Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.27972 Avicennia marina HOM05D007682 ORTHO05D009690 2.7e-36 156.0 179 100.0
Cc02_g34370 Coffea canephora HOM05D007682 ORTHO05D009690 8.5e-22 107.8 110 76.4
Hma1.2p1_0472F.1_g159680 Hydrangea macrophylla HOM05D007682 ORTHO05D009690 8.5e-22 107.8 110 77.3
SGA_v2.0_scaffold81G26104 Striga asiatica HOM05D007682 ORTHO05D009690 2.5e-21 106.3 60 90.0
Haze_04118 Corylus avellana HOM05D007682 ORTHO05D009690 9.4e-21 104.4 111 55.9
Oeu010924.1 Olea europaea HOM05D007682 ORTHO05D009690 2.7e-20 102.8 99 83.8
CAN.G1273.42 Capsicum annuum HOM05D007682 ORTHO05D009690 3.6e-20 102.4 105 75.2
Migut.N02098 Erythranthe guttata HOM05D007682 ORTHO05D009690 3.6e-20 102.4 60 86.7
Peaxi162Scf00037g01515 Petunia axillaris HOM05D007682 ORTHO05D009690 6.1e-20 101.7 60 86.7
PSO407G0292 Papaver somniferum HOM05D007682 ORTHO05D009690 8.0e-20 101.3 101 79.2
ECA236G4368 Erigeron canadensis HOM05D000036 ORTHO05D000441 1.4e-19 100.5 58 87.9
Nn4g25761 Nelumbo nucifera HOM05D007682 ORTHO05D009690 1.8e-19 100.1 58 86.2
Manes.08G115600 Manihot esculenta HOM05D007682 ORTHO05D009690 2.3e-19 99.8 107 73.8
Nitab4.5_0003113g0070 Nicotiana tabacum HOM05D007682 ORTHO05D009690 2.3e-19 99.8 60 85.0
SEGI_39810 Sequoiadendron giganteum HOM05D007682 ORTHO05D009690 2.3e-19 99.8 60 81.7
Lsat_1_v5_gn_7_72960 Lactuca sativa HOM05D007682 ORTHO05D009690 4.0e-19 99.0 58 86.2
RcHm_v2.0_Chr6g0276771 Rosa chinensis HOM05D007682 ORTHO05D009690 5.2e-19 98.6 59 84.7
Solyc01g099930.3 Solanum lycopersicum HOM05D007682 ORTHO05D009690 5.2e-19 98.6 60 83.3
PSO170G1207 Papaver somniferum HOM05D007682 ORTHO05D009690 6.8e-19 98.2 58 84.5
Prupe.8G021600 Prunus persica HOM05D007682 ORTHO05D009690 6.8e-19 98.2 59 84.7
CSS0049840 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 8.8e-19 97.8 58 84.5
THA.LOC104821730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 8.8e-19 97.8 58 84.5
DCAR_022138 Daucus carota HOM05D007682 ORTHO05D009690 1.2e-18 97.4 58 82.8
TAR633G0769 Trochodendron aralioides HOM05D007682 ORTHO05D009690 1.2e-18 97.4 59 83.1
FAN20G0672 Fragaria x ananassa HOM05D007682 ORTHO05D009690 1.5e-18 97.1 59 83.1
FAN24G1339 Fragaria x ananassa HOM05D007682 ORTHO05D009690 1.5e-18 97.1 59 83.1
PGR031G1366 Punica granatum HOM05D007682 ORTHO05D009690 2.0e-18 96.7 58 84.5
Actinidia21502 Actinidia chinensis HOM05D007682 ORTHO05D009690 2.6e-18 96.3 60 81.7
CDE05G1347 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 3.4e-18 95.9 58 82.8
CDE11G0615 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 3.4e-18 95.9 58 82.8
MD10G1017700 Malus domestica HOM05D007682 ORTHO05D009690 3.4e-18 95.9 58 84.5
THA.LOC104818730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 3.4e-18 95.9 58 82.8
HPP92_010663 Vanilla planifolia HOM05D007682 ORTHO05D009690 3.4e-18 95.9 112 62.5
BcaNung04745 Brassica carinata HOM05D007682 ORTHO05D009690 4.4e-18 95.5 58 81.0
QL03p019528 Quercus lobata HOM05D007682 ORTHO05D009690 5.7e-18 95.1 57 82.5
AUR62000737 Chenopodium quinoa HOM05D007682 ORTHO05D009690 7.5e-18 94.7 58 81.0
Glyma.19G231600 Glycine max HOM05D007682 ORTHO05D009690 7.5e-18 94.7 58 82.8
HanXRQChr11g0340111 Helianthus annuus HOM05D007682 ORTHO05D009690 7.5e-18 94.7 58 81.0
Eucgr.H03256 Eucalyptus grandis HOM05D007682 ORTHO05D009690 9.8e-18 94.4 58 81.0
Sp2g20980 Schrenkiella parvula HOM05D007682 ORTHO05D009690 9.8e-18 94.4 58 81.0
Dinv30837 Davidia involucrata HOM05D007682 ORTHO05D009690 1.3e-17 94.0 61 82.0
Gorai.007G301900 Gossypium raimondii HOM05D007682 ORTHO05D009690 1.3e-17 94.0 58 82.8
A06p37270 Brassica napus HOM05D007682 ORTHO05D009690 1.7e-17 93.6 58 79.3
C07p41180 Brassica napus HOM05D007682 ORTHO05D009690 1.7e-17 93.6 58 79.3
BolC7t44646H Brassica oleracea HOM05D007682 ORTHO05D009690 1.7e-17 93.6 58 79.3
BraA06t26650Z Brassica rapa HOM05D007682 ORTHO05D009690 1.7e-17 93.6 58 79.3
Gohir.A08G208100 Gossypium hirsutum HOM05D007682 ORTHO05D009690 2.2e-17 93.2 58 81.0
Phvul.006G088300 Phaseolus vulgaris HOM05D007682 ORTHO05D009690 2.2e-17 93.2 59 79.7
Potri.005G023000 Populus trichocarpa HOM05D007682 ORTHO05D009690 2.2e-17 93.2 59 81.4
CiPaw.08G159600 Carya illinoinensis HOM05D007682 ORTHO05D009690 2.8e-17 92.8 105 74.3
Glyma.03G234200 Glycine max HOM05D007682 ORTHO05D009690 2.8e-17 92.8 58 81.0
Os12g0516700 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 2.8e-17 92.8 58 77.6
Os12g0554000 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 2.8e-17 92.8 58 77.6
AUR62005227 Chenopodium quinoa HOM05D007682 ORTHO05D009690 3.7e-17 92.4 58 77.6
FAN15G0817 Fragaria x ananassa HOM05D007682 ORTHO05D009690 3.7e-17 92.4 59 79.7
Gohir.D08G224900 Gossypium hirsutum HOM05D007682 ORTHO05D009690 3.7e-17 92.4 60 76.7
Gohir.D11G279700 Gossypium hirsutum HOM05D007682 ORTHO05D009690 3.7e-17 92.4 58 81.0
AT5G27860 Arabidopsis thaliana HOM05D007682 ORTHO05D009690 4.8e-17 92.0 58 79.3
Gohir.A11G269500 Gossypium hirsutum HOM05D007682 ORTHO05D009690 4.8e-17 92.0 58 81.0
CARHR186340 Cardamine hirsuta HOM05D007682 ORTHO05D009690 6.3e-17 91.7 58 79.3
Gorai.004G238900 Gossypium raimondii HOM05D007682 ORTHO05D009690 6.3e-17 91.7 60 76.7
Aa31LG11G9610 Aethionema arabicum HOM05D007682 ORTHO05D009690 8.3e-17 91.3 58 77.6
arahy.Tifrunner.gnm1.ann1.P6132C Arachis hypogaea HOM05D007682 ORTHO05D009690 8.3e-17 91.3 58 79.3
arahy.Tifrunner.gnm1.ann1.S47DRU Arachis hypogaea HOM05D007682 ORTHO05D009690 8.3e-17 91.3 58 79.3
Atru.chr2.100 Acer truncatum HOM05D007682 ORTHO05D009690 1.1e-16 90.9 59 78.0
Thecc.05G315600 Theobroma cacao HOM05D007682 ORTHO05D009690 1.1e-16 90.9 58 79.3
Lalb_Chr15g0077471 Lupinus albus HOM05D007682 ORTHO05D009690 1.4e-16 90.5 58 79.3
TPR.G1619 Trifolium pratense HOM05D007682 ORTHO05D009690 1.4e-16 90.5 60 76.7
GSVIVG01031165001 Vitis vinifera HOM05D000036 ORTHO05D000441 1.4e-16 90.5 101 81.2
Duzib177G0692 Durio zibethinus HOM05D007682 ORTHO05D009690 1.8e-16 90.1 58 79.3
Medtr7g112600 Medicago truncatula HOM05D007682 ORTHO05D009690 1.8e-16 90.1 58 79.3
Psat3g011680 Pisum sativum HOM05D007682 ORTHO05D009690 1.8e-16 90.1 58 79.3
Sabra05G0029000 Salix brachista HOM05D007682 ORTHO05D009690 1.8e-16 90.1 59 79.7
MBI19_g44105_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 2.4e-16 89.7 54 83.3
Sed0011876 Sechium edule HOM05D007682 ORTHO05D009690 2.4e-16 89.7 58 77.6
SMO367G0406 Selaginella moellendorffii HOM05D007682 ORTHO05D009690 2.4e-16 89.7 60 75.0
TWI56G1223 Tripterygium wilfordii HOM05D007682 ORTHO05D009690 4.1e-16 89.0 57 77.2
Nitab4.5_0003497g0050 Nicotiana tabacum HOM05D007682 ORTHO05D009690 7.0e-16 88.2 54 83.3
Sc16g0008750 Simmondsia chinensis HOM05D000036 ORTHO05D001038 7.0e-16 88.2 58 77.6
CsaV3_1G038640 Cucumis sativus L. HOM05D007682 ORTHO05D009690 9.1e-16 87.8 60 73.3
unitig_699.g19250 Utricularia gibba HOM05D007682 ORTHO05D009690 9.1e-16 87.8 104 67.3
Cfa006654 Carpinus fangiana HOM05D007682 ORTHO05D009690 2.0e-15 86.7 58 75.9
Zm00001eb410110 Zea mays HOM05D007682 ORTHO05D009690 2.0e-15 86.7 59 74.6
ATR0693G225 Amborella trichopoda HOM05D007682 ORTHO05D009690 1.0e-14 84.3 52 80.8
HPP92_010684 Vanilla planifolia HOM05D007682 ORTHO05D009690 2.9e-14 82.8 61 75.4
Ah.06g189950 Amaranthus hybridus HOM05D007682 ORTHO05D009690 3.8e-14 82.4 51 80.4
AL6G39080 Arabidopsis lyrata HOM05D007682 ORTHO05D009690 6.5e-14 81.6 58 72.4
EL10Ac4g09894 Beta vulgaris HOM05D007682 ORTHO05D009690 1.1e-13 80.9 51 78.4
CSS0031357 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 1.1e-13 80.9 58 70.7
Lj1g0016295 Lotus japonicus HOM05D007682 ORTHO05D009690 3.2e-13 79.3 63 69.8
Hund07111 Selenicereus undatus HOM05D007682 ORTHO05D009690 1.2e-12 77.4 51 74.5
DCAR_022140 Daucus carota HOM05D007682 ORTHO05D009690 8.0e-12 74.7 52 71.2
MBI19_g47767_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 3.0e-11 72.8 54 72.2
FvH4_2g14440 Fragaria vesca HOM05D007682 ORTHO05D009690 5.0e-06 55.5 32 81.2


User provided reference genes

Program Settings