHO05D000786 3.7e-06 55.5 73 39.7
BcaC06g32037 Brassica carinata HOM05D000958 ORTHO05D000786 4.9e-06 55.1 84 38.1
BolC9t60093H Brassica oleracea HOM05D000958 ORTHO05D000786 4.9e-06 55.1 84 38.1
VMungo0540G0404 Vigna mungo HOM05D000958 ORTHO05D000786 4.9e-06 55.1 102 32.4
C09p73630 Brassica napus HOM05D000958 ORTHO05D000786 6.4e-06 54.7 84 38.1
Carub.0003s0576 Capsella rubella HOM05D000958 ORTHO05D000786 6.4e-06 54.7 87 34.5
CiPaw.09G177200 Carya illinoinensis HOM05D000958 ORTHO05D000786 6.4e-06 54.7 81 33.3
Sp3g05240 Schrenkiella parvula HOM05D000958 ORTHO05D000786 6.4e-06 54.7 87 34.5
BraA02t04747Z Brassica rapa HOM05D000958 ORTHO05D000786 8.3e-06 54.3 85 36.5


User provided reference genes

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