Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.27896 Avicennia marina HOM05D003886 ORTHO05D004587 6.0e-258 893.6 452 100.0
Migut.N00997 Erythranthe guttata HOM05D003886 ORTHO05D004587 3.1e-214 748.4 453 84.1
MSTRG.5179 Avicennia marina HOM05D003886 ORTHO05D004587 1.8e-201 706.1 427 84.1
Dinv24535 Davidia involucrata HOM05D003886 ORTHO05D004587 2.3e-201 705.7 453 79.2
Oeu000173.4 Olea europaea HOM05D003886 ORTHO05D004587 1.3e-196 689.9 533 68.9
Actinidia17720 Actinidia chinensis HOM05D003886 ORTHO05D004587 5.6e-195 684.5 447 77.0
Thecc.06G049000 Theobroma cacao HOM05D003886 ORTHO05D004587 2.1e-194 682.6 450 77.8
Dinv30973 Davidia involucrata HOM05D003886 ORTHO05D004587 4.4e-192 674.9 435 79.1
Cfa002157 Carpinus fangiana HOM05D003886 ORTHO05D004587 9.8e-192 673.7 450 75.6
QL05p085089 Quercus lobata HOM05D003886 ORTHO05D004587 9.8e-192 673.7 457 75.1
Rhsim11G0111800 Rhododendron simsii HOM05D003886 ORTHO05D004587 2.4e-190 669.1 453 75.5
Cc02_g36820 Coffea canephora HOM05D003886 ORTHO05D004587 5.4e-190 667.9 449 77.1
Prupe.3G028400 Prunus persica HOM05D003886 ORTHO05D004587 5.4e-190 667.9 457 74.8
Duzib235G0758 Durio zibethinus HOM05D003886 ORTHO05D004587 9.2e-190 667.2 449 76.2
CiPaw.01G092000 Carya illinoinensis HOM05D003886 ORTHO05D004587 3.5e-189 665.2 449 75.5
TWI75G0340 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 4.6e-189 664.8 447 75.6
GSVIVG01000280001 Vitis vinifera HOM05D003886 ORTHO05D004587 2.3e-188 662.5 454 74.9
Gohir.D10G001000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 1.1e-187 660.2 449 75.1
Gorai.011G001300 Gossypium raimondii HOM05D003886 ORTHO05D004587 1.1e-187 660.2 449 75.1
Oeu010600.1 Olea europaea HOM05D003886 ORTHO05D004587 1.5e-187 659.8 448 75.9
Gohir.A10G000800 Gossypium hirsutum HOM05D003886 ORTHO05D004587 1.9e-187 659.4 449 74.8
CSS0008969 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 2.5e-187 659.1 447 75.4
MD09G1170200 Malus domestica HOM05D003886 ORTHO05D004587 2.5e-187 659.1 450 74.2
Peaxi162Scf00048g01418 Petunia axillaris HOM05D003886 ORTHO05D004587 6.8e-185 651.0 454 74.9
Lj2g0000910 Lotus japonicus HOM05D003886 ORTHO05D004587 1.2e-184 650.2 448 74.1
vmacro01641 Vaccinium macrocarpon HOM05D003886 ORTHO05D004587 1.2e-184 650.2 489 70.3
MD17G1156900 Malus domestica HOM05D003886 ORTHO05D004587 1.5e-184 649.8 451 72.5
TWI12G0365 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 4.4e-184 648.3 442 73.8
CSS0041623 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 7.5e-184 647.5 444 75.0
Manes.15G112100 Manihot esculenta HOM05D003886 ORTHO05D004587 1.7e-183 646.4 450 73.1
CAN.G809.69 Capsicum annuum HOM05D003886 ORTHO05D004587 6.4e-183 644.4 454 74.4
Actinidia11710 Actinidia chinensis HOM05D003886 ORTHO05D004587 1.1e-182 643.7 425 77.4
PGSC0003DMG400017734 Solanum tuberosum HOM05D003886 ORTHO05D004587 5.4e-182 641.3 454 74.4
Manes.03G095300 Manihot esculenta HOM05D003886 ORTHO05D004587 9.2e-182 640.6 450 73.6
Sopen02g026260 Solanum pennellii HOM05D003886 ORTHO05D004587 1.2e-181 640.2 454 74.2
Ca_17750_v3 Cicer arietinum L. HOM05D003886 ORTHO05D004587 7.8e-181 637.5 450 72.2
Glyma.19G049500 Glycine max HOM05D003886 ORTHO05D004587 1.7e-180 636.3 450 73.1
Solyc02g081650.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 1.7e-180 636.3 454 74.0
Atru.chr3.1841 Acer truncatum HOM05D003886 ORTHO05D004587 2.3e-180 636.0 467 69.8
VMungo0464G1314 Vigna mungo HOM05D003886 ORTHO05D004587 8.6e-180 634.0 449 72.8
Peaxi162Scf00198g01528 Petunia axillaris HOM05D003886 ORTHO05D004587 2.5e-179 632.5 454 72.2
THA.LOC104808112 Tarenaya hassleriana HOM05D003886 ORTHO05D004587 5.6e-179 631.3 449 72.8
Glyma.13G045600 Glycine max HOM05D003886 ORTHO05D004587 7.3e-179 630.9 450 72.0
COL.COLO4_26802 Corchorus olitorius HOM05D003886 ORTHO05D004587 2.4e-177 625.9 449 71.9
CANSAT01G1565 Cannabis sativa HOM05D003886 ORTHO05D004587 4.0e-177 625.2 459 71.2
Nitab4.5_0006794g0050 Nicotiana tabacum HOM05D003886 ORTHO05D004587 4.0e-177 625.2 451 73.8
FAN05G1128 Fragaria x ananassa HOM05D003886 ORTHO05D004587 6.8e-177 624.4 452 70.8
Solyc02g032300.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 1.5e-176 623.2 443 74.0
Nitab4.5_0013482g0010 Nicotiana tabacum HOM05D003886 ORTHO05D004587 2.0e-176 622.9 453 73.5
Phvul.004G065600 Phaseolus vulgaris HOM05D003886 ORTHO05D004587 2.0e-176 622.9 451 72.1
Sopen02g010650 Solanum pennellii HOM05D003886 ORTHO05D004587 2.0e-176 622.9 443 74.0
FAN09G1502 Fragaria x ananassa HOM05D003886 ORTHO05D004587 7.6e-176 620.9 452 70.6
TAR624G0406 Trochodendron aralioides HOM05D003886 ORTHO05D004587 9.9e-176 620.5 433 73.0
FAN14G1097 Fragaria x ananassa HOM05D003886 ORTHO05D004587 2.9e-175 619.0 452 70.8
Nn7g35782 Nelumbo nucifera HOM05D003886 ORTHO05D004587 2.9e-175 619.0 451 69.2
TAR626G1553 Trochodendron aralioides HOM05D003886 ORTHO05D004587 2.9e-175 619.0 449 70.8
FvH4_6g36310 Fragaria vesca HOM05D003886 ORTHO05D004587 4.9e-175 618.2 452 70.6
HanXRQChr17g0570801 Helianthus annuus HOM05D003886 ORTHO05D004587 1.4e-174 616.7 450 72.0
Sp5g34070 Schrenkiella parvula HOM05D003886 ORTHO05D004587 1.4e-174 616.7 448 71.4
FAN14G2559 Fragaria x ananassa HOM05D003886 ORTHO05D004587 2.4e-174 615.9 452 70.4
RcHm_v2.0_Chr2g0148321 Rosa chinensis HOM05D003886 ORTHO05D004587 5.4e-174 614.8 455 70.3
HanXRQChr17g0545561 Helianthus annuus HOM05D003886 ORTHO05D004587 1.2e-173 613.6 448 73.0
Medtr8g090035 Medicago truncatula HOM05D003886 ORTHO05D004587 2.1e-173 612.8 450 71.1
EL10Ac9g21865 Beta vulgaris HOM05D003886 ORTHO05D004587 2.7e-173 612.5 447 70.7
arahy.Tifrunner.gnm1.ann1.Z0Z3SY Arachis hypogaea HOM05D003886 ORTHO05D004587 4.6e-173 611.7 481 66.7
Aa31LG4G1970 Aethionema arabicum HOM05D003886 ORTHO05D004587 7.8e-173 610.9 447 71.4
Oeu061917.1 Olea europaea HOM05D003886 ORTHO05D004587 1.0e-172 610.5 516 64.0
AT1G79020 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 1.3e-172 610.1 448 71.0
CsaV3_1G038140 Cucumis sativus L. HOM05D003886 ORTHO05D004587 2.3e-172 609.4 449 69.7
Lalb_Chr21g0317801 Lupinus albus HOM05D003886 ORTHO05D004587 3.0e-172 609.0 449 70.2
MELO3C015232.2 Cucumis melo HOM05D003886 ORTHO05D004587 6.6e-172 607.8 449 69.7
Sabra14G0003200 Salix brachista HOM05D003886 ORTHO05D004587 6.6e-172 607.8 471 69.2
Ciclev10020009m.g Citrus clementina HOM05D003886 ORTHO05D004587 1.1e-171 607.1 468 68.2
Eucgr.F04066 Eucalyptus grandis HOM05D003886 ORTHO05D004587 1.1e-171 607.1 454 70.3
AUR62011474 Chenopodium quinoa HOM05D003886 ORTHO05D004587 1.5e-171 606.7 454 70.7
AUR62016582 Chenopodium quinoa HOM05D003886 ORTHO05D004587 2.5e-171 605.9 447 71.4
ECA234G0089 Erigeron canadensis HOM05D003886 ORTHO05D004587 3.3e-171 605.5 445 71.9
Carub.0002s2589 Capsella rubella HOM05D003886 ORTHO05D004587 5.6e-171 604.7 449 70.4
Duzib192G0492 Durio zibethinus HOM05D003886 ORTHO05D004587 5.6e-171 604.7 449 70.2
Psat7g057280 Pisum sativum HOM05D003886 ORTHO05D004587 5.6e-171 604.7 451 69.8
Thhalv10018536m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 7.3e-171 604.4 454 71.1
AL2G39480 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 9.6e-171 604.0 450 70.2
DCAR_022329 Daucus carota HOM05D003886 ORTHO05D004587 3.6e-170 602.1 450 70.7
Ah.01g020350 Amaranthus hybridus HOM05D003886 ORTHO05D004587 6.2e-170 601.3 447 69.4
Sed0016198 Sechium edule HOM05D003886 ORTHO05D004587 8.1e-170 600.9 448 69.0
Carub.0001s1642 Capsella rubella HOM05D003886 ORTHO05D004587 1.1e-169 600.5 447 71.1
Thhalv10007658m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 1.1e-169 600.5 448 71.0
BolC6t40307H Brassica oleracea HOM05D003886 ORTHO05D004587 1.8e-169 599.7 449 69.5
BcaC08g47466 Brassica carinata HOM05D003886 ORTHO05D004587 2.4e-169 599.4 449 69.7
BraA07t31924Z Brassica rapa HOM05D003886 ORTHO05D004587 6.9e-169 597.8 449 69.5
C06p52890 Brassica napus HOM05D003886 ORTHO05D004587 1.2e-168 597.0 450 69.3
AT1G16690 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 2.0e-168 596.3 448 70.8
BcaB02g07192 Brassica carinata HOM05D003886 ORTHO05D004587 2.6e-168 595.9 448 69.2
Potri.014G000600 Populus trichocarpa HOM05D003886 ORTHO05D004587 2.6e-168 595.9 472 68.6
A07p44160 Brassica napus HOM05D003886 ORTHO05D004587 3.4e-168 595.5 449 69.0
Lalb_Chr06g0174541 Lupinus albus HOM05D003886 ORTHO05D004587 7.6e-168 594.3 448 69.4
PGR102G2920 Punica granatum HOM05D003886 ORTHO05D004587 7.6e-168 594.3 465 69.2
AL1G28850 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 1.3e-167 593.6 450 70.4
BcaC08g45391 Brassica carinata HOM05D003886 ORTHO05D004587 2.4e-166 589.3 453 69.1
Sc24g0001760 Simmondsia chinensis HOM05D003886 ORTHO05D004587 2.4e-166 589.3 451 68.3
C06p30220 Brassica napus HOM05D003886 ORTHO05D004587 3.2e-166 589.0 453 68.9
BolC6t38185H Brassica oleracea HOM05D003886 ORTHO05D004587 3.2e-166 589.0 453 68.9
Lalb_Chr04g0257491 Lupinus albus HOM05D003886 ORTHO05D004587 5.4e-166 588.2 447 67.1
CARHR017150 Cardamine hirsuta HOM05D003886 ORTHO05D004587 2.1e-165 586.3 450 68.9
C02p36140 Brassica napus HOM05D003886 ORTHO05D004587 3.5e-165 585.5 453 68.9
BcaC03g15859 Brassica carinata HOM05D003886 ORTHO05D004587 4.6e-165 585.1 453 68.9
BraA07t30377Z Brassica rapa HOM05D003886 ORTHO05D004587 3.9e-164 582.0 455 68.4
A02p22460 Brassica napus HOM05D003886 ORTHO05D004587 6.6e-164 581.3 451 68.3
unitig_699.g19834 Utricularia gibba HOM05D003886 ORTHO05D004587 1.5e-163 580.1 437 71.2
MBI14_g11787_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 2.5e-163 579.3 424 68.6
A07p27360 Brassica napus HOM05D003886 ORTHO05D004587 8.1e-162 574.3 452 68.4
TPR.G6290 Trifolium pratense HOM05D003886 ORTHO05D004587 8.1e-162 574.3 419 71.8
BraA02t07251Z Brassica rapa HOM05D003886 ORTHO05D004587 1.4e-161 573.5 450 68.2
PSO782G4625 Papaver somniferum HOM05D003886 ORTHO05D004587 1.9e-158 563.1 453 66.9
Sp1g14830 Schrenkiella parvula HOM05D003886 ORTHO05D004587 1.2e-157 560.5 448 67.4
PSO063G1610 Papaver somniferum HOM05D003886 ORTHO05D004587 6.0e-157 558.1 453 66.2
SGA_v2.0_scaffold8G04472 Striga asiatica HOM05D003886 ORTHO05D004587 1.9e-155 553.1 514 61.5
HPP92_015734 Vanilla planifolia HOM05D003886 ORTHO05D004587 1.8e-153 546.6 453 62.5
Lsat_1_v5_gn_3_52161 Lactuca sativa HOM05D003886 ORTHO05D004587 4.9e-151 538.5 420 69.3
Lj5C312G11 Lonicera japonica HOM05D003886 ORTHO05D004587 4.6e-149 531.9 438 66.4
ATR0626G209 Amborella trichopoda HOM05D003886 ORTHO05D004587 8.2e-146 521.2 446 61.4
Zm00001eb308950 Zea mays HOM05D003886 ORTHO05D004587 4.0e-145 518.8 468 61.8
CDE02G1355 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 1.5e-144 516.9 424 62.7
Os08g0338900 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 3.4e-144 515.8 448 62.5
CDE03G0037 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 1.2e-141 507.3 431 62.9
ECA246G0124 Erigeron canadensis HOM05D003886 ORTHO05D004587 3.7e-138 495.7 415 66.7
Aqoxy6G00358 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 2.6e-136 489.6 451 60.3
SHI31130 Sapria himalayana HOM05D003886 ORTHO05D004587 6.1e-133 478.4 456 59.0
CDE05G0598 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 1.3e-127 460.7 427 56.7
arahy.Tifrunner.gnm1.ann1.78GTJP Arachis hypogaea HOM05D003886 ORTHO05D004587 5.1e-124 448.7 287 78.7
Ciclev10021199m.g Citrus clementina HOM05D003886 ORTHO05D004587 3.1e-121 439.5 316 71.2
CDE06G2124 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 9.1e-121 438.0 381 60.1
BolC2t09627H Brassica oleracea HOM05D003886 ORTHO05D004587 1.7e-119 433.7 341 67.2
Mapoly0014s0003 Marchantia polymorpha HOM05D003886 ORTHO05D004587 1.9e-118 430.3 470 51.5
AagrBONN_evm.TU.Sc2ySwM_228.1694 Anthoceros agrestis HOM05D003886 ORTHO05D004587 4.4e-115 419.1 451 52.5
SMO367G1242 Selaginella moellendorffii HOM05D003886 ORTHO05D004587 2.3e-108 396.7 460 50.9
Nitab4.5_0000389g0130 Nicotiana tabacum HOM05D003886 ORTHO05D004587 1.7e-106 390.6 249 80.7
Pp3c23_7050 Physcomitrium patens HOM05D003886 ORTHO05D004587 5.2e-100 369.0 454 49.6
ECA228G0002 Erigeron canadensis HOM05D003886 ORTHO05D004587 5.4e-97 359.0 318 64.2
ATR0751G140 Amborella trichopoda HOM05D003886 ORTHO05D004587 1.2e-96 357.8 320 60.3
Pp3c16_8390 Physcomitrium patens HOM05D003886 ORTHO05D004587 1.2e-85 321.2 450 45.1
Cpa.g.sc10.20 Carica papaya HOM05D003886 ORTHO05D004587 1.6e-80 304.3 193 79.8
PGSC0003DMG400013092 Solanum tuberosum HOM05D003886 ORTHO05D004587 6.8e-76 288.9 192 77.6
ClCG03G018020 Citrullus lanatus HOM05D003886 ORTHO05D004587 5.8e-75 285.8 284 55.3
CARHR072690 Cardamine hirsuta HOM05D003886 ORTHO05D004587 7.5e-75 285.4 192 74.5
CAN.G1586.1 Capsicum annuum HOM05D003886 ORTHO05D004587 1.0e-71 275.0 237 63.3
Nn8g38501 Nelumbo nucifera HOM05D003886 ORTHO05D004587 3.0e-71 273.5 189 70.9
CBR_g38268 Chara braunii HOM05D003886 ORTHO05D004587 1.1e-70 271.6 306 52.0
Ah.14g084510 Amaranthus hybridus HOM05D003886 ORTHO05D004587 1.5e-70 271.2 518 37.6
Os09g0284600 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 7.3e-70 268.9 217 66.4
Haze_16249 Corylus avellana HOM05D003886 ORTHO05D004587 1.7e-63 247.7 255 55.3
HanXRQChr08g0234351 Helianthus annuus HOM05D003886 ORTHO05D004587 1.9e-62 244.2 151 84.1
Cpa.g.sc10.19 Carica papaya HOM05D003886 ORTHO05D004587 2.4e-60 237.3 183 68.3
Zm00001eb097400 Zea mays HOM05D003886 ORTHO05D004587 1.4e-52 211.5 223 52.0
BcaB05g25167 Brassica carinata HOM05D003886 ORTHO05D004587 2.6e-51 207.2 119 85.7
ClCG03G018040 Citrullus lanatus HOM05D003886 ORTHO05D004587 1.4e-49 201.4 127 78.0
SEGI_11104 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 1.5e-46 191.4 291 41.9
Nitab4.5_0000389g0110 Nicotiana tabacum HOM05D003886 ORTHO05D004587 2.1e-45 187.6 169 56.8
SEGI_16863 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 6.2e-45 186.0 170 56.5
ATR0751G177 Amborella trichopoda HOM05D003886 ORTHO05D004587 1.1e-44 185.3 129 71.3
MCO08G116 Micromonas commoda HOM05D003886 ORTHO05D004587 8.4e-42 175.6 319 37.3
Cre03.g196400 Chlamydomonas reinhardtii HOM05D003886 ORTHO05D004587 6.7e-39 166.0 483 30.6
PRCOL_00004606 Prasinoderma coloniale HOM05D003886 ORTHO05D004587 2.1e-37 161.0 293 37.2
Aqoxy6G02601 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 6.7e-31 139.4 154 51.9
Haze_16250 Corylus avellana HOM05D003886 ORTHO05D004587 9.0e-28 129.0 100 63.0
arahy.Tifrunner.gnm1.ann1.6KK5MR Arachis hypogaea HOM05D003886 ORTHO05D004587 1.2e-27 128.6 125 59.2
MBI11_g15900_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 1.0e-26 125.6 87 71.3
arahy.Tifrunner.gnm1.ann1.RANL81 Arachis hypogaea HOM05D003886 ORTHO05D004587 3.8e-26 123.6 154 50.6
GSVIVG01024509001 Vitis vinifera HOM05D003886 ORTHO05D004587 7.1e-25 119.4 79 81.0
arahy.Tifrunner.gnm1.ann1.F9GSXH Arachis hypogaea HOM05D003886 ORTHO05D019782 6.7e-23 112.8 128 52.3
arahy.Tifrunner.gnm1.ann1.K7FQ1R Arachis hypogaea HOM05D003886 ORTHO05D019782 1.3e-21 108.6 114 57.9
BcaB05g25166 Brassica carinata HOM05D000912 ORTHO05D001232 1.3e-18 98.6 74 73.0
Lj5C312T17 Lonicera japonica HOM05D001538 ORTHO05D004587 2.0e-14 84.7 52 82.7
Dinv30975 Davidia involucrata HOM05D000190 ORTHO05D000113 6.3e-13 79.7 61 63.9
SHI49864 Sapria himalayana HOM05D003886 ORTHO05D004587 5.9e-11 73.2 43 83.7
Gohir.A07G077000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 7.7e-11 72.8 46 80.4
CAN.G1600.1 Capsicum annuum HOM05D003886 ORTHO05D004587 2.2e-10 71.2 46 73.9
arahy.Tifrunner.gnm1.ann1.EDPG13 Arachis hypogaea HOM05D003961 ORTHO05D038865 1.2e-08 65.5 128 39.1
Lsat_1_v5_gn_7_81560 Lactuca sativa HOM05D000267 ORTHO05D029881 2.7e-08 64.3 76 53.9
SHI26090 Sapria himalayana HOM05D005069 ORTHO05D006024 2.7e-08 64.3 63 50.8
ClCG03G018030 Citrullus lanatus HOM05D003886 ORTHO05D004587 4.7e-08 63.5 40 75.0
SHI44505 Sapria himalayana HOM05D003886 ORTHO05D009901 2.0e-06 58.2 28 85.7


User provided reference genes

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