Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.27450 Avicennia marina HOM05D003984 ORTHO05D004740 3.7e-146 521.5 267 100.0
SGA_v2.0_scaffold62G21447 Striga asiatica HOM05D003984 ORTHO05D004740 1.0e-132 476.9 261 92.0
Oeu055063.1 Olea europaea HOM05D003984 ORTHO05D004740 3.4e-131 471.9 267 88.4
Nitab4.5_0000830g0100 Nicotiana tabacum HOM05D003984 ORTHO05D004740 3.1e-129 465.3 264 87.9
QL08p057270 Quercus lobata HOM05D003984 ORTHO05D004740 3.1e-129 465.3 266 87.2
Dinv11820 Davidia involucrata HOM05D003984 ORTHO05D004740 1.2e-128 463.4 267 86.5
Migut.F02015 Erythranthe guttata HOM05D003984 ORTHO05D004740 1.2e-128 463.4 261 89.3
Nitab4.5_0001248g0030 Nicotiana tabacum HOM05D003984 ORTHO05D004740 2.7e-128 462.2 264 87.5
CiPaw.01G278000 Carya illinoinensis HOM05D003984 ORTHO05D004740 5.9e-128 461.1 267 85.0
CANSAT56G1305 Cannabis sativa HOM05D003984 ORTHO05D004740 2.2e-127 459.1 267 85.0
Peaxi162Scf01024g00120 Petunia axillaris HOM05D003984 ORTHO05D004740 1.1e-126 456.8 264 87.9
Solyc04g049710.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 1.1e-126 456.8 262 87.8
Sopen04g019960 Solanum pennellii HOM05D003984 ORTHO05D004740 1.5e-126 456.4 262 87.8
CiPaw.02G177500 Carya illinoinensis HOM05D003984 ORTHO05D004740 1.9e-126 456.1 268 86.2
Dinv31376 Davidia involucrata HOM05D003984 ORTHO05D004740 1.9e-126 456.1 267 85.0
Atru.chr12.610 Acer truncatum HOM05D003984 ORTHO05D004740 2.5e-126 455.7 267 85.4
Cc09_g02350 Coffea canephora HOM05D003984 ORTHO05D004740 3.2e-126 455.3 267 85.8
MD01G1114200 Malus domestica HOM05D003984 ORTHO05D004740 3.2e-126 455.3 267 85.0
COL.COLO4_23777 Corchorus olitorius HOM05D003984 ORTHO05D004740 4.2e-126 454.9 267 85.0
MD07G1182100 Malus domestica HOM05D003984 ORTHO05D004740 4.2e-126 454.9 267 85.0
Manes.10G040500 Manihot esculenta HOM05D003984 ORTHO05D004740 4.2e-126 454.9 267 85.8
Prupe.2G220800 Prunus persica HOM05D003984 ORTHO05D004740 7.2e-126 454.1 267 85.0
Cfa001574 Carpinus fangiana HOM05D003984 ORTHO05D004740 1.2e-125 453.4 267 85.0
RcHm_v2.0_Chr1g0364411 Rosa chinensis HOM05D003984 ORTHO05D004740 1.2e-125 453.4 267 85.0
CSS0025505 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.6e-125 453.0 267 83.9
Duzib114G0791 Durio zibethinus HOM05D003984 ORTHO05D004740 2.1e-125 452.6 267 85.8
CSS0011111 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.4e-124 449.9 267 85.0
CSS0036351 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.4e-124 449.9 267 83.5
Thecc.10G065000 Theobroma cacao HOM05D003984 ORTHO05D004740 5.2e-124 448.0 267 83.9
SGA_v2.0_scaffold329G48849 Striga asiatica HOM05D003984 ORTHO05D004740 1.2e-123 446.8 261 87.7
Manes.07G104700 Manihot esculenta HOM05D003984 ORTHO05D004740 1.3e-122 443.4 267 84.3
GSVIVG01032647001 Vitis vinifera HOM05D003984 ORTHO05D004740 1.3e-122 443.4 267 83.9
Peaxi162Scf00195g00824 Petunia axillaris HOM05D003984 ORTHO05D004740 3.7e-122 441.8 264 84.1
Potri.010G215500 Populus trichocarpa HOM05D003984 ORTHO05D004740 6.3e-122 441.0 269 83.6
Potri.008G046000 Populus trichocarpa HOM05D003984 ORTHO05D004740 1.1e-121 440.3 267 83.5
Actinidia13840 Actinidia chinensis HOM05D003984 ORTHO05D004740 7.0e-121 437.6 268 82.1
Lj8A94T49 Lonicera japonica HOM05D003984 ORTHO05D004740 9.1e-121 437.2 268 82.8
FAN10G1795 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.2e-120 436.8 267 83.1
CsaV3_5G026080 Cucumis sativus L. HOM05D003984 ORTHO05D004740 2.0e-120 436.0 267 81.6
Medtr1g116240 Medicago truncatula HOM05D003984 ORTHO05D004740 2.0e-120 436.0 267 81.6
Ciclev10032445m.g Citrus clementina HOM05D003984 ORTHO05D004740 2.7e-120 435.6 268 82.5
FAN06G2832 Fragaria x ananassa HOM05D003984 ORTHO05D004740 2.7e-120 435.6 267 82.8
Nitab4.5_0000691g0240 Nicotiana tabacum HOM05D003984 ORTHO05D004740 4.5e-120 434.9 262 84.0
AUR62036011 Chenopodium quinoa HOM05D003984 ORTHO05D004740 5.9e-120 434.5 267 83.9
ClCG09G020350 Citrullus lanatus HOM05D003984 ORTHO05D004740 5.9e-120 434.5 267 81.3
Lj5g0020432 Lotus japonicus HOM05D003984 ORTHO05D004740 5.9e-120 434.5 264 82.6
FAN03G0045 Fragaria x ananassa HOM05D003984 ORTHO05D004740 7.7e-120 434.1 267 82.0
FvH4_7g20520 Fragaria vesca HOM05D003984 ORTHO05D004740 1.3e-119 433.3 267 82.0
TWI15G0393 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 1.7e-119 433.0 265 83.4
Duzib128G0096 Durio zibethinus HOM05D003984 ORTHO05D004740 2.9e-119 432.2 268 83.6
Oeu057248.1 Olea europaea HOM05D003984 ORTHO05D004740 2.9e-119 432.2 254 84.3
EL10Ac2g03538 Beta vulgaris HOM05D003984 ORTHO05D004740 1.5e-118 429.9 268 83.6
PGR044G2197 Punica granatum HOM05D003984 ORTHO05D004740 1.5e-118 429.9 259 85.3
Nitab4.5_0004104g0120 Nicotiana tabacum HOM05D003984 ORTHO05D004740 4.2e-118 428.3 250 86.0
Sabra08G0032300 Salix brachista HOM05D003984 ORTHO05D004740 4.2e-118 428.3 275 80.4
PGSC0003DMG400032551 Solanum tuberosum HOM05D003984 ORTHO05D004740 5.5e-118 427.9 264 81.8
CSS0002243 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 7.2e-118 427.6 255 85.9
Lalb_Chr21g0307521 Lupinus albus HOM05D003984 ORTHO05D004740 7.2e-118 427.6 274 79.6
Sed0003028 Sechium edule HOM05D003984 ORTHO05D004740 7.2e-118 427.6 267 79.4
TPR.G10390 Trifolium pratense HOM05D003984 ORTHO05D004740 1.2e-117 426.8 268 80.6
CAN.G186.31 Capsicum annuum HOM05D003984 ORTHO05D004740 1.6e-117 426.4 264 81.1
TAR633G2252 Trochodendron aralioides HOM05D003984 ORTHO05D004740 1.6e-117 426.4 259 81.1
Rhsim09G0154900 Rhododendron simsii HOM05D003984 ORTHO05D004740 2.8e-117 425.6 250 85.2
Eucgr.J01137 Eucalyptus grandis HOM05D003984 ORTHO05D004740 4.7e-117 424.9 267 82.8
Glyma.10G294300 Glycine max HOM05D003984 ORTHO05D004740 6.1e-117 424.5 267 80.1
Gorai.012G092700 Gossypium raimondii HOM05D003984 ORTHO05D004740 8.0e-117 424.1 267 80.1
Solyc04g009550.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 1.0e-116 423.7 264 81.1
Hund22456 Selenicereus undatus HOM05D003984 ORTHO05D004740 1.8e-116 422.9 268 81.3
Migut.F01787 Erythranthe guttata HOM05D003984 ORTHO05D004740 3.0e-116 422.2 262 81.7
Nn2g10608 Nelumbo nucifera HOM05D003984 ORTHO05D004740 5.2e-116 421.4 269 78.1
Psat6g240040 Pisum sativum HOM05D003984 ORTHO05D004740 5.2e-116 421.4 265 80.0
Lalb_Chr06g0164371 Lupinus albus HOM05D003984 ORTHO05D004740 6.8e-116 421.0 267 79.8
VMungo0720G0811 Vigna mungo HOM05D003984 ORTHO05D004740 8.9e-116 420.6 266 80.5
Gohir.A05G343700 Gossypium hirsutum HOM05D003984 ORTHO05D004740 2.6e-115 419.1 267 79.4
Glyma.20G244200 Glycine max HOM05D003984 ORTHO05D004740 5.7e-115 417.9 267 79.8
Gohir.D10G216200 Gossypium hirsutum HOM05D003984 ORTHO05D004740 9.8e-115 417.2 267 79.0
AUR62041612 Chenopodium quinoa HOM05D003984 ORTHO05D004740 1.3e-114 416.8 294 75.5
DCAR_019150 Daucus carota HOM05D003984 ORTHO05D004740 1.3e-114 416.8 267 78.7
Gorai.011G241800 Gossypium raimondii HOM05D003984 ORTHO05D004740 2.2e-114 416.0 267 78.7
TWI63G0288 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 2.2e-114 416.0 257 83.7
Lalb_Chr02g0144171 Lupinus albus HOM05D003984 ORTHO05D004740 4.9e-114 414.8 270 78.1
Ah.10g033080 Amaranthus hybridus HOM05D003984 ORTHO05D004740 6.3e-114 414.5 291 75.6
HanXRQChr12g0367731 Helianthus annuus HOM05D003984 ORTHO05D004740 6.3e-114 414.5 267 77.5
arahy.Tifrunner.gnm1.ann1.V3HSKN Arachis hypogaea HOM05D003984 ORTHO05D004740 1.1e-113 413.7 267 79.0
Phvul.007G005800 Phaseolus vulgaris HOM05D003984 ORTHO05D004740 1.1e-113 413.7 268 79.1
Gohir.A10G208060 Gossypium hirsutum HOM05D003984 ORTHO05D004740 7.0e-113 411.0 267 78.7
DCAR_015251 Daucus carota HOM05D003984 ORTHO05D004740 1.6e-112 409.8 250 82.4
Nn2g12956 Nelumbo nucifera HOM05D003984 ORTHO05D004740 4.6e-112 408.3 268 76.5
SalBow3G2899 Salvia bowleyana HOM05D003984 ORTHO05D004740 5.9e-112 407.9 256 82.0
Lj1A928T58 Lonicera japonica HOM05D003984 ORTHO05D004740 7.8e-112 407.5 308 70.8
TAR623G0696 Trochodendron aralioides HOM05D003984 ORTHO05D004740 2.9e-111 405.6 251 80.1
Haze_16954 Corylus avellana HOM05D003984 ORTHO05D004740 1.5e-110 403.3 238 83.6
PSO384G2137 Papaver somniferum HOM05D003984 ORTHO05D004740 2.5e-110 402.5 267 77.2
Sabra10G0166500 Salix brachista HOM05D003984 ORTHO05D004740 1.2e-109 400.2 284 74.6
PSO339G0239 Papaver somniferum HOM05D003984 ORTHO05D004740 1.6e-109 399.8 267 76.8
THA.LOC104825886 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 2.1e-109 399.4 264 76.9
Sed0000226 Sechium edule HOM05D003984 ORTHO05D004740 1.4e-108 396.7 265 75.5
ECA238G2056 Erigeron canadensis HOM05D003984 ORTHO05D004740 1.8e-108 396.4 267 76.8
ATR0594G132 Amborella trichopoda HOM05D003984 ORTHO05D004740 1.7e-106 389.8 270 74.4
THA.LOC104824242 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 4.9e-106 388.3 263 76.0
arahy.Tifrunner.gnm1.ann1.B234YK Arachis hypogaea HOM05D003984 ORTHO05D004740 1.1e-105 387.1 320 65.6
Aqoxy4G03159 Aquilegia oxysepala HOM05D003984 ORTHO05D004740 1.9e-105 386.3 280 72.5
CDE09G0608 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 9.2e-105 384.0 268 71.6
PSO339G2647 Papaver somniferum HOM05D003984 ORTHO05D004740 1.6e-104 383.3 269 74.0
THA.LOC104810167 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 1.7e-103 379.8 250 76.8
HanXRQChr07g0200921 Helianthus annuus HOM05D003984 ORTHO05D004740 3.9e-103 378.6 255 75.7
Lsat_1_v5_gn_2_115481 Lactuca sativa HOM05D003984 ORTHO05D004740 1.2e-101 373.6 252 77.0
Lsat_1_v5_gn_8_21240 Lactuca sativa HOM05D003984 ORTHO05D004740 6.2e-101 371.3 268 71.3
Ca_11380_v3 Cicer arietinum L. HOM05D003984 ORTHO05D004740 8.9e-100 367.5 275 70.9
unitig_0.g190 Utricularia gibba HOM05D003984 ORTHO05D004740 1.2e-99 367.1 235 80.0
HPP92_019786 Vanilla planifolia HOM05D003984 ORTHO05D004740 1.5e-99 366.7 265 70.6
Os11g0102600 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 3.4e-99 365.5 257 72.0
Os12g0102200 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 3.4e-99 365.5 257 72.0
Lj1C926T5 Lonicera japonica HOM05D003984 ORTHO05D004740 9.8e-99 364.0 247 76.1
Aa31sc33G70 Aethionema arabicum HOM05D003984 ORTHO05D004740 2.2e-98 362.8 265 71.3
AL5G36110 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 6.4e-98 361.3 262 70.6
HanXRQChr14g0460861 Helianthus annuus HOM05D003984 ORTHO05D004740 6.4e-98 361.3 267 73.0
AT3G55000 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 1.9e-97 359.8 262 71.0
Carub.0005s2162 Capsella rubella HOM05D003984 ORTHO05D004740 9.2e-97 357.5 262 70.6
HPP92_017944 Vanilla planifolia HOM05D003984 ORTHO05D004740 2.1e-96 356.3 266 69.5
MSTRG.9196 Avicennia marina HOM05D003984 ORTHO05D004740 3.5e-96 355.5 199 90.5
Gohir.D04G082100 Gossypium hirsutum HOM05D003984 ORTHO05D004740 4.6e-96 355.1 227 79.3
Zm00001eb094350 Zea mays HOM05D003984 ORTHO05D004740 4.6e-96 355.1 257 71.2
Thhalv10010647m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 1.0e-95 354.0 262 70.2
CDE02G0952 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 6.6e-95 351.3 253 70.0
Sp5g07420 Schrenkiella parvula HOM05D003984 ORTHO05D004740 8.6e-95 350.9 263 70.0
AL5G36120 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 1.9e-94 349.7 262 68.7
AT3G55005 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 9.5e-94 347.4 259 69.1
A07p22390 Brassica napus HOM05D003984 ORTHO05D004740 9.5e-94 347.4 262 69.1
BcaB02g07705 Brassica carinata HOM05D003984 ORTHO05D004740 1.6e-93 346.7 262 68.7
Zm00001eb163130 Zea mays HOM05D003984 ORTHO05D004740 2.1e-93 346.3 257 70.4
BcaC08g44716 Brassica carinata HOM05D003984 ORTHO05D004740 2.8e-93 345.9 262 67.9
C06p22550 Brassica napus HOM05D003984 ORTHO05D004740 2.8e-93 345.9 262 67.9
BolC6t37445H Brassica oleracea HOM05D003984 ORTHO05D004740 6.2e-93 344.7 262 68.3
Carub.0005s2163 Capsella rubella HOM05D003984 ORTHO05D004740 2.3e-92 342.8 262 68.3
CARHR165000 Cardamine hirsuta HOM05D003984 ORTHO05D004740 4.0e-92 342.0 262 69.5
BraA07t29915Z Brassica rapa HOM05D003984 ORTHO05D004740 5.8e-91 338.2 281 65.1
Sp5g07430 Schrenkiella parvula HOM05D003984 ORTHO05D004740 5.8e-91 338.2 262 69.5
Sc20g0002240 Simmondsia chinensis HOM05D003984 ORTHO05D004740 5.8e-91 338.2 259 68.0
CARHR165010 Cardamine hirsuta HOM05D003984 ORTHO05D004740 3.5e-88 328.9 260 66.2
MELO3C025490.2 Cucumis melo HOM05D003984 ORTHO05D004740 2.3e-87 326.2 206 80.1
Sopen04g004710 Solanum pennellii HOM05D003984 ORTHO05D004740 2.5e-86 322.8 198 82.8
BraA09t40255Z Brassica rapa HOM05D003984 ORTHO05D004740 6.2e-85 318.2 264 62.9
C08p30240 Brassica napus HOM05D003984 ORTHO05D004740 8.1e-85 317.8 266 63.5
A09p48020 Brassica napus HOM05D003984 ORTHO05D004740 4.9e-82 308.5 259 62.9
BcaNung04652 Brassica carinata HOM05D003984 ORTHO05D004740 6.4e-82 308.1 266 62.0
BcaB01g00136 Brassica carinata HOM05D003984 ORTHO05D004740 2.3e-79 299.7 263 61.2
BolC8t50631H Brassica oleracea HOM05D003984 ORTHO05D004740 2.3e-79 299.7 262 60.7
Thhalv10010676m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 1.1e-78 297.4 241 66.8
Sc20g0002230 Simmondsia chinensis HOM05D003984 ORTHO05D004740 3.4e-75 285.8 191 76.4
FAN01G2342 Fragaria x ananassa HOM05D003984 ORTHO05D004740 8.7e-71 271.2 144 91.0
FAN06G1180 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.8e-68 263.5 174 77.0
AagrBONN_evm.TU.Sc2ySwM_344.1695 Anthoceros agrestis HOM05D003984 ORTHO05D004740 2.2e-42 176.8 213 50.2
Pp3c14_5580 Physcomitrium patens HOM05D003984 ORTHO05D004740 2.1e-40 170.2 277 41.5
Actinidia29191 Actinidia chinensis HOM05D003984 ORTHO05D004740 2.0e-38 163.7 121 70.2
SEGI_35779 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 2.5e-38 163.3 241 43.6
Mapoly0066s0078 Marchantia polymorpha HOM05D003984 ORTHO05D004740 6.3e-37 158.7 253 41.5
Cpa.g.sc1.281 Carica papaya HOM05D003984 ORTHO05D004740 2.6e-35 153.3 107 72.0
TAR624G0784 Trochodendron aralioides HOM05D003984 ORTHO05D004740 3.3e-30 136.3 93 73.1
FAN06G2469 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.3e-29 134.4 74 91.9
CBR_g37750 Chara braunii HOM05D000019 ORTHO05D000002 3.8e-26 122.9 233 39.5
SEGI_13922 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 1.1e-25 121.3 76 80.3
SMO356G0399 Selaginella moellendorffii HOM05D003984 ORTHO05D004740 2.9e-18 96.7 164 39.6
AUR62035988 Chenopodium quinoa HOM05D003984 ORTHO05D004740 6.1e-16 89.0 92 53.3
CBR_g10977 Chara braunii HOM05D003984 ORTHO05D004740 5.2e-15 85.9 191 33.5
CSS0046661 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 3.1e-12 76.6 40 87.5
SHI42769 Sapria himalayana HOM05D003984 ORTHO05D004740 5.4e-12 75.9 118 44.1
Nn6g33815 Nelumbo nucifera HOM05D003984 ORTHO05D004740 5.9e-11 72.4 40 80.0
RcHm_v2.0_Chr2g0140211 Rosa chinensis HOM05D003984 ORTHO05D004740 1.0e-10 71.6 43 72.1
HanXRQChr17g0557371 Helianthus annuus HOM05D000549 ORTHO05D004740 1.7e-10 70.9 143 35.7
PRCOL_00000040 Prasinoderma coloniale HOM05D003984 ORTHO05D004740 8.0e-08 62.0 136 33.1
MCO05G642 Micromonas commoda HOM05D003984 ORTHO05D004740 1.0e-07 61.6 105 32.4
BraA09t38747Z Brassica rapa HOM05D003984 ORTHO05D033849 7.5e-06 55.5 62 50.0
Sabra18G0026300 Salix brachista HOM05D002732 ORTHO05D002955 7.5e-06 55.5 32 84.4


User provided reference genes

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