Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.27929 Avicennia marina HOM05D008359 ORTHO05D010300 1.4e-48 197.2 241 100.0
Migut.N00946 Erythranthe guttata HOM05D002683 ORTHO05D007541 4.5e-10 69.3 61 57.4
SGA_v2.0_scaffold37G14589 Striga asiatica HOM05D002683 ORTHO05D007541 8.5e-09 65.1 61 50.8
CARHR037590 Cardamine hirsuta HOM05D008359 ORTHO05D010300 1.2e-07 61.2 41 78.0
Carub.0001s3705 Capsella rubella HOM05D008359 ORTHO05D010300 2.1e-07 60.5 38 84.2
AT1G47970 Arabidopsis thaliana HOM05D008359 ORTHO05D010300 3.6e-07 59.7 40 77.5
Sp1g34910 Schrenkiella parvula HOM05D008359 ORTHO05D010300 3.6e-07 59.7 40 77.5
SGA_v2.0_scaffold227G43229 Striga asiatica HOM05D008359 ORTHO05D010300 4.7e-07 59.3 37 75.7
AL1G54480 Arabidopsis lyrata HOM05D008359 ORTHO05D010300 6.1e-07 58.9 38 81.6
BcaC08g42993 Brassica carinata HOM05D008359 ORTHO05D010300 8.0e-07 58.5 41 70.7
SalBow3G0235 Salvia bowleyana HOM05D002683 ORTHO05D007541 1.0e-06 58.2 61 47.5
A06p04780 Brassica napus HOM05D008359 ORTHO05D010300 1.4e-06 57.8 39 74.4
BraA06t23682Z Brassica rapa HOM05D008359 ORTHO05D010300 1.4e-06 57.8 39 74.4
SGA_v2.0_scaffold246G44799 Striga asiatica HOM05D008359 ORTHO05D010300 2.3e-06 57.0 37 81.1
Aa31LG10G5820 Aethionema arabicum HOM05D000167 ORTHO05D000465 5.2e-06 55.8 41 73.2
BolC6t35360H Brassica oleracea HOM05D008359 ORTHO05D010300 5.2e-06 55.8 41 68.3


User provided reference genes

Program Settings