Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 2.4e-167 592.0 285 100.0
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 9.1e-127 457.2 285 77.2
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 9.4e-124 447.2 285 74.7
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 2.0e-121 439.5 284 73.6
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 2.6e-121 439.1 281 75.1
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 6.3e-120 434.5 307 69.4
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 3.8e-109 398.7 272 66.5
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 6.1e-107 391.3 278 64.4
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 8.0e-107 391.0 277 62.1
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 5.8e-105 384.8 276 66.3
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 2.2e-104 382.9 269 65.4
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 1.1e-103 380.6 272 64.7
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 3.2e-103 379.0 271 66.1
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 5.4e-103 378.3 272 64.7
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 1.3e-101 373.6 273 62.6
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 1.3e-101 373.6 273 64.1
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 3.0e-101 372.5 258 66.3
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 3.6e-99 365.5 273 62.6
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 4.7e-99 365.2 279 61.3
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 1.1e-98 364.0 270 61.9
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 2.3e-98 362.8 273 60.1
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 2.6e-97 359.4 273 60.4
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 3.4e-97 359.0 265 60.4
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 7.5e-97 357.8 275 60.4
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 1.3e-96 357.1 275 60.7
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 2.9e-96 355.9 268 61.9
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 3.7e-96 355.5 267 62.2
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 3.7e-96 355.5 303 57.8
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 6.4e-96 354.8 252 64.7
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 6.4e-96 354.8 276 59.1
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 8.3e-96 354.4 278 57.2
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 1.1e-95 354.0 268 64.6
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 9.2e-95 350.9 272 59.2
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 9.2e-95 350.9 270 60.7
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 6.0e-94 348.2 257 61.5
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 1.3e-93 347.1 273 57.9
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 1.7e-93 346.7 274 58.8
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 1.7e-93 346.7 282 57.1
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 3.0e-93 345.9 287 60.6
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 3.9e-93 345.5 273 58.6
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 5.0e-93 345.1 267 61.8
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 5.0e-93 345.1 270 58.1
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 1.5e-92 343.6 273 57.9
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 1.9e-92 343.2 270 57.8
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.9e-92 343.2 278 61.2
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 4.3e-92 342.0 311 54.3
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 5.6e-92 341.7 278 59.4
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 1.6e-91 340.1 330 50.9
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 2.1e-91 339.7 311 54.0
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 4.7e-91 338.6 271 56.8
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 1.2e-89 334.0 262 58.8
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 5.8e-89 331.6 328 49.7
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 7.5e-89 331.3 256 59.4
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 4.9e-88 328.6 258 57.4
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 1.9e-87 326.6 257 59.1
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 1.9e-87 326.6 275 59.6
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 2.4e-87 326.2 276 55.4
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 2.4e-87 326.2 256 58.6
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 7.1e-87 324.7 243 62.1
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 2.7e-86 322.8 315 50.2
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 4.6e-86 322.0 227 67.0
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 4.6e-86 322.0 275 56.4
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 7.8e-86 321.2 276 55.8
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 3.0e-85 319.3 254 58.7
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 8.6e-85 317.8 271 59.8
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.5e-84 316.2 278 59.4
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 7.3e-84 314.7 255 58.4
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 9.5e-84 314.3 273 54.2
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 9.5e-84 314.3 276 55.1
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 1.2e-83 313.9 277 54.5
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 1.6e-83 313.5 325 49.2
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 1.8e-82 310.1 244 56.6
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 2.4e-82 309.7 368 44.8
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 6.8e-82 308.1 255 56.9
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 8.9e-82 307.8 278 53.6
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 1.5e-81 307.0 251 58.2
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 2.2e-80 303.1 263 54.8
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 5.4e-79 298.5 272 50.7
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 8.7e-77 291.2 278 51.4
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 1.5e-76 290.4 207 65.2
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 7.3e-76 288.1 230 58.3
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 1.2e-75 287.3 202 65.8
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 3.6e-75 285.8 235 55.3
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 1.1e-74 284.3 268 52.6
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 3.1e-74 282.7 206 62.1
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 4.0e-74 282.3 207 62.3
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 9.0e-74 281.2 271 50.9
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 2.0e-73 280.0 345 46.1
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 3.8e-72 275.8 202 63.9
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 4.9e-72 275.4 202 64.4
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 1.1e-71 274.2 260 49.2
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 1.4e-71 273.9 227 55.5
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 1.9e-71 273.5 242 54.1
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 4.6e-70 268.9 193 64.2
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 1.7e-69 266.9 219 57.5
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 1.5e-68 263.8 200 59.0
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 3.3e-68 262.7 200 58.0
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 7.3e-68 261.5 255 50.6
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 4.8e-67 258.8 210 57.1
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 1.1e-66 257.7 188 66.0
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 1.1e-55 221.1 262 42.4
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 1.9e-55 220.3 260 43.1
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 2.5e-52 209.9 180 56.1
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 1.1e-50 204.5 187 48.1
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 5.3e-50 202.2 274 38.0
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 6.9e-50 201.8 201 48.8
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 9.0e-50 201.4 355 34.6
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 3.8e-48 196.1 225 44.4
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 1.4e-47 194.1 134 61.9
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 2.0e-36 157.1 174 45.4
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 4.5e-33 146.0 182 37.4
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 1.3e-32 144.4 183 38.8
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 5.9e-25 119.0 170 40.0
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 1.3e-24 117.9 125 50.4
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 5.5e-23 112.5 190 37.9
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 1.6e-17 94.4 248 28.2
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 2.6e-17 93.6 93 49.5
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 1.6e-14 84.3 71 46.5
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 4.5e-09 66.2 59 50.8
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 1.9e-07 60.8 73 43.8
HanXRQChr08g0221941 Helianthus annuus HOM05D006653 ORTHO05D008346 2.1e-06 57.4 68 51.5


User provided reference genes

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