Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.27614 Avicennia marina HOM05D004142 ORTHO05D005411 0.0e+00 1164.4 594 100.0
SGA_v2.0_scaffold98G29302 Striga asiatica HOM05D004142 ORTHO05D005411 7.7e-237 823.9 576 74.1
SalBow5G1400 Salvia bowleyana HOM05D004142 ORTHO05D005411 8.0e-226 787.3 586 71.2
SalBow5G4664 Salvia bowleyana HOM05D004142 ORTHO05D005411 3.0e-225 785.4 586 71.2
Migut.B01359 Erythranthe guttata HOM05D004142 ORTHO05D005411 1.6e-218 763.1 594 68.2
Dinv14174 Davidia involucrata HOM05D004142 ORTHO05D005411 1.7e-212 743.0 620 65.0
Sopen10g027050 Solanum pennellii HOM05D004142 ORTHO05D005411 3.0e-212 742.3 612 65.2
Solyc10g074560.2 Solanum lycopersicum HOM05D004142 ORTHO05D005411 9.5e-211 737.3 592 66.0
Peaxi162Scf01986g00004 Petunia axillaris HOM05D004142 ORTHO05D005411 1.8e-209 733.0 609 65.0
CAN.G765.24 Capsicum annuum HOM05D004142 ORTHO05D005411 1.3e-207 726.9 608 63.0
Actinidia20577 Actinidia chinensis HOM05D004142 ORTHO05D005411 2.9e-207 725.7 596 63.9
Thecc.02G146100 Theobroma cacao HOM05D004142 ORTHO05D005411 4.9e-207 724.9 591 64.3
CSS0035317 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 4.1e-206 721.8 596 63.3
Lj5C171T17 Lonicera japonica HOM05D004142 ORTHO05D005411 5.6e-203 711.4 667 59.5
Actinidia17993 Actinidia chinensis HOM05D004142 ORTHO05D005411 2.8e-202 709.1 600 63.2
CSS0014725 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 1.4e-201 706.8 589 63.7
Duzib052G0377 Durio zibethinus HOM05D004142 ORTHO05D005411 4.0e-201 705.3 624 60.9
Gorai.013G064000 Gossypium raimondii HOM05D004142 ORTHO05D005411 5.2e-201 704.9 612 61.8
Ciclev10028022m.g Citrus clementina HOM05D004142 ORTHO05D005411 1.2e-200 703.7 620 61.6
Rhsim11G0198100 Rhododendron simsii HOM05D004142 ORTHO05D005411 1.5e-200 703.4 579 64.1
Atru.chr3.3247 Acer truncatum HOM05D004142 ORTHO05D005411 5.8e-200 701.4 620 61.1
Gohir.D13G057300 Gossypium hirsutum HOM05D004142 ORTHO05D005411 9.9e-200 700.7 612 61.4
Gohir.A13G065000 Gossypium hirsutum HOM05D004142 ORTHO05D005411 2.9e-199 699.1 612 61.3
QL11p056391 Quercus lobata HOM05D004142 ORTHO05D005411 5.4e-198 694.9 591 63.3
Potri.009G168100 Populus trichocarpa HOM05D004142 ORTHO05D005411 4.6e-197 691.8 593 61.4
Eucgr.G01885 Eucalyptus grandis HOM05D004142 ORTHO05D005411 1.7e-196 689.9 613 61.3
PGR042G3440 Punica granatum HOM05D004142 ORTHO05D005411 1.7e-196 689.9 614 60.9
Cfa005371 Carpinus fangiana HOM05D004142 ORTHO05D005411 8.6e-196 687.6 603 62.4
Cc09_g10830 Coffea canephora HOM05D004142 ORTHO05D005411 1.1e-195 687.2 582 64.1
FAN24G0393 Fragaria x ananassa HOM05D004142 ORTHO05D005411 2.5e-195 686.0 625 59.4
Prupe.8G180000 Prunus persica HOM05D004142 ORTHO05D005411 2.5e-195 686.0 621 59.4
CiPaw.06G115400 Carya illinoinensis HOM05D004142 ORTHO05D005411 4.3e-195 685.3 603 61.5
CANSAT25G0210 Cannabis sativa HOM05D004142 ORTHO05D005411 7.3e-195 684.5 588 62.9
MD10G1141700 Malus domestica HOM05D004142 ORTHO05D005411 1.2e-194 683.7 621 59.6
TWI75G0433 Tripterygium wilfordii HOM05D004142 ORTHO05D005411 1.4e-193 680.2 585 62.7
TAR633G0693 Trochodendron aralioides HOM05D004142 ORTHO05D005411 3.4e-192 675.6 620 59.2
Manes.04G066800 Manihot esculenta HOM05D004142 ORTHO05D005411 5.4e-190 668.3 607 58.6
Phvul.008G235900 Phaseolus vulgaris HOM05D004142 ORTHO05D005411 5.4e-190 668.3 599 59.8
RcHm_v2.0_Chr6g0280901 Rosa chinensis HOM05D004142 ORTHO05D005411 7.8e-189 664.5 619 58.2
EL10Ac9g21530 Beta vulgaris HOM05D004142 ORTHO05D005411 1.3e-188 663.7 578 62.6
DCAR_005486 Daucus carota HOM05D004142 ORTHO05D005411 1.7e-188 663.3 594 61.6
TWI31G1182 Tripterygium wilfordii HOM05D004142 ORTHO05D005411 9.6e-187 657.5 614 59.0
ECA233G5375 Erigeron canadensis HOM05D004142 ORTHO05D005411 2.8e-186 656.0 573 62.1
Nitab4.5_0005657g0020 Nicotiana tabacum HOM05D004142 ORTHO05D005411 6.2e-186 654.8 619 59.8
Glyma.02G245400 Glycine max HOM05D004142 ORTHO05D005411 8.1e-186 654.4 579 60.8
CSS0002990 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 1.1e-185 654.1 616 58.3
Sabra09G0130600 Salix brachista HOM05D004142 ORTHO05D005852 1.1e-185 654.1 592 59.5
VMungo0647G1269 Vigna mungo HOM05D004142 ORTHO05D005411 1.4e-185 653.7 583 59.9
BcaB07g31738 Brassica carinata HOM05D004142 ORTHO05D005411 2.4e-185 652.9 593 58.2
Glyma.14G215500 Glycine max HOM05D004142 ORTHO05D005411 9.0e-185 651.0 597 58.6
Psat2g043640 Pisum sativum HOM05D004142 ORTHO05D005411 1.5e-184 650.2 601 57.9
HanXRQChr16g0515111 Helianthus annuus HOM05D004142 ORTHO05D005411 5.8e-184 648.3 573 61.6
CARHR293590 Cardamine hirsuta HOM05D004142 ORTHO05D005411 7.6e-184 647.9 594 58.2
HanXRQChr09g0239911 Helianthus annuus HOM05D004142 ORTHO05D005411 2.2e-183 646.4 569 61.9
Aa31LG8G14620 Aethionema arabicum HOM05D004142 ORTHO05D005411 6.4e-183 644.8 592 58.4
Ah.05g178840 Amaranthus hybridus HOM05D004142 ORTHO05D005411 1.1e-182 644.0 572 61.4
Haze_02000 Corylus avellana HOM05D004142 ORTHO05D005411 1.4e-182 643.7 638 56.9
Sc08g0002210 Simmondsia chinensis HOM05D004142 ORTHO05D005411 1.2e-181 640.6 591 58.2
Hund06363 Selenicereus undatus HOM05D004142 ORTHO05D005411 1.6e-181 640.2 578 59.7
Sp3g30590 Schrenkiella parvula HOM05D004142 ORTHO05D005411 2.1e-181 639.8 602 57.5
FAN15G2670 Fragaria x ananassa HOM05D004142 ORTHO05D005411 2.7e-181 639.4 633 55.8
Lalb_Chr04g0251341 Lupinus albus HOM05D004142 ORTHO05D005411 2.7e-181 639.4 594 58.1
Thhalv10022610m.g Eutrema salsugineum HOM05D004142 ORTHO05D005411 3.5e-181 639.0 600 57.2
AL3G50110 Arabidopsis lyrata HOM05D004142 ORTHO05D005411 1.3e-180 637.1 587 57.4
TPR.G8874 Trifolium pratense HOM05D004142 ORTHO05D005411 1.8e-180 636.7 591 57.2
C09p13280 Brassica napus HOM05D004142 ORTHO05D005411 6.7e-180 634.8 612 57.0
BolC9t54221H Brassica oleracea HOM05D004142 ORTHO05D005411 6.7e-180 634.8 612 57.0
BcaC04g22983 Brassica carinata HOM05D004142 ORTHO05D005411 1.1e-179 634.0 604 56.1
COL.COLO4_34310 Corchorus olitorius HOM05D004142 ORTHO05D005411 1.1e-179 634.0 607 57.8
Carub.0003s3119 Capsella rubella HOM05D004142 ORTHO05D005411 1.5e-179 633.6 584 57.4
Nn5g31006 Nelumbo nucifera HOM05D004142 ORTHO05D005411 1.9e-179 633.3 584 60.4
Medtr5g078780 Medicago truncatula HOM05D004142 ORTHO05D005411 5.6e-179 631.7 581 57.7
BcaB03g16472 Brassica carinata HOM05D004142 ORTHO05D005411 8.1e-178 627.9 592 56.4
A07p03800 Brassica napus HOM05D004142 ORTHO05D005411 8.1e-178 627.9 598 56.7
AT2G17250 Arabidopsis thaliana HOM05D004142 ORTHO05D005411 1.1e-177 627.5 581 56.5
BraA07t28174Z Brassica rapa HOM05D004142 ORTHO05D005411 1.8e-177 626.7 599 56.3
Sed0023655 Sechium edule HOM05D004142 ORTHO05D005411 1.5e-176 623.6 587 58.6
BraA09t36766Z Brassica rapa HOM05D004142 ORTHO05D005411 2.0e-176 623.2 594 55.6
CsaV3_7G001920 Cucumis sativus L. HOM05D004142 ORTHO05D005411 2.6e-176 622.9 586 58.5
A09p11250 Brassica napus HOM05D004142 ORTHO05D005411 5.8e-176 621.7 593 55.8
MELO3C013248.2 Cucumis melo HOM05D004142 ORTHO05D005411 1.9e-174 616.7 578 58.3
Aqoxy6G01597 Aquilegia oxysepala HOM05D004142 ORTHO05D005411 5.1e-172 608.6 609 55.8
Ca_01556_v3 Cicer arietinum L. HOM05D004142 ORTHO05D005411 6.7e-172 608.2 614 54.9
LjContig00141g0017492 Lotus japonicus HOM05D004142 ORTHO05D005411 6.7e-172 608.2 595 55.6
vmacro02340 Vaccinium macrocarpon HOM05D004142 ORTHO05D005411 1.1e-171 607.4 582 57.7
Lsat_1_v5_gn_5_183861 Lactuca sativa HOM05D004142 ORTHO05D005411 1.5e-171 607.1 571 59.0
THA.LOC104819692 Tarenaya hassleriana HOM05D004142 ORTHO05D005411 7.4e-171 604.7 619 54.8
Nitab4.5_0001700g0140 Nicotiana tabacum HOM05D004142 ORTHO05D005411 1.8e-169 600.1 604 57.0
CDE05G3311 Ceratophyllum demersum HOM05D004142 ORTHO05D005411 1.0e-167 594.3 614 54.2
arahy.Tifrunner.gnm1.ann1.FRA838 Arachis hypogaea HOM05D004142 ORTHO05D005411 2.9e-167 592.8 630 54.3
PSO541G0415 Papaver somniferum HOM05D004142 ORTHO05D005411 7.9e-165 584.7 587 54.2
Os04g0585300 Oryza sativa ssp. japonica HOM05D004142 ORTHO05D005411 1.5e-163 580.5 602 53.2
PSO675G0945 Papaver somniferum HOM05D004142 ORTHO05D005411 1.9e-163 580.1 587 53.8
arahy.Tifrunner.gnm1.ann1.52DH7S Arachis hypogaea HOM05D004142 ORTHO05D005411 3.3e-163 579.3 637 52.6
CAN.G397.37 Capsicum annuum HOM05D004142 ORTHO05D005411 2.1e-162 576.6 478 62.6
ClCG02G003400 Citrullus lanatus HOM05D004142 ORTHO05D005411 1.8e-161 573.5 584 55.7
arahy.Tifrunner.gnm1.ann1.0H97XI Arachis hypogaea HOM05D004142 ORTHO05D005411 1.2e-160 570.9 624 53.0
CSS0034003 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 1.6e-157 560.5 605 53.7
Zm00001eb428130 Zea mays HOM05D004142 ORTHO05D005411 5.7e-155 552.0 584 51.2
BolC7t41018H Brassica oleracea HOM05D004142 ORTHO05D005411 1.3e-154 550.8 559 54.4
ATR0807G091 Amborella trichopoda HOM05D004142 ORTHO05D005411 2.8e-154 549.7 598 52.8
AUR62013175 Chenopodium quinoa HOM05D004142 ORTHO05D005411 3.7e-154 549.3 580 54.1
Atru.chr5.3556 Acer truncatum HOM05D004142 ORTHO05D005411 2.4e-153 546.6 618 51.8
FvH4_2g16780 Fragaria vesca HOM05D004142 ORTHO05D005411 6.9e-153 545.0 496 59.5
BcaC06g36246 Brassica carinata HOM05D004142 ORTHO05D005411 3.8e-151 539.3 584 52.1
C07p06050 Brassica napus HOM05D004142 ORTHO05D005411 2.4e-145 520.0 577 50.8
unitig_578.g16758 Utricularia gibba HOM05D004142 ORTHO05D005411 6.5e-143 511.9 576 52.3
MD05G1138800 Malus domestica HOM05D004142 ORTHO05D005411 2.2e-138 496.9 588 51.5
AUR62010174 Chenopodium quinoa HOM05D004142 ORTHO05D005411 2.6e-131 473.4 460 57.6
Mapoly0043s0054 Marchantia polymorpha HOM05D004142 ORTHO05D005411 8.2e-130 468.4 608 45.6
TAR381G0855 Trochodendron aralioides HOM05D004142 ORTHO05D005411 4.1e-129 466.1 473 56.9
Pp3c9_12610 Physcomitrium patens HOM05D004142 ORTHO05D005411 2.7e-120 436.8 585 43.1
AagrBONN_evm.TU.Sc2ySwM_228.5327 Anthoceros agrestis HOM05D004142 ORTHO05D005411 1.9e-118 430.6 622 42.6
Oeu037462.1 Olea europaea HOM05D004142 ORTHO05D005411 2.5e-110 403.7 378 60.3
BcaB07g31740 Brassica carinata HOM05D004142 ORTHO05D005411 1.4e-92 344.7 474 44.7
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 7.5e-91 339.0 568 37.9
Cpa.g.sc60.17 Carica papaya HOM05D004142 ORTHO05D005411 3.5e-88 330.1 359 54.0
SHI03795 Sapria himalayana HOM05D004142 ORTHO05D005411 7.3e-86 322.4 264 61.4
CBR_g44269 Chara braunii HOM05D004142 ORTHO05D005411 3.4e-75 287.0 361 45.2
ECA246G3488 Erigeron canadensis HOM05D004142 ORTHO05D005411 7.1e-73 279.3 341 48.1
HPP92_025664 Vanilla planifolia HOM05D004142 ORTHO05D005411 1.0e-71 275.4 290 53.4
MD11G1014400 Malus domestica HOM05D004142 ORTHO05D005411 9.6e-70 268.9 333 48.6
PRCOL_00005396 Prasinoderma coloniale HOM05D004142 ORTHO05D005411 2.8e-61 240.7 284 45.4
Cre01.g068377 Chlamydomonas reinhardtii HOM05D004142 ORTHO05D005411 1.5e-59 235.0 306 41.5
Eucgr.H04975 Eucalyptus grandis HOM05D004142 ORTHO05D005411 1.1e-52 212.2 240 50.0
Ca_05793_v3 Cicer arietinum L. HOM05D004142 ORTHO05D005411 2.4e-52 211.1 184 58.2
GSVIVG01004114001 Vitis vinifera HOM05D004142 ORTHO05D005411 2.4e-52 211.1 227 53.7
Oeu037461.1 Olea europaea HOM05D004142 ORTHO05D005411 3.1e-52 210.7 119 86.6
Cpa.g.sc60.19 Carica papaya HOM05D004142 ORTHO05D005411 2.6e-51 207.6 199 58.8
Hma1.2p1_0796F.1_g219330 Hydrangea macrophylla HOM05D004142 ORTHO05D005411 6.9e-44 183.0 117 73.5
MCO08G220 Micromonas commoda HOM05D004142 ORTHO05D005411 2.0e-43 181.4 219 42.0
Cfa024410 Carpinus fangiana HOM05D004142 ORTHO05D005411 3.2e-41 174.1 285 34.7
SEGI_26341 Sequoiadendron giganteum HOM05D004142 ORTHO05D005411 3.2e-41 174.1 128 68.8
SHI03796 Sapria himalayana HOM05D004142 ORTHO05D005411 4.2e-41 173.7 181 48.6
GSVIVG01004442001 Vitis vinifera HOM05D004142 ORTHO05D005411 5.1e-39 166.8 151 60.3
HPP92_025663 Vanilla planifolia HOM05D004142 ORTHO05D005411 6.7e-39 166.4 169 52.7
TAR318G0001 Trochodendron aralioides HOM05D004142 ORTHO05D005411 2.5e-38 164.5 167 54.5
Zm00001eb152690 Zea mays HOM05D004142 ORTHO05D000502 7.7e-35 152.9 98 74.5
AagrBONN_evm.TU.Sc2ySwM_228.5299 Anthoceros agrestis HOM05D004142 ORTHO05D005411 8.5e-34 149.4 151 53.0
Lsat_1_v5_gn_5_64620 Lactuca sativa HOM05D004142 ORTHO05D005411 8.5e-34 149.4 134 60.4
AagrBONN_evm.TU.Sc2ySwM_228.5300 Anthoceros agrestis HOM05D004142 ORTHO05D005411 9.4e-33 146.0 288 34.7
SEGI_03267 Sequoiadendron giganteum HOM05D004142 ORTHO05D005411 2.6e-30 137.9 115 59.1
SEGI_12604 Sequoiadendron giganteum HOM05D004142 ORTHO05D005411 3.3e-30 137.5 139 51.8
CSS0025136 Camellia sinensis var. sinensis HOM05D004142 ORTHO05D005411 2.2e-29 134.8 167 47.9
BcaB07g31739 Brassica carinata HOM05D004142 ORTHO05D005411 5.0e-26 123.6 228 36.0
Zm00001eb177550 Zea mays HOM05D004142 ORTHO05D005411 7.2e-25 119.8 87 69.0
FAN27G1246 Fragaria x ananassa HOM05D004142 ORTHO05D005411 1.6e-24 118.6 125 55.2
Zm00001eb282240 Zea mays HOM05D004142 ORTHO05D005411 1.6e-24 118.6 87 69.0
Hma1.2p1_0151F.1_g067370 Hydrangea macrophylla HOM05D004142 ORTHO05D005411 8.0e-24 116.3 113 59.3
Oeu003432.1 Olea europaea HOM05D004142 ORTHO05D005411 1.8e-23 115.2 108 53.7
TPR.G40409 Trifolium pratense HOM05D004142 ORTHO05D005411 1.1e-22 112.5 65 80.0
SEGI_29991 Sequoiadendron giganteum HOM05D004142 ORTHO05D031210 4.4e-22 110.5 178 37.6
Eucgr.H04983 Eucalyptus grandis HOM05D004142 ORTHO05D005411 2.6e-19 101.3 70 67.1
Zm00001eb112060 Zea mays HOM05D004142 ORTHO05D005983 4.5e-19 100.5 74 68.9
BcaB07g31742 Brassica carinata HOM05D004142 ORTHO05D005411 1.0e-18 99.4 175 36.6
MD11G1014300 Malus domestica HOM05D004142 ORTHO05D005411 4.2e-17 94.0 85 62.4
BcaC04g22984 Brassica carinata HOM05D004142 ORTHO05D005411 9.4e-17 92.8 77 66.2
Psat3g160080 Pisum sativum HOM05D004142 ORTHO05D005411 1.5e-14 85.5 100 45.0
Medtr5g078810 Medicago truncatula HOM05D004142 ORTHO05D005411 9.7e-14 82.8 69 63.8
Lsat_1_v5_gn_5_140320 Lactuca sativa HOM05D004142 ORTHO05D036439 2.2e-13 81.6 86 54.7
Zm00001eb028530 Zea mays HOM05D004142 ORTHO05D000502 8.2e-13 79.7 64 64.1
SEGI_00997 Sequoiadendron giganteum HOM05D004142 ORTHO05D031210 6.1e-08 63.5 120 38.3
TPR.G18886 Trifolium pratense HOM05D000005 ORTHO05D000012 6.1e-08 63.5 48 66.7
ATR0763G063 Amborella trichopoda HOM05D004092 ORTHO05D005448 2.6e-06 58.2 135 28.9
Mapoly0001s0281 Marchantia polymorpha HOM05D004092 ORTHO05D005448 4.4e-06 57.4 184 26.1


User provided reference genes

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