Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 1.2e-121 439.9 231 100.0
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 5.2e-96 354.8 231 80.5
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 2.4e-93 345.9 231 80.1
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 1.8e-85 319.7 229 73.4
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 4.1e-85 318.5 227 74.4
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 5.9e-84 314.7 229 72.9
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 1.3e-83 313.5 216 78.2
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 2.3e-83 312.8 218 68.8
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 3.8e-83 312.0 223 72.6
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 6.5e-83 311.2 219 76.7
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 1.1e-82 310.5 228 71.9
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 4.2e-82 308.5 227 69.6
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 1.2e-81 307.0 226 67.7
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 1.6e-81 306.6 217 68.7
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 2.8e-81 305.8 216 75.9
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 3.6e-81 305.4 221 66.5
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 3.6e-81 305.4 224 69.2
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 1.4e-80 303.5 217 67.7
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 1.8e-80 303.1 224 65.2
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 2.3e-80 302.8 216 75.0
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 4.0e-80 302.0 216 74.1
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 4.0e-80 302.0 228 63.6
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 5.2e-80 301.6 226 63.7
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 6.8e-80 301.2 216 75.0
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 6.8e-80 301.2 214 74.8
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 6.8e-80 301.2 216 73.6
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 6.8e-80 301.2 216 73.6
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 1.2e-79 300.4 224 70.5
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 1.5e-79 300.1 231 61.9
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 2.0e-79 299.7 224 69.6
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 2.6e-79 299.3 217 72.4
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 3.4e-79 298.9 216 70.8
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 3.4e-79 298.9 216 70.8
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 3.4e-79 298.9 216 74.5
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 5.7e-79 298.1 216 66.2
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 5.7e-79 298.1 214 72.9
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.7e-78 296.6 216 72.7
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 4.9e-78 295.0 223 69.1
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 1.1e-77 293.9 212 71.2
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 1.1e-77 293.9 214 72.0
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 1.8e-77 293.1 214 72.4
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.8e-77 293.1 216 71.8
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.8e-77 293.1 216 71.8
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 2.4e-77 292.7 215 71.2
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 4.1e-77 292.0 214 71.5
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 4.1e-77 292.0 214 71.5
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 4.1e-77 292.0 229 62.0
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 4.1e-77 292.0 214 71.0
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 7.0e-77 291.2 215 70.7
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 9.2e-77 290.8 216 70.4
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.2e-76 290.4 214 71.0
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.6e-76 290.0 216 71.3
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 2.0e-76 289.7 232 66.8
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 2.7e-76 289.3 209 76.1
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 4.5e-76 288.5 226 69.9
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 7.8e-76 287.7 225 66.7
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 7.8e-76 287.7 225 65.8
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 7.8e-76 287.7 216 70.8
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 7.8e-76 287.7 230 61.7
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 1.0e-75 287.3 219 70.8
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 1.7e-75 286.6 225 69.8
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 2.3e-75 286.2 214 69.2
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 3.8e-75 285.4 174 74.7
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 3.8e-75 285.4 216 69.4
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 6.6e-75 284.6 269 52.8
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 1.1e-74 283.9 206 71.8
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 1.5e-74 283.5 216 63.9
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 1.9e-74 283.1 220 68.2
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 1.9e-74 283.1 220 67.7
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 1.9e-74 283.1 209 63.6
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 1.9e-74 283.1 209 72.2
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 2.5e-74 282.7 220 66.8
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 2.5e-74 282.7 215 62.3
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 5.6e-74 281.6 220 68.6
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 5.6e-74 281.6 220 67.7
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 1.2e-73 280.4 220 66.4
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 1.2e-73 280.4 231 66.7
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 1.6e-73 280.0 225 64.9
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 2.8e-73 279.3 220 67.7
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 3.6e-73 278.9 231 69.7
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 4.7e-73 278.5 220 65.9
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 6.1e-73 278.1 219 66.2
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 6.1e-73 278.1 219 66.2
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 5.2e-72 275.0 207 66.2
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 6.8e-72 274.6 207 66.7
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 1.2e-71 273.9 218 65.6
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 4.4e-71 271.9 220 65.5
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 4.4e-71 271.9 220 58.2
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 9.8e-71 270.8 214 66.4
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 2.2e-70 269.6 214 65.0
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 4.9e-70 268.5 171 73.7
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 4.9e-70 268.5 207 69.6
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 1.1e-69 267.3 207 68.6
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 1.6e-68 263.5 218 64.2
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 3.5e-68 262.3 224 63.4
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 3.5e-68 262.3 205 68.8
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 1.0e-67 260.8 209 67.5
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 6.6e-67 258.1 207 66.7
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 1.5e-66 256.9 213 66.2
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 2.5e-66 256.1 209 56.9
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 2.5e-66 256.1 199 69.8
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 1.2e-65 253.8 213 65.7
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 1.1e-64 250.8 191 68.6
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 1.4e-64 250.4 207 66.7
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 4.0e-64 248.8 207 59.4
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 2.2e-62 243.0 209 61.7
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 1.3e-59 233.8 217 53.0
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 3.9e-59 232.3 216 60.2
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 2.5e-58 229.6 218 51.4
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 4.7e-57 225.3 218 55.0
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 7.1e-53 211.5 178 58.4
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 8.9e-48 194.5 203 54.2
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 1.1e-45 187.6 229 49.8
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 1.9e-45 186.8 178 52.2
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 3.9e-43 179.1 166 51.8
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 6.9e-40 168.3 146 52.7
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 2.8e-33 146.4 165 44.2
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 8.1e-33 144.8 97 72.2
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 5.4e-29 132.1 104 74.0
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 8.4e-14 81.6 78 50.0
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 4.2e-13 79.3 53 69.8
EL10Ac6g15726 Beta vulgaris HOM05D006615 ORTHO05D007999 2.2e-09 67.0 63 54.0
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.8e-08 63.9 146 35.6
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.1e-08 63.2 148 34.5
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 9.0e-08 61.6 113 38.9
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.0e-08 61.6 113 38.9
EL10Ac1g00777 Beta vulgaris HOM05D002629 ORTHO05D003221 7.7e-07 58.5 174 29.3
RcHm_v2.0_Chr3g0487451 Rosa chinensis HOM05D032618 ORTHO05D007999 1.3e-06 57.8 52 50.0
Aqoxy4G02446 Aquilegia oxysepala HOM05D001818 ORTHO05D001780 1.7e-06 57.4 85 30.6
Rhsim07G0034900 Rhododendron simsii HOM05D002629 ORTHO05D003221 5.0e-06 55.8 174 28.2
FAN23G0561 Fragaria x ananassa HOM05D000710 ORTHO05D000336 6.5e-06 55.5 175 27.4


User provided reference genes

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