Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 7.5e-77 290.4 144 100.0
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 1.5e-53 213.0 122 86.1
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 2.6e-53 212.2 122 86.1
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 1.6e-50 203.0 123 81.3
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 1.7e-49 199.5 123 77.2
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 2.3e-49 199.1 152 69.7
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.1e-48 196.8 121 77.7
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.1e-48 196.8 121 77.7
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 1.1e-48 196.8 121 77.7
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 4.3e-48 194.9 122 77.0
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 5.6e-48 194.5 125 75.2
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 2.1e-47 192.6 129 75.2
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 3.6e-47 191.8 122 77.9
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 4.7e-47 191.4 120 75.8
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 8.0e-47 190.7 111 82.9
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 1.1e-46 190.3 123 75.6
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 2.3e-46 189.1 127 74.8
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 2.3e-46 189.1 136 72.8
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 4.0e-46 188.3 128 68.8
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 4.0e-46 188.3 124 71.8
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 4.0e-46 188.3 125 76.0
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 5.2e-46 188.0 123 74.0
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 6.8e-46 187.6 128 68.0
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.5e-45 186.4 112 77.7
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 2.6e-45 185.7 122 72.1
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 3.4e-45 185.3 136 69.9
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 4.4e-45 184.9 121 71.9
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 5.8e-45 184.5 125 74.4
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 5.8e-45 184.5 124 75.0
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 5.8e-45 184.5 124 75.0
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 7.5e-45 184.1 117 76.1
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 9.8e-45 183.7 111 79.3
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.7e-44 183.0 120 75.8
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 2.2e-44 182.6 128 71.1
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 2.2e-44 182.6 118 75.4
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 3.7e-44 181.8 120 75.8
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 3.7e-44 181.8 105 81.0
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 4.9e-44 181.4 124 73.4
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 6.4e-44 181.0 127 72.4
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 6.4e-44 181.0 120 75.8
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 6.4e-44 181.0 108 79.6
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 8.3e-44 180.6 120 73.3
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 8.3e-44 180.6 121 73.6
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 8.3e-44 180.6 122 73.0
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.1e-43 180.3 124 73.4
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 1.4e-43 179.9 118 74.6
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 3.2e-43 178.7 110 80.0
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 3.2e-43 178.7 124 71.8
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 4.1e-43 178.3 122 72.1
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 4.1e-43 178.3 106 80.2
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 4.1e-43 178.3 103 82.5
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 5.4e-43 177.9 123 72.4
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 7.0e-43 177.6 118 69.5
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 9.2e-43 177.2 124 71.0
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 9.2e-43 177.2 121 73.6
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 9.2e-43 177.2 128 65.6
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 1.2e-42 176.8 106 79.2
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 1.2e-42 176.8 103 80.6
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 1.2e-42 176.8 103 82.5
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 1.2e-42 176.8 103 81.6
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 3.5e-42 175.3 128 69.5
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 4.6e-42 174.9 119 73.1
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 4.6e-42 174.9 120 75.0
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 4.6e-42 174.9 118 72.9
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 6.0e-42 174.5 139 64.0
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 7.8e-42 174.1 123 69.1
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 7.8e-42 174.1 139 64.0
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 7.8e-42 174.1 123 68.3
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 7.8e-42 174.1 109 73.4
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 1.0e-41 173.7 126 67.5
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 1.0e-41 173.7 101 81.2
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 1.3e-41 173.3 122 69.7
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 1.3e-41 173.3 121 71.9
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 1.7e-41 172.9 121 71.9
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 1.7e-41 172.9 121 71.9
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 1.7e-41 172.9 121 71.9
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 1.7e-41 172.9 112 73.2
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 1.7e-41 172.9 132 63.6
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 2.3e-41 172.6 125 71.2
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 2.3e-41 172.6 123 70.7
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 3.0e-41 172.2 124 70.2
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 5.0e-41 171.4 125 69.6
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 1.1e-40 170.2 125 71.2
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 1.9e-40 169.5 111 72.1
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 2.5e-40 169.1 128 69.5
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 7.3e-40 167.5 108 76.9
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 1.6e-39 166.4 199 49.7
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 6.2e-39 164.5 117 70.9
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 1.1e-38 163.7 152 57.9
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 2.3e-38 162.5 117 70.1
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 5.2e-38 161.4 100 75.0
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 6.8e-38 161.0 141 59.6
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 8.9e-38 160.6 131 61.1
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 2.6e-37 159.1 157 54.1
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 2.6e-37 159.1 106 70.8
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 3.4e-37 158.7 160 53.1
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 4.4e-37 158.3 117 63.2
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 9.9e-37 157.1 107 72.0
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 9.9e-37 157.1 110 70.9
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 3.2e-35 152.1 162 52.5
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 1.0e-33 147.1 100 72.0
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 8.6e-33 144.1 95 73.7
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 1.9e-32 142.9 84 83.3
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 2.5e-32 142.5 96 74.0
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 5.6e-32 141.4 102 69.6
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 5.2e-30 134.8 124 60.5
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 3.8e-28 128.6 112 61.6
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 1.1e-27 127.1 85 75.3
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 1.9e-27 126.3 84 75.0
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 9.2e-27 124.0 65 92.3
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 1.7e-25 119.8 104 55.8
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 6.6e-25 117.9 119 55.5
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 1.5e-24 116.7 71 77.5
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 8.1e-23 110.9 65 80.0
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 3.1e-22 109.0 64 79.7
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 2.4e-19 99.4 99 57.6
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 2.7e-18 95.9 97 50.5
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 4.6e-18 95.1 101 46.5
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 4.6e-18 95.1 65 72.3
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.9e-16 89.7 96 53.1
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 5.6e-16 88.2 99 42.4
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 4.8e-15 85.1 103 40.8
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 8.1e-15 84.3 57 71.9
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 1.5e-13 80.1 90 38.9
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 2.2e-12 76.3 57 66.7
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 5.3e-06 55.1 65 49.2


User provided reference genes

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