Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.27249 Avicennia marina HOM05D007111 ORTHO05D008698 1.3e-111 406.4 200 100.0
Migut.F00562 Erythranthe guttata HOM05D007111 ORTHO05D008698 1.7e-10 70.5 62 61.3
Lj1A970T56 Lonicera japonica HOM05D007111 ORTHO05D008698 1.7e-10 70.5 60 60.0
SGA_v2.0_scaffold44G16613 Striga asiatica HOM05D007111 ORTHO05D008698 1.7e-10 70.5 63 61.9
EL10Ac2g02692 Beta vulgaris HOM05D007111 ORTHO05D008698 2.2e-10 70.1 92 47.8
Potri.013G092900 Populus trichocarpa HOM05D007111 ORTHO05D008698 8.4e-10 68.2 61 60.7
Dinv34512 Davidia involucrata HOM05D007111 ORTHO05D008698 1.1e-09 67.8 60 58.3
Cfa001180 Carpinus fangiana HOM05D007111 ORTHO05D008698 1.4e-09 67.4 61 59.0
Nitab4.5_0001493g0010 Nicotiana tabacum HOM05D007111 ORTHO05D008698 1.9e-09 67.0 61 60.7
Oeu001371.1 Olea europaea HOM05D007111 ORTHO05D008698 1.9e-09 67.0 61 62.3
Haze_17381 Corylus avellana HOM05D007111 ORTHO05D008698 3.2e-09 66.2 64 56.2
Manes.07G141300 Manihot esculenta HOM05D007111 ORTHO05D008698 3.2e-09 66.2 61 60.7
Nitab4.5_0000103g0010 Nicotiana tabacum HOM05D007111 ORTHO05D008698 3.2e-09 66.2 61 59.0
SalBow3G2513 Salvia bowleyana HOM05D007111 ORTHO05D008698 3.2e-09 66.2 61 62.3
CSS0034301 Camellia sinensis var. sinensis HOM05D007111 ORTHO05D008698 4.1e-09 65.9 61 57.4
CAN.G77.12 Capsicum annuum HOM05D007111 ORTHO05D008698 4.1e-09 65.9 61 55.7
RcHm_v2.0_Chr1g0372761 Rosa chinensis HOM05D007111 ORTHO05D008698 5.4e-09 65.5 61 55.7
ClCG11G005480 Citrullus lanatus HOM05D007111 ORTHO05D008698 7.1e-09 65.1 61 59.0
MD07G1238400 Malus domestica HOM05D007111 ORTHO05D008698 7.1e-09 65.1 61 60.7
Peaxi162Scf00073g02025 Petunia axillaris HOM05D007111 ORTHO05D008698 9.2e-09 64.7 61 57.4
FvH4_7g26310 Fragaria vesca HOM05D007111 ORTHO05D008698 1.6e-08 63.9 61 57.4
FAN01G1610 Fragaria x ananassa HOM05D007111 ORTHO05D008698 1.6e-08 63.9 61 57.4
Sabra13G0079700 Salix brachista HOM05D007111 ORTHO05D008698 1.6e-08 63.9 61 57.4
Sp3g09160 Schrenkiella parvula HOM05D007111 ORTHO05D008698 1.6e-08 63.9 61 62.3
Sed0018935 Sechium edule HOM05D007111 ORTHO05D008698 1.6e-08 63.9 61 57.4
Lsat_1_v5_gn_9_60440 Lactuca sativa HOM05D007111 ORTHO05D008698 2.1e-08 63.5 61 60.7
QL08p065301 Quercus lobata HOM05D007111 ORTHO05D008698 2.1e-08 63.5 61 60.7
unitig_748.g7012 Utricularia gibba HOM05D007111 ORTHO05D008698 2.1e-08 63.5 61 60.7
Prupe.2G267200 Prunus persica HOM05D007111 ORTHO05D008698 2.7e-08 63.2 61 59.0
Ah.10g030620 Amaranthus hybridus HOM05D007111 ORTHO05D008698 3.5e-08 62.8 60 61.7
Cc02_g04850 Coffea canephora HOM05D007111 ORTHO05D008698 4.6e-08 62.4 61 59.0
Cc02_g05040 Coffea canephora HOM05D007111 ORTHO05D008698 4.6e-08 62.4 61 57.4
CsaV3_5G039230 Cucumis sativus L. HOM05D007111 ORTHO05D008698 6.0e-08 62.0 61 59.0
HanXRQChr09g0252411 Helianthus annuus HOM05D007111 ORTHO05D008698 6.0e-08 62.0 63 58.7
arahy.Tifrunner.gnm1.ann1.H2KE0M Arachis hypogaea HOM05D007111 ORTHO05D008698 1.0e-07 61.2 61 57.4
A05p38400 Brassica napus HOM05D007111 ORTHO05D008698 1.0e-07 61.2 61 60.7
CANSAT56G0317 Cannabis sativa HOM05D007111 ORTHO05D008698 1.0e-07 61.2 61 59.0
Eucgr.G03170 Eucalyptus grandis HOM05D007111 ORTHO05D008698 1.0e-07 61.2 60 56.7
BraA05t22631Z Brassica rapa HOM05D007111 ORTHO05D008698 1.3e-07 60.8 61 60.7
Atru.chr12.220 Acer truncatum HOM05D007111 ORTHO05D008698 1.7e-07 60.5 61 57.4
Carub.0003s1008 Capsella rubella HOM05D007111 ORTHO05D008698 1.7e-07 60.5 61 59.0
MELO3C022100.2 Cucumis melo HOM05D007111 ORTHO05D008698 1.7e-07 60.5 61 59.0
Thhalv10020632m.g Eutrema salsugineum HOM05D007111 ORTHO05D008698 1.7e-07 60.5 63 57.1
Sopen03g025300 Solanum pennellii HOM05D007111 ORTHO05D008698 1.7e-07 60.5 61 52.5
VMungo1309G0640 Vigna mungo HOM05D007111 ORTHO05D008698 1.7e-07 60.5 61 55.7
COL.COLO4_19495 Corchorus olitorius HOM05D007111 ORTHO05D008698 2.3e-07 60.1 60 58.3
FAN06G3859 Fragaria x ananassa HOM05D007111 ORTHO05D008698 2.3e-07 60.1 61 55.7
FAN10G2056 Fragaria x ananassa HOM05D007111 ORTHO05D008698 2.3e-07 60.1 61 55.7
Sc11g0006100 Simmondsia chinensis HOM05D007111 ORTHO05D008698 2.3e-07 60.1 55 61.8
Thecc.10G187300 Theobroma cacao HOM05D007111 ORTHO05D008698 2.3e-07 60.1 60 60.0
C05p57300 Brassica napus HOM05D007111 ORTHO05D008698 3.0e-07 59.7 61 59.0
BolC5t34385H Brassica oleracea HOM05D007111 ORTHO05D008698 3.0e-07 59.7 61 59.0
Glyma.06G140200 Glycine max HOM05D007111 ORTHO05D008698 3.0e-07 59.7 61 55.7
Gohir.A13G008600 Gossypium hirsutum HOM05D007111 ORTHO05D008698 3.0e-07 59.7 62 58.1
Phvul.009G041500 Phaseolus vulgaris HOM05D007111 ORTHO05D008698 3.0e-07 59.7 61 55.7
Solyc03g095290.3 Solanum lycopersicum HOM05D007111 ORTHO05D008698 3.0e-07 59.7 61 54.1
TAR623G1475 Trochodendron aralioides HOM05D007111 ORTHO05D008698 3.0e-07 59.7 61 50.8
vmacro09946 Vaccinium macrocarpon HOM05D007111 ORTHO05D008698 3.0e-07 59.7 53 54.7
GSVIVG01032868001 Vitis vinifera HOM05D007111 ORTHO05D008698 3.0e-07 59.7 61 57.4
arahy.Tifrunner.gnm1.ann1.8KS8EB Arachis hypogaea HOM05D007111 ORTHO05D008698 3.9e-07 59.3 61 55.7
AUR62031668 Chenopodium quinoa HOM05D007111 ORTHO05D008698 3.9e-07 59.3 60 56.7
PGR142G1265 Punica granatum HOM05D007111 ORTHO05D008698 3.9e-07 59.3 62 54.8
AUR62032551 Chenopodium quinoa HOM05D007111 ORTHO05D008698 5.1e-07 58.9 60 56.7
AL3G22360 Arabidopsis lyrata HOM05D007111 ORTHO05D008698 6.6e-07 58.5 55 60.0
DCAR_009466 Daucus carota HOM05D007111 ORTHO05D008698 6.6e-07 58.5 61 55.7
Duzib114G0721 Durio zibethinus HOM05D007111 ORTHO05D008698 6.6e-07 58.5 60 56.7
Hund15777 Selenicereus undatus HOM05D007111 ORTHO05D008698 6.6e-07 58.5 92 45.7
Ciclev10031346m.g Citrus clementina HOM05D007111 ORTHO05D008698 8.7e-07 58.2 61 55.7
ECA232G2945 Erigeron canadensis HOM05D002443 ORTHO05D002674 8.7e-07 58.2 63 55.6
CDE06G1989 Ceratophyllum demersum HOM05D007111 ORTHO05D008698 1.1e-06 57.8 61 59.0
FAN03G3512 Fragaria x ananassa HOM05D007111 ORTHO05D008698 1.1e-06 57.8 53 56.6
Gohir.D13G009300 Gossypium hirsutum HOM05D007111 ORTHO05D008698 1.1e-06 57.8 62 58.1
Gorai.013G010000 Gossypium raimondii HOM05D007111 ORTHO05D008698 1.1e-06 57.8 62 58.1
PSO455G0076 Papaver somniferum HOM05D007111 ORTHO05D008698 1.1e-06 57.8 68 51.5
Rhsim09G0187300 Rhododendron simsii HOM05D007111 ORTHO05D008698 1.1e-06 57.8 61 50.8
THA.LOC104816498 Tarenaya hassleriana HOM05D007111 ORTHO05D008698 1.1e-06 57.8 60 55.0
AT3G10840 Arabidopsis thaliana HOM05D007111 ORTHO05D008698 2.5e-06 56.6 55 58.2
CARHR085410 Cardamine hirsuta HOM05D007111 ORTHO05D008698 2.5e-06 56.6 57 57.9
Cpa.g.sc361.2 Carica papaya HOM05D007111 ORTHO05D008698 2.5e-06 56.6 62 54.8
Aa31LG3G3800 Aethionema arabicum HOM05D007111 ORTHO05D008698 3.3e-06 56.2 62 51.6
MBI15_g31023_MAGBIO Magnolia biondii HOM05D007111 ORTHO05D008698 3.3e-06 56.2 61 54.1
TWI09G0231 Tripterygium wilfordii HOM05D007111 ORTHO05D008698 5.6e-06 55.5 61 52.5
PSO170G0219 Papaver somniferum HOM05D007111 ORTHO05D008698 7.3e-06 55.1 68 51.5
Nn5g26779 Nelumbo nucifera HOM05D007111 ORTHO05D008698 9.6e-06 54.7 60 55.0


User provided reference genes

Program Settings