Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.27486 Avicennia marina HOM05D003976 ORTHO05D004711 0.0e+00 2086.6 1076 100.0
Migut.F01955 Erythranthe guttata HOM05D003976 ORTHO05D004711 0.0e+00 1807.0 1075 86.3
SalBow4G0398 Salvia bowleyana HOM05D003976 ORTHO05D004711 0.0e+00 1681.0 1099 80.4
Oeu007408.1 Olea europaea HOM05D003976 ORTHO05D004711 0.0e+00 1652.1 1073 80.2
Dinv31232 Davidia involucrata HOM05D003976 ORTHO05D004711 0.0e+00 1645.9 1080 78.2
CSS0009675 Camellia sinensis var. sinensis HOM05D003976 ORTHO05D004711 0.0e+00 1625.9 1079 77.8
GSVIVG01016219001 Vitis vinifera HOM05D003976 ORTHO05D004711 0.0e+00 1617.4 1088 77.2
Cfa001691 Carpinus fangiana HOM05D003976 ORTHO05D004711 0.0e+00 1602.8 1077 77.4
TWI63G1397 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 0.0e+00 1586.6 1080 75.5
TAR633G0511 Trochodendron aralioides HOM05D003976 ORTHO05D004711 0.0e+00 1583.9 1079 75.6
Sopen11g004150 Solanum pennellii HOM05D003976 ORTHO05D004711 0.0e+00 1570.4 1080 75.8
Prupe.2G208700 Prunus persica HOM05D003976 ORTHO05D004711 0.0e+00 1565.8 1078 75.1
Nn4g25176 Nelumbo nucifera HOM05D003976 ORTHO05D004711 0.0e+00 1564.3 1080 74.9
Solyc11g008340.3 Solanum lycopersicum HOM05D003976 ORTHO05D004711 0.0e+00 1562.4 1080 75.6
RcHm_v2.0_Chr1g0362571 Rosa chinensis HOM05D003976 ORTHO05D004711 0.0e+00 1560.4 1078 74.8
Aqoxy1G01141 Aquilegia oxysepala HOM05D003976 ORTHO05D004711 0.0e+00 1557.7 1079 73.8
TWI15G0187 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 0.0e+00 1557.3 1079 74.3
Thecc.10G083800 Theobroma cacao HOM05D003976 ORTHO05D004711 0.0e+00 1555.4 1077 75.0
Duzib114G0598 Durio zibethinus HOM05D003976 ORTHO05D004711 0.0e+00 1553.9 1079 75.2
MD01G1103100 Malus domestica HOM05D003976 ORTHO05D004711 0.0e+00 1550.0 1077 74.9
PGR044G0607 Punica granatum HOM05D003976 ORTHO05D004711 0.0e+00 1550.0 1077 73.8
CANSAT56G1655 Cannabis sativa HOM05D003976 ORTHO05D004711 0.0e+00 1549.6 1078 74.4
CiPaw.01G268500 Carya illinoinensis HOM05D003976 ORTHO05D004711 0.0e+00 1548.9 1078 75.0
Potri.010G227100 Populus trichocarpa HOM05D003976 ORTHO05D004711 0.0e+00 1541.9 1077 74.7
FvH4_7g18760 Fragaria vesca HOM05D003976 ORTHO05D004711 0.0e+00 1538.5 1078 74.2
Manes.01G054600 Manihot esculenta HOM05D003976 ORTHO05D004711 0.0e+00 1532.3 1079 73.8
Nitab4.5_0001450g0090 Nicotiana tabacum HOM05D003976 ORTHO05D004711 0.0e+00 1520.8 1163 70.9
Potri.008G035300 Populus trichocarpa HOM05D003976 ORTHO05D004711 0.0e+00 1519.2 1078 73.8
PSO063G6915 Papaver somniferum HOM05D003976 ORTHO05D004711 0.0e+00 1516.9 1081 73.0
Lj5g0000763 Lotus japonicus HOM05D003976 ORTHO05D004711 0.0e+00 1510.4 1077 73.3
Lj2C20G12 Lonicera japonica HOM05D003976 ORTHO05D004711 0.0e+00 1509.6 1092 72.6
FAN03G2922 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1507.3 1078 72.9
FAN06G0006 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1507.3 1078 73.2
PSO339G0981 Papaver somniferum HOM05D003976 ORTHO05D004711 0.0e+00 1506.9 1081 72.6
DCAR_019085 Daucus carota HOM05D003976 ORTHO05D004711 0.0e+00 1498.8 1082 73.0
Glyma.10G207900 Glycine max HOM05D003976 ORTHO05D004711 0.0e+00 1497.3 1076 72.5
Atru.chr12.845 Acer truncatum HOM05D003976 ORTHO05D004711 0.0e+00 1494.6 1049 74.0
Lalb_Chr06g0170321 Lupinus albus HOM05D003976 ORTHO05D004711 0.0e+00 1488.4 1077 71.5
Nitab4.5_0001659g0180 Nicotiana tabacum HOM05D003976 ORTHO05D004711 0.0e+00 1484.9 1104 72.0
Sc06g0007810 Simmondsia chinensis HOM05D003976 ORTHO05D004711 0.0e+00 1484.9 1079 72.2
Glyma.20G182800 Glycine max HOM05D003976 ORTHO05D004711 0.0e+00 1483.4 1088 71.5
Ca_00795_v3 Cicer arietinum L. HOM05D003976 ORTHO05D004711 0.0e+00 1481.8 1076 71.9
MD07G1169800 Malus domestica HOM05D003976 ORTHO05D004711 0.0e+00 1481.8 1033 74.1
Sed0018764 Sechium edule HOM05D003976 ORTHO05D004711 0.0e+00 1478.8 1079 71.1
Medtr5g017640 Medicago truncatula HOM05D003976 ORTHO05D004711 0.0e+00 1478.0 1076 71.7
Medtr8g104855 Medicago truncatula HOM05D003976 ORTHO05D004711 0.0e+00 1478.0 1082 71.4
CsaV3_6G036710 Cucumis sativus L. HOM05D003976 ORTHO05D004711 0.0e+00 1471.4 1078 70.8
Gohir.A05G414300 Gossypium hirsutum HOM05D003976 ORTHO05D004711 0.0e+00 1469.9 1079 71.6
Gohir.D04G001800 Gossypium hirsutum HOM05D003976 ORTHO05D004711 0.0e+00 1469.5 1079 71.5
Gorai.012G002900 Gossypium raimondii HOM05D003976 ORTHO05D004711 0.0e+00 1468.8 1079 71.5
TPR.G32679 Trifolium pratense HOM05D003976 ORTHO05D004711 0.0e+00 1467.6 1076 72.0
Oeu033874.1 Olea europaea HOM05D003976 ORTHO05D004711 0.0e+00 1466.8 947 80.7
VMungo0251G3371 Vigna mungo HOM05D003976 ORTHO05D004711 0.0e+00 1463.4 1078 71.1
Phvul.007G098800 Phaseolus vulgaris HOM05D003976 ORTHO05D004711 0.0e+00 1453.3 1076 71.3
THA.LOC104826898 Tarenaya hassleriana HOM05D003976 ORTHO05D004711 0.0e+00 1429.5 1078 69.2
ECA238G0457 Erigeron canadensis HOM05D003976 ORTHO05D004711 0.0e+00 1427.5 1078 69.4
SGA_v2.0_scaffold100G29552 Striga asiatica HOM05D003976 ORTHO05D004711 0.0e+00 1415.2 1262 64.3
Sp3g08650 Schrenkiella parvula HOM05D003976 ORTHO05D004711 0.0e+00 1406.0 1078 68.4
Carub.0003s0956 Capsella rubella HOM05D003976 ORTHO05D004711 0.0e+00 1405.6 1078 68.2
Ciclev10030617m.g Citrus clementina HOM05D003976 ORTHO05D004711 0.0e+00 1401.3 1077 69.8
AT3G10380 Arabidopsis thaliana HOM05D003976 ORTHO05D004711 0.0e+00 1398.6 1078 68.0
CARHR084860 Cardamine hirsuta HOM05D003976 ORTHO05D004711 0.0e+00 1388.6 1078 67.7
Nn3g18724 Nelumbo nucifera HOM05D003976 ORTHO05D004711 0.0e+00 1388.6 1077 68.2
HanXRQChr14g0456581 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1387.9 1077 67.9
HanXRQChr05g0161261 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1381.7 1077 67.6
AL3G21710 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 0.0e+00 1380.9 1078 67.3
MBI18_g27471_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 0.0e+00 1379.0 1001 72.1
HanXRQChr14g0455711 Helianthus annuus HOM05D003976 ORTHO05D004711 0.0e+00 1378.2 1078 67.6
C05p57780 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1377.5 1094 66.7
BolC5t34435H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1377.1 1094 66.7
Thhalv10019960m.g Eutrema salsugineum HOM05D003976 ORTHO05D004711 0.0e+00 1376.3 1083 66.7
A05p38770 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1374.8 1079 67.2
MELO3C019825.2 Cucumis melo HOM05D003976 ORTHO05D004711 0.0e+00 1371.7 1093 66.3
BolC1t05404H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1355.9 1113 65.1
Sabra08G0023600 Salix brachista HOM05D003976 ORTHO05D004711 0.0e+00 1355.9 1102 67.2
C03p44100 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1355.5 1098 65.3
Haze_16845 Corylus avellana HOM05D003976 ORTHO05D004711 0.0e+00 1354.3 1152 65.8
BcaB04g21214 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1349.0 1079 65.9
BraA01t04258Z Brassica rapa HOM05D003976 ORTHO05D004711 0.0e+00 1348.6 1113 64.4
Sabra10G0175200 Salix brachista HOM05D003976 ORTHO05D004711 0.0e+00 1348.2 1187 63.1
Psat7g009400 Pisum sativum HOM05D003976 ORTHO05D004711 0.0e+00 1340.5 992 70.4
A01p41880 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1337.0 1066 66.3
BcaC09g48100 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1331.2 1064 66.2
BolC3t16685H Brassica oleracea HOM05D003976 ORTHO05D004711 0.0e+00 1325.8 1098 64.3
A03p36500 Brassica napus HOM05D003976 ORTHO05D004711 0.0e+00 1324.7 1098 64.6
AUR62023345 Chenopodium quinoa HOM05D003976 ORTHO05D004711 0.0e+00 1320.1 1094 65.5
BcaC05g29471 Brassica carinata HOM05D003976 ORTHO05D004711 0.0e+00 1317.4 1078 65.3
FAN01G1125 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1312.7 1076 65.8
AUR62013811 Chenopodium quinoa HOM05D003976 ORTHO05D004711 0.0e+00 1306.6 1117 64.3
FAN06G1302 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1305.8 1108 64.4
BraA03t12817Z Brassica rapa HOM05D003976 ORTHO05D004711 0.0e+00 1304.7 1098 64.0
unitig_46.g18603 Utricularia gibba HOM05D003976 ORTHO05D004711 0.0e+00 1298.1 1080 66.1
Lsat_1_v5_gn_2_113061 Lactuca sativa HOM05D003976 ORTHO05D004711 0.0e+00 1294.6 1086 65.1
Aa31LG3G2960 Aethionema arabicum HOM05D003976 ORTHO05D004711 0.0e+00 1293.1 1083 64.2
HPP92_022853 Vanilla planifolia HOM05D003976 ORTHO05D004711 0.0e+00 1285.8 1105 62.6
SEGI_27589 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 0.0e+00 1283.5 1069 62.8
Os08g0318500 Oryza sativa ssp. japonica HOM05D003976 ORTHO05D004711 0.0e+00 1280.4 1077 62.7
Zm00001eb330040 Zea mays HOM05D003976 ORTHO05D004711 0.0e+00 1272.7 1076 63.3
ClCG08G007720 Citrullus lanatus HOM05D003976 ORTHO05D004711 0.0e+00 1272.3 1044 65.3
CDE10G1014 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 0.0e+00 1254.2 1027 65.1
EL10Ac1g00696 Beta vulgaris HOM05D003976 ORTHO05D004711 0.0e+00 1248.0 1181 61.1
FAN10G1353 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1229.2 1064 63.0
FAN10G3044 Fragaria x ananassa HOM05D003976 ORTHO05D004711 0.0e+00 1203.7 1063 62.3
Eucgr.K02187 Eucalyptus grandis HOM05D003976 ORTHO05D004711 0.0e+00 1162.9 889 68.7
arahy.Tifrunner.gnm1.ann1.9SI57B Arachis hypogaea HOM05D003976 ORTHO05D004711 0.0e+00 1162.5 1069 61.0
Hma1.2p1_0384F.1_g140840 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 0.0e+00 1132.9 744 77.3
ATR0730G009 Amborella trichopoda HOM05D003976 ORTHO05D004711 0.0e+00 1126.3 905 65.9
Gohir.D10G210600 Gossypium hirsutum HOM05D003976 ORTHO05D004711 2.6e-299 1032.3 918 62.2
Mapoly0170s0008 Marchantia polymorpha HOM05D003976 ORTHO05D004711 2.1e-288 996.1 1082 51.4
Pp3c16_24260 Physcomitrium patens HOM05D003976 ORTHO05D004711 3.6e-285 985.3 1097 51.1
QL08p054317 Quercus lobata HOM05D003976 ORTHO05D004711 7.1e-281 971.1 744 68.8
Gorai.011G236100 Gossypium raimondii HOM05D003976 ORTHO05D004711 7.6e-275 951.0 981 56.5
Actinidia18607 Actinidia chinensis HOM05D003976 ORTHO05D004711 1.6e-264 916.8 820 63.0
Pp3c3_21120 Physcomitrium patens HOM05D003976 ORTHO05D004711 5.8e-259 898.3 1095 48.0
CiPaw.02G172200 Carya illinoinensis HOM05D003976 ORTHO05D004711 7.6e-259 897.9 632 75.0
SMO172G0221 Selaginella moellendorffii HOM05D003976 ORTHO05D004711 9.0e-252 874.4 1063 47.3
Pp3c12_15420 Physcomitrium patens HOM05D003976 ORTHO05D004711 1.6e-248 863.6 1082 46.3
Gohir.A10G202400 Gossypium hirsutum HOM05D003976 ORTHO05D004711 5.5e-225 785.4 777 58.8
Peaxi162Scf00145g01215 Petunia axillaris HOM05D003976 ORTHO05D004711 2.8e-213 746.5 515 75.1
Peaxi162Scf00145g01214 Petunia axillaris HOM05D003976 ORTHO05D004711 1.3e-210 737.6 566 69.8
COL.COLO4_34215 Corchorus olitorius HOM05D003976 ORTHO05D004711 3.5e-203 713.0 572 67.3
BraA05t22668Z Brassica rapa HOM05D003976 ORTHO05D004711 2.3e-202 710.3 566 66.3
Hund17145 Selenicereus undatus HOM05D003976 ORTHO05D004711 2.1e-192 677.2 708 54.5
vmacro00386 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 4.9e-189 666.0 842 48.3
arahy.Tifrunner.gnm1.ann1.WBL645 Arachis hypogaea HOM05D003976 ORTHO05D004711 2.4e-188 663.7 588 62.1
CBR_g30687 Chara braunii HOM05D003976 ORTHO05D004711 7.3e-185 652.1 1241 36.1
COL.COLO4_34214 Corchorus olitorius HOM05D003976 ORTHO05D004711 2.1e-184 650.6 535 67.1
AagrBONN_evm.TU.Sc2ySwM_228.4637 Anthoceros agrestis HOM05D003976 ORTHO05D004711 3.7e-181 639.8 808 46.7
BraA05t22669Z Brassica rapa HOM05D003976 ORTHO05D004711 1.3e-162 578.2 429 70.4
CAN.G321.62 Capsicum annuum HOM05D003976 ORTHO05D004711 1.7e-162 577.8 430 71.4
CiPaw.02G172100 Carya illinoinensis HOM05D003976 ORTHO05D004711 5.1e-146 523.1 376 72.6
Lalb_Chr21g0313681 Lupinus albus HOM05D003976 ORTHO05D004711 4.5e-134 483.4 349 72.5
Rhsim03G0115800 Rhododendron simsii HOM05D003976 ORTHO05D004711 1.0e-130 472.2 359 71.3
CDE10G0060 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 1.1e-127 462.2 394 61.4
vmacro00383 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 5.0e-125 453.4 367 68.1
Cpa.g.sc53.132 Carica papaya HOM05D003976 ORTHO05D004711 5.0e-117 426.8 321 71.7
Lalb_Chr21g0313551 Lupinus albus HOM05D003976 ORTHO05D004711 6.1e-107 393.3 279 73.8
Cpa.g.sc53.134 Carica papaya HOM05D003976 ORTHO05D004711 6.7e-106 389.8 348 61.8
QL08p054329 Quercus lobata HOM05D003976 ORTHO05D004711 5.7e-105 386.7 271 77.1
Cc02_g10920 Coffea canephora HOM05D003976 ORTHO05D004711 5.5e-92 343.6 228 78.1
CDE10G0443 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 1.2e-91 342.4 371 52.8
BcaNung07314 Brassica carinata HOM05D003976 ORTHO05D004711 3.6e-75 287.7 178 78.1
VMungo0720G2709 Vigna mungo HOM05D003976 ORTHO05D004711 6.8e-66 256.9 175 76.0
HPP92_026132 Vanilla planifolia HOM05D003976 ORTHO05D004711 6.8e-58 230.3 142 78.9
CDE10G0301 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 7.6e-57 226.9 162 69.8
ATR0730G060 Amborella trichopoda HOM05D003976 ORTHO05D004711 1.7e-56 225.7 139 80.6
PSO478G0690 Papaver somniferum HOM05D003976 ORTHO05D004711 6.6e-53 213.8 129 84.5
SEGI_25267 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 6.4e-48 197.2 139 69.8
vmacro00384 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 7.1e-47 193.7 108 85.2
TPR.G33031 Trifolium pratense HOM05D003976 ORTHO05D004711 1.3e-37 162.9 126 65.9
CAN.G796.1 Capsicum annuum HOM05D003976 ORTHO05D004711 1.9e-36 159.1 181 51.4
Actinidia18608 Actinidia chinensis HOM05D003976 ORTHO05D004711 2.8e-35 155.2 85 85.9
AL491U10010 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 6.9e-34 150.6 102 71.6
Cc02_g10910 Coffea canephora HOM05D003976 ORTHO05D004711 3.8e-32 144.8 111 70.3
vmacro00385 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 1.4e-31 142.9 96 75.0
Lsat_1_v5_gn_4_4660 Lactuca sativa HOM05D003976 ORTHO05D004711 2.5e-31 142.1 169 49.1
Psat7g009440 Pisum sativum HOM05D003976 ORTHO05D004711 1.3e-29 136.3 86 73.3
Gohir.D10G210566 Gossypium hirsutum HOM05D003976 ORTHO05D004711 3.0e-29 135.2 87 72.4
Lsat_1_v5_gn_9_29220 Lactuca sativa HOM05D003976 ORTHO05D006024 6.7e-29 134.0 86 74.4
SHI08886 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-28 132.1 92 73.9
Cre01.g003050 Chlamydomonas reinhardtii HOM05D003976 ORTHO05D004711 9.6e-28 130.2 203 34.5
Hma1.2p1_0384F.1_g140740 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 3.1e-26 125.2 87 78.2
SHI08885 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-26 124.8 79 73.4
TPR.G28835 Trifolium pratense HOM05D003976 ORTHO05D004711 2.6e-25 122.1 79 69.6
Lj6g0023100 Lotus japonicus HOM05D003976 ORTHO05D004711 1.7e-24 119.4 104 57.7
Cc06_g17220 Coffea canephora HOM05D003976 ORTHO05D004711 1.3e-21 109.8 81 65.4
Prupe.5G231200 Prunus persica HOM05D003976 ORTHO05D004711 6.3e-19 100.9 100 57.0
vmacro16680 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 2.9e-16 92.0 62 74.2
vmacro23142 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 2.9e-16 92.0 62 74.2
Hma1.2p1_0384F.1_g140760 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 4.2e-15 88.2 49 87.8
Lsat_1_v5_gn_6_63420 Lactuca sativa HOM05D003976 ORTHO05D004711 7.2e-15 87.4 71 62.0
Cc03_g09730 Coffea canephora HOM05D003976 ORTHO05D004711 1.8e-10 72.8 56 66.1
HanXRQChr05g0134171 Helianthus annuus HOM05D003976 ORTHO05D004711 3.1e-10 72.0 52 71.2
Aa31LG6G7350 Aethionema arabicum HOM05D003976 ORTHO05D004711 5.3e-10 71.2 53 69.8
TPR.G6473 Trifolium pratense HOM05D003976 ORTHO05D004711 1.5e-09 69.7 48 70.8
Lalb_Chr21g0313561 Lupinus albus HOM05D003976 ORTHO05D004711 7.7e-09 67.4 84 48.8
Lalb_Chr21g0313691 Lupinus albus HOM05D003976 ORTHO05D004711 7.7e-09 67.4 84 48.8
MBI18_g27470_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 5.0e-08 64.7 49 59.2


User provided reference genes

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