Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 1.5e-141 506.1 245 100.0
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 1.4e-78 297.0 191 72.8
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 3.3e-77 292.4 191 73.8
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 1.7e-76 290.0 185 73.0
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 1.8e-75 286.6 190 71.1
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 1.6e-74 283.5 190 70.5
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 2.6e-74 282.7 190 71.6
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 4.5e-74 282.0 193 74.1
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 4.5e-74 282.0 191 73.3
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 6.5e-73 278.1 210 66.7
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 3.2e-72 275.8 190 69.5
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 4.2e-72 275.4 177 71.2
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 2.1e-71 273.1 190 69.5
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 3.6e-71 272.3 188 68.1
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 4.7e-71 271.9 212 63.2
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 1.0e-70 270.8 201 66.7
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 2.3e-70 269.6 255 56.9
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 1.5e-69 266.9 181 72.9
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 9.7e-69 264.2 179 71.5
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 9.7e-69 264.2 178 71.9
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 1.3e-68 263.8 160 77.5
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 1.7e-68 263.5 160 77.5
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 2.2e-68 263.1 186 68.3
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 2.8e-68 262.7 185 71.9
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 4.8e-68 261.9 222 62.2
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 4.8e-68 261.9 175 70.9
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 2.4e-67 259.6 183 69.4
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 3.1e-67 259.2 192 68.8
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 4.1e-67 258.8 155 77.4
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 5.3e-67 258.5 216 62.0
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 7.0e-67 258.1 173 69.4
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 7.7e-66 254.6 159 76.1
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 7.7e-66 254.6 203 63.5
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 7.7e-66 254.6 226 59.3
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 1.0e-65 254.2 210 57.6
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 1.0e-65 254.2 179 68.7
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 2.9e-65 252.7 177 70.6
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 3.8e-65 252.3 158 73.4
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 5.0e-65 251.9 176 69.9
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 6.5e-65 251.5 174 70.7
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 6.5e-65 251.5 183 70.5
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 8.5e-65 251.1 216 59.3
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 2.5e-64 249.6 174 64.4
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 5.5e-64 248.4 201 62.2
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 9.4e-64 247.7 201 62.2
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 1.6e-63 246.9 157 73.2
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 2.7e-63 246.1 230 57.4
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 1.0e-62 244.2 174 67.2
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 1.4e-62 243.8 183 67.8
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 3.0e-62 242.7 193 62.7
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 4.0e-62 242.3 172 68.6
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 8.8e-62 241.1 180 65.0
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 1.5e-61 240.4 196 61.7
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 2.6e-61 239.6 161 68.3
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 3.4e-61 239.2 190 63.2
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 1.7e-60 236.9 160 72.5
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 2.2e-60 236.5 183 63.9
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 2.2e-60 236.5 177 62.1
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 2.8e-60 236.1 183 63.9
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 2.8e-60 236.1 183 63.9
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 3.7e-60 235.7 167 64.1
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 4.8e-60 235.3 191 59.7
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 6.3e-60 235.0 173 63.6
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 1.4e-59 233.8 190 62.1
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 2.4e-59 233.0 174 64.4
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 4.1e-59 232.3 186 59.7
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 4.1e-59 232.3 167 63.5
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 5.4e-59 231.9 156 66.7
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 9.1e-59 231.1 174 63.8
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 9.1e-59 231.1 166 65.7
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 2.7e-58 229.6 183 62.8
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 2.7e-58 229.6 183 62.8
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 1.0e-57 227.6 160 66.9
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 1.0e-57 227.6 181 63.0
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 1.0e-57 227.6 156 66.7
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 1.3e-57 227.3 165 64.8
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 1.3e-57 227.3 174 61.5
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 2.3e-57 226.5 167 64.7
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 3.8e-57 225.7 167 64.1
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 8.6e-57 224.6 167 64.1
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 2.5e-56 223.0 181 59.7
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 2.1e-55 219.9 166 64.5
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 3.6e-55 219.2 175 61.7
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 6.1e-55 218.4 175 61.1
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 6.8e-54 214.9 141 74.5
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 8.8e-54 214.5 141 73.8
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 8.3e-52 208.0 139 71.9
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 2.0e-50 203.4 156 60.9
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 4.3e-48 195.7 202 54.5
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 1.6e-47 193.7 183 54.6
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 6.1e-47 191.8 152 61.2
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.8e-46 190.3 156 57.7
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 3.0e-46 189.5 219 47.9
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 1.2e-45 187.6 141 62.4
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 4.4e-45 185.7 152 57.2
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 5.7e-45 185.3 152 60.5
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 6.4e-44 181.8 120 70.0
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 6.6e-41 171.8 170 54.7
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 9.5e-40 167.9 152 57.2
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 7.8e-34 148.3 119 59.7
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 8.1e-31 138.3 197 44.7
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 1.9e-27 127.1 83 71.1
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 6.6e-25 118.6 80 70.0
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.0e-21 107.1 89 59.6
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 3.0e-17 93.2 150 36.7
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 1.2e-13 81.3 90 52.2
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 5.4e-11 72.4 119 37.0
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 4.3e-08 62.8 52 55.8
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 5.6e-08 62.4 41 63.4


User provided reference genes

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