Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 1.0e-171 606.7 319 100.0
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 2.7e-119 432.6 309 74.8
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 2.4e-112 409.5 305 70.8
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 1.2e-106 390.6 335 64.2
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 3.8e-105 385.6 343 64.4
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 2.8e-100 369.4 308 67.2
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 1.2e-98 364.0 272 70.6
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 1.0e-97 360.9 303 67.7
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 1.7e-97 360.1 316 65.5
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 4.9e-97 358.6 265 72.5
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 2.5e-96 356.3 316 65.5
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 4.2e-96 355.5 263 73.0
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 5.5e-96 355.1 316 65.5
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 5.5e-96 355.1 267 71.2
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 1.2e-95 354.0 316 65.2
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 6.0e-95 351.7 314 65.3
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.0e-94 350.9 316 64.6
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 1.0e-94 350.9 314 64.3
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 2.3e-94 349.7 255 71.0
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 3.9e-94 349.0 302 65.9
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 1.1e-93 347.4 338 61.5
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 1.9e-93 346.7 281 68.7
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 1.9e-93 346.7 257 70.4
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 4.3e-93 345.5 304 63.8
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 7.4e-93 344.7 304 63.8
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 7.4e-93 344.7 308 63.3
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 2.1e-92 343.2 255 71.4
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 1.4e-91 340.5 303 64.7
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 1.8e-91 340.1 322 62.1
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 1.8e-91 340.1 323 60.1
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 2.4e-91 339.7 313 62.3
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 5.3e-91 338.6 301 65.8
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 9.0e-91 337.8 268 69.0
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 2.0e-90 336.7 305 63.9
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 3.4e-90 335.9 317 61.2
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 1.4e-88 330.5 268 65.7
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 5.5e-88 328.6 258 67.4
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 2.1e-87 326.6 276 64.9
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 2.7e-87 326.2 257 68.9
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 4.6e-87 325.5 305 63.9
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 6.1e-87 325.1 309 58.9
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 6.1e-87 325.1 261 67.4
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 7.9e-87 324.7 309 58.9
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 1.3e-86 323.9 300 59.7
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 1.8e-86 323.6 304 62.2
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 2.3e-86 323.2 274 65.3
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 2.3e-86 323.2 258 69.0
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 3.9e-86 322.4 307 60.6
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 5.1e-86 322.0 296 61.1
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 5.1e-86 322.0 296 61.1
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 5.1e-86 322.0 305 62.3
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 5.1e-86 322.0 307 60.9
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 8.7e-86 321.2 299 60.2
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 8.7e-86 321.2 271 64.2
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 1.1e-85 320.9 287 62.7
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 1.5e-85 320.5 265 65.3
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 1.9e-85 320.1 299 61.2
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 2.5e-85 319.7 299 59.9
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 4.3e-85 318.9 301 59.8
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 4.3e-85 318.9 306 60.5
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 7.4e-85 318.2 271 66.4
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 9.7e-85 317.8 309 56.0
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 1.3e-84 317.4 307 60.9
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 1.6e-84 317.0 317 58.4
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 4.8e-84 315.5 325 56.0
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 8.2e-84 314.7 313 57.8
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 8.2e-84 314.7 270 63.7
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 3.1e-83 312.8 307 57.7
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 4.5e-82 308.9 232 69.8
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 8.5e-81 304.7 283 61.1
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 1.1e-80 304.3 211 76.3
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 9.4e-80 301.2 257 64.2
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 1.2e-79 300.8 274 62.8
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 8.8e-78 294.7 277 60.6
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 1.1e-77 294.3 306 54.9
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 2.5e-77 293.1 226 69.0
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 7.4e-77 291.6 257 63.0
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.2e-76 290.0 313 55.9
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.8e-76 289.7 313 56.2
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 4.8e-76 288.9 284 59.2
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 6.3e-76 288.5 314 55.1
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 3.1e-75 286.2 256 61.3
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 2.6e-74 283.1 224 69.6
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 7.7e-74 281.6 305 57.4
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 5.0e-73 278.9 268 60.4
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 1.4e-72 277.3 306 56.9
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 7.9e-71 271.6 228 65.4
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 1.4e-70 270.8 253 58.1
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 4.4e-69 265.8 276 52.9
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 2.2e-68 263.5 287 58.2
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 2.8e-68 263.1 200 71.5
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 4.8e-68 262.3 318 50.6
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 2.2e-65 253.4 233 63.1
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 1.3e-60 237.7 188 70.2
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.1e-56 224.6 222 60.4
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 2.5e-56 223.4 324 46.9
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 3.7e-52 209.5 151 74.8
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 4.1e-51 206.1 235 47.2
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 5.0e-49 199.1 250 45.2
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 2.4e-43 180.3 236 43.6
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 2.9e-41 173.3 156 64.7
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 5.0e-41 172.6 135 68.1
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 1.4e-38 164.5 120 75.0
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 1.4e-38 164.5 183 55.7
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 1.1e-35 154.8 252 39.7
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.0e-34 150.6 114 68.4
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 2.7e-34 150.2 182 47.8
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 4.6e-34 149.4 120 66.7
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 1.5e-32 144.4 112 64.3
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 7.3e-32 142.1 121 63.6
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 5.2e-30 136.0 159 56.0
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 5.8e-29 132.5 212 44.8
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 1.2e-26 124.8 120 56.7
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 3.9e-25 119.8 226 38.9
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 5.8e-21 105.9 110 57.3
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 9.8e-21 105.1 70 72.9
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 4.0e-14 83.2 107 51.4
FAN14G1321 Fragaria x ananassa HOM05D000780 ORTHO05D009033 3.2e-11 73.6 115 45.2
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 1.1e-08 65.1 50 60.0
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 4.0e-06 56.6 55 54.5


User provided reference genes

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