Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 2.7e-155 552.0 286 100.0
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 4.4e-129 464.9 287 82.2
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 2.0e-126 456.1 289 82.4
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 1.4e-122 443.4 289 79.9
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 2.9e-120 435.6 289 78.5
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 3.5e-118 428.7 290 75.5
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 4.6e-118 428.3 297 75.1
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 7.8e-118 427.6 293 77.1
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 1.7e-117 426.4 294 77.6
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 3.0e-117 425.6 294 77.2
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 1.1e-116 423.7 291 77.3
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 2.5e-116 422.5 298 74.8
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 3.6e-115 418.7 297 74.4
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 8.0e-115 417.5 295 76.3
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 8.0e-115 417.5 292 76.4
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 6.8e-114 414.5 298 75.2
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 1.3e-112 410.2 296 74.3
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 2.2e-112 409.5 295 73.9
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 4.9e-112 408.3 298 74.5
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 8.3e-112 407.5 296 72.6
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 1.4e-111 406.8 298 73.8
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 1.9e-111 406.4 259 81.9
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 2.4e-111 406.0 297 72.7
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 2.4e-111 406.0 296 71.6
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 5.4e-111 404.8 294 73.8
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 1.2e-110 403.7 297 74.1
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 1.6e-110 403.3 297 72.4
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 2.0e-110 402.9 290 73.4
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 3.5e-110 402.1 299 72.2
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 3.5e-110 402.1 296 71.6
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 4.6e-110 401.7 287 73.5
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 1.3e-109 400.2 297 72.1
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 2.3e-109 399.4 299 73.6
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 3.0e-109 399.1 294 71.4
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 3.0e-109 399.1 296 72.6
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 5.0e-109 398.3 296 72.6
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 6.6e-109 397.9 298 72.8
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 8.6e-109 397.5 297 72.1
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 1.1e-108 397.1 297 72.4
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 1.5e-108 396.7 298 71.1
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 1.9e-108 396.4 297 71.7
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 1.9e-108 396.4 297 72.4
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 2.5e-108 396.0 304 71.7
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 4.3e-108 395.2 297 71.0
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 5.6e-108 394.8 294 70.1
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 5.6e-108 394.8 297 72.4
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 1.6e-107 393.3 297 69.7
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 1.6e-107 393.3 297 71.0
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 2.1e-107 392.9 296 71.6
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 2.3e-106 389.4 291 72.2
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 4.0e-106 388.7 290 70.7
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 4.0e-106 388.7 297 70.4
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 5.2e-106 388.3 295 70.8
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 8.9e-106 387.5 296 68.6
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 1.5e-105 386.7 297 71.0
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 1.5e-105 386.7 300 69.0
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 1.5e-105 386.7 297 69.7
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 2.0e-105 386.3 297 70.0
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 3.4e-105 385.6 293 71.3
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 3.4e-105 385.6 290 69.3
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 3.4e-105 385.6 290 70.3
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 5.8e-105 384.8 295 71.5
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 5.8e-105 384.8 290 70.7
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 5.8e-105 384.8 290 70.7
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 5.8e-105 384.8 290 70.3
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 5.8e-105 384.8 290 69.7
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 7.5e-105 384.4 295 71.2
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 9.8e-105 384.0 290 70.0
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 9.8e-105 384.0 292 70.2
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.3e-104 383.6 291 70.8
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 6.4e-104 381.3 312 67.0
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 6.4e-104 381.3 291 70.4
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 8.3e-104 380.9 290 68.6
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 1.1e-103 380.6 304 68.1
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 1.4e-103 380.2 296 73.0
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 1.4e-103 380.2 271 73.8
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 1.9e-103 379.8 297 69.0
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 4.1e-103 378.6 287 71.4
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 7.1e-103 377.9 293 68.9
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 7.1e-103 377.9 297 69.0
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 1.6e-102 376.7 294 68.0
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 2.1e-102 376.3 291 67.7
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 2.7e-102 375.9 286 67.5
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 7.8e-102 374.4 252 77.0
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 7.8e-102 374.4 286 71.3
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 1.0e-101 374.0 289 68.5
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 1.7e-101 373.2 287 68.3
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 1.7e-101 373.2 287 68.3
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 3.0e-101 372.5 287 68.3
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 3.0e-101 372.5 287 68.3
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 3.0e-101 372.5 287 68.3
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 3.9e-101 372.1 226 83.2
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 5.1e-101 371.7 287 67.6
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 1.5e-100 370.2 293 65.5
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 1.5e-100 370.2 301 69.4
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 1.5e-100 370.2 287 68.3
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 4.3e-100 368.6 239 78.7
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 1.2e-99 367.1 288 67.0
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 4.7e-99 365.2 288 67.4
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 1.1e-98 364.0 290 66.6
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 1.4e-98 363.6 291 66.3
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 2.3e-98 362.8 288 66.7
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 9.2e-95 350.9 295 67.1
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 3.9e-93 345.5 205 86.8
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 1.2e-91 340.5 233 75.1
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.1e-90 335.9 229 74.2
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 4.4e-89 332.0 273 65.2
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 2.9e-88 329.3 273 64.5
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 2.1e-86 323.2 233 71.7
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 3.3e-84 315.8 226 73.0
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 3.6e-83 312.4 224 70.1
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 8.4e-80 301.2 224 68.3
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 1.5e-73 280.4 225 63.1
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 9.9e-73 277.7 203 68.0
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 1.3e-64 250.8 212 64.2
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 3.4e-57 226.1 137 78.1
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 5.0e-56 222.2 145 75.9
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 1.5e-49 200.7 228 46.5
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 3.4e-49 199.5 205 48.3
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 3.8e-40 169.5 226 40.3
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 2.0e-33 147.1 86 81.4
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 4.5e-33 146.0 89 85.4
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 1.2e-30 137.9 83 84.3
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 1.0e-24 118.2 64 84.4
AUR62000865 Chenopodium quinoa HOM05D006416 ORTHO05D008054 9.5e-07 58.5 78 46.2


User provided reference genes

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