Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 1.2e-68 263.1 132 100.0
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 1.5e-39 166.4 114 71.1
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 1.3e-38 163.3 111 73.9
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 1.7e-35 152.9 108 69.4
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 1.9e-34 149.4 114 64.0
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 4.2e-34 148.3 123 59.3
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 5.5e-34 147.9 113 62.8
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 5.5e-34 147.9 113 62.8
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 2.1e-33 146.0 114 66.7
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 2.7e-33 145.6 114 66.7
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 7.9e-33 144.1 114 66.7
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 1.3e-32 143.3 112 63.4
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 2.3e-32 142.5 107 61.7
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 3.9e-32 141.7 120 57.5
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 1.5e-31 139.8 111 61.3
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 1.5e-31 139.8 114 64.9
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 3.3e-31 138.7 108 68.5
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 5.7e-31 137.9 110 62.7
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 9.7e-31 137.1 108 63.0
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 2.8e-30 135.6 118 56.8
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 2.8e-30 135.6 108 65.7
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 3.7e-30 135.2 110 60.0
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 8.2e-30 134.0 113 60.2
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 1.1e-29 133.7 116 57.8
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 1.4e-29 133.3 105 63.8
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 5.3e-29 131.3 108 59.3
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 5.3e-29 131.3 108 59.3
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 5.3e-29 131.3 121 54.5
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 9.1e-29 130.6 107 57.9
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 1.2e-28 130.2 114 57.0
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 1.5e-28 129.8 108 61.1
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 2.6e-28 129.0 108 58.3
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 4.5e-28 128.3 105 59.0
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 4.5e-28 128.3 107 58.9
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 7.7e-28 127.5 110 59.1
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 1.0e-27 127.1 108 57.4
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 1.0e-27 127.1 107 57.9
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 1.3e-27 126.7 106 59.4
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 1.3e-27 126.7 107 59.8
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 1.3e-27 126.7 115 55.7
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 1.7e-27 126.3 105 61.0
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 2.2e-27 125.9 109 55.0
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 2.2e-27 125.9 113 55.8
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 2.9e-27 125.6 110 59.1
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 3.8e-27 125.2 105 59.0
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 6.5e-27 124.4 106 58.5
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 1.1e-26 123.6 108 57.4
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.1e-26 123.6 110 57.3
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 1.1e-26 123.6 110 54.5
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 1.9e-26 122.9 107 56.1
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 1.9e-26 122.9 106 58.5
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 2.5e-26 122.5 108 56.5
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.5e-26 122.5 110 56.4
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 2.5e-26 122.5 107 57.9
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 2.5e-26 122.5 107 57.0
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 2.5e-26 122.5 110 57.3
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 3.2e-26 122.1 107 57.0
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 3.2e-26 122.1 108 55.6
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 4.2e-26 121.7 105 59.0
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 9.4e-26 120.6 107 57.9
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.2e-25 120.2 110 55.5
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 1.2e-25 120.2 107 56.1
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 1.2e-25 120.2 107 55.1
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 2.1e-25 119.4 112 53.6
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 3.6e-25 118.6 107 58.9
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 7.9e-25 117.5 79 70.9
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 1.0e-24 117.1 108 50.9
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 1.0e-24 117.1 108 50.9
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 1.0e-24 117.1 107 53.3
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 1.4e-24 116.7 108 50.9
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 1.4e-24 116.7 108 50.9
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 1.4e-24 116.7 109 55.0
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 1.4e-24 116.7 108 51.9
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 1.8e-24 116.3 108 50.9
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 1.8e-24 116.3 108 50.9
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.8e-24 116.3 73 76.7
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 1.8e-24 116.3 107 50.5
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 3.0e-24 115.5 108 50.9
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 3.0e-24 115.5 108 50.9
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 3.9e-24 115.2 107 56.1
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 5.1e-24 114.8 109 51.4
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 5.1e-24 114.8 107 51.4
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 6.7e-24 114.4 107 52.3
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 8.8e-24 114.0 107 55.1
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 1.5e-23 113.2 108 50.9
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 3.3e-23 112.1 106 55.7
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 3.3e-23 112.1 110 52.7
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 2.8e-22 109.0 81 61.7
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 3.7e-22 108.6 108 49.1
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 6.3e-22 107.8 99 56.6
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 8.2e-22 107.5 99 52.5
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 1.4e-21 106.7 108 47.2
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.8e-21 106.3 109 52.3
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 4.1e-21 105.1 123 44.7
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 9.1e-21 104.0 65 75.4
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 5.0e-19 98.2 66 72.7
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 9.4e-18 94.0 110 43.6
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.8e-16 89.7 99 51.5
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 2.3e-16 89.4 110 41.8
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 5.2e-16 88.2 57 70.2
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 6.3e-14 81.3 104 41.3
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 8.2e-14 80.9 112 39.3
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 7.0e-13 77.8 110 42.7
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 4.2e-10 68.6 69 43.5
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 4.4e-07 58.5 37 75.7


User provided reference genes

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