Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 1.1e-98 363.2 180 100.0
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 7.9e-68 260.8 178 76.4
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 7.7e-63 244.2 176 72.2
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 1.9e-61 239.6 175 70.9
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 1.9e-61 239.6 181 68.0
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 3.2e-61 238.8 178 69.7
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 3.2e-61 238.8 175 69.7
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 5.5e-61 238.0 178 72.5
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 1.2e-60 236.9 178 70.8
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 2.7e-60 235.7 175 71.4
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 2.7e-60 235.7 178 69.7
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 3.6e-60 235.3 182 69.8
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 6.1e-60 234.6 179 68.2
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 7.9e-60 234.2 184 71.2
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 1.8e-59 233.0 177 70.1
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 1.8e-59 233.0 183 70.5
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 2.3e-59 232.6 177 68.9
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 2.3e-59 232.6 176 69.9
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 2.3e-59 232.6 177 71.8
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 3.0e-59 232.3 175 70.3
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 3.9e-59 231.9 175 69.7
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 6.7e-59 231.1 176 66.5
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 6.7e-59 231.1 176 66.5
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 6.7e-59 231.1 176 66.5
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 6.7e-59 231.1 177 67.2
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 6.7e-59 231.1 182 68.1
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 8.8e-59 230.7 176 67.0
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 1.1e-58 230.3 175 69.1
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 2.0e-58 229.6 176 65.9
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 3.3e-58 228.8 183 69.4
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 5.7e-58 228.0 176 65.9
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 5.7e-58 228.0 176 65.9
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 9.7e-58 227.3 183 68.9
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 9.7e-58 227.3 180 68.9
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 1.3e-57 226.9 183 68.9
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 1.7e-57 226.5 176 66.5
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 2.2e-57 226.1 199 63.3
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 2.8e-57 225.7 182 68.1
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 2.8e-57 225.7 178 67.4
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 3.7e-57 225.3 176 66.5
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 3.7e-57 225.3 176 66.5
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 3.7e-57 225.3 176 66.5
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 8.2e-57 224.2 176 65.9
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 8.2e-57 224.2 176 65.9
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 8.2e-57 224.2 177 67.8
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 1.1e-56 223.8 176 68.2
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 1.1e-56 223.8 184 67.4
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 1.8e-56 223.0 176 67.6
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 4.1e-56 221.9 176 67.0
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 4.1e-56 221.9 177 64.4
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 5.3e-56 221.5 176 65.9
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 5.3e-56 221.5 176 65.9
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 1.5e-55 219.9 175 65.7
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 2.6e-55 219.2 169 69.2
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 2.6e-55 219.2 169 66.3
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 3.4e-55 218.8 178 66.3
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 3.4e-55 218.8 178 66.3
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 7.7e-55 217.6 169 68.6
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 1.7e-54 216.5 175 65.1
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 2.2e-54 216.1 176 64.8
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 2.2e-54 216.1 197 59.9
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 2.2e-54 216.1 145 74.5
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 2.2e-54 216.1 176 65.9
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 2.9e-54 215.7 146 76.0
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 5.0e-54 214.9 176 63.1
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 1.1e-53 213.8 172 65.1
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 1.1e-53 213.8 189 64.0
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 1.1e-53 213.8 177 65.0
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 1.1e-53 213.8 180 64.4
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 1.9e-53 213.0 179 61.5
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 1.9e-53 213.0 182 65.9
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 2.5e-53 212.6 200 59.5
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 2.5e-53 212.6 120 83.3
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 4.2e-53 211.8 182 62.1
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 4.2e-53 211.8 177 64.4
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 5.5e-53 211.5 177 63.8
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 5.5e-53 211.5 181 63.5
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 7.2e-53 211.1 184 62.5
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 9.4e-53 210.7 156 71.8
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 1.2e-52 210.3 179 62.6
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 1.2e-52 210.3 181 63.5
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 2.1e-52 209.5 175 62.3
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 4.7e-52 208.4 180 61.7
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 4.7e-52 208.4 175 61.7
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 1.0e-51 207.2 182 58.8
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 1.0e-51 207.2 134 76.1
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 2.3e-51 206.1 126 77.0
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 2.3e-51 206.1 179 62.6
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 3.0e-51 205.7 134 76.1
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 6.7e-51 204.5 137 76.6
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 9.7e-50 200.7 181 64.1
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 8.2e-49 197.6 184 62.0
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 1.4e-48 196.8 195 61.5
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 2.2e-46 189.5 138 66.7
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 2.9e-46 189.1 115 79.1
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 2.9e-46 189.1 181 54.1
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 6.5e-46 188.0 184 58.2
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 8.0e-44 181.0 179 55.9
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 7.5e-42 174.5 120 67.5
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 1.3e-41 173.7 121 69.4
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 1.8e-40 169.9 181 51.9
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 5.3e-40 168.3 127 65.4
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.7e-33 146.7 107 68.2
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 6.3e-33 144.8 103 68.0
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 2.3e-30 136.3 123 58.5
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 6.5e-30 134.8 181 49.2
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 1.1e-29 134.0 120 62.5
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 5.4e-24 115.2 68 80.9
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 2.9e-22 109.4 58 84.5
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 3.8e-22 109.0 124 52.4
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 5.6e-21 105.1 125 50.4
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 3.0e-19 99.4 112 52.7
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 1.3e-09 67.4 91 50.5
unitig_90.g27575 Utricularia gibba HOM05D007229 ORTHO05D009131 6.0e-07 58.5 60 55.0


User provided reference genes

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