Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.26996 Avicennia marina HOM05D001307 ORTHO05D087963 1.5e-69 266.2 142 100.0
Migut.F01002 Erythranthe guttata HOM05D001307 ORTHO05D001158 5.7e-21 104.8 117 54.7
MSTRG.8538 Avicennia marina HOM05D001307 ORTHO05D001158 6.1e-15 84.7 116 47.4
SGA_v2.0_scaffold269G46284 Striga asiatica HOM05D001307 ORTHO05D001158 8.0e-15 84.3 119 48.7
SGA_v2.0_scaffold90G27625 Striga asiatica HOM05D001307 ORTHO05D001158 2.3e-14 82.8 119 47.9
Nitab4.5_0000319g0320 Nicotiana tabacum HOM05D001307 ORTHO05D001158 3.0e-14 82.4 130 47.7
SGA_v2.0_scaffold269G46288 Striga asiatica HOM05D000934 ORTHO05D000746 3.0e-14 82.4 128 45.3
Nitab4.5_0009056g0010 Nicotiana tabacum HOM05D001307 ORTHO05D001158 2.6e-13 79.3 130 46.2
CAN.G1527.5 Capsicum annuum HOM05D001307 ORTHO05D001158 2.2e-12 76.3 129 44.2
Nitab4.5_0007028g0020 Nicotiana tabacum HOM05D001307 ORTHO05D001158 2.8e-12 75.9 105 50.5
Rhsim03G0212900 Rhododendron simsii HOM05D001307 ORTHO05D001158 4.9e-12 75.1 130 42.3
PGSC0003DMG402026150 Solanum tuberosum HOM05D001307 ORTHO05D001158 8.3e-12 74.3 124 41.9
PGSC0003DMG401026150 Solanum tuberosum HOM05D001307 ORTHO05D001158 1.4e-11 73.6 131 42.0
Oeu037037.1 Olea europaea HOM05D001307 ORTHO05D001158 4.1e-11 72.0 113 46.0
Sopen07g034450 Solanum pennellii HOM05D001307 ORTHO05D001158 7.0e-11 71.2 128 40.6
vmacro06423 Vaccinium macrocarpon HOM05D001307 ORTHO05D001158 7.0e-11 71.2 105 43.8
Solyc07g066270.4 Solanum lycopersicum HOM05D001307 ORTHO05D001158 9.2e-11 70.9 128 40.6
Dinv02486 Davidia involucrata HOM05D001307 ORTHO05D001158 1.2e-10 70.5 124 42.7
Dinv29232 Davidia involucrata HOM05D001307 ORTHO05D001158 1.2e-10 70.5 124 42.7
TAR629G3069 Trochodendron aralioides HOM05D001307 ORTHO05D001158 1.2e-10 70.5 105 42.9
unitig_748.g7284 Utricularia gibba HOM05D001307 ORTHO05D001158 1.6e-10 70.1 127 41.7
Actinidia34253 Actinidia chinensis HOM05D001307 ORTHO05D001158 2.7e-10 69.3 107 46.7
Solyc03g082580.3 Solanum lycopersicum HOM05D001307 ORTHO05D001158 1.3e-09 67.0 75 49.3
Duzib084G0582 Durio zibethinus HOM05D001307 ORTHO05D001158 2.3e-09 66.2 112 42.0
COL.COLO4_14339 Corchorus olitorius HOM05D001307 ORTHO05D001158 2.9e-09 65.9 113 39.8
TAR374G1416 Trochodendron aralioides HOM05D001307 ORTHO05D001158 2.9e-09 65.9 106 42.5
Nitab4.5_0009056g0020 Nicotiana tabacum HOM05D001307 ORTHO05D001158 5.0e-09 65.1 127 40.2
Hund21037 Selenicereus undatus HOM05D001307 ORTHO05D001158 6.6e-09 64.7 63 52.4
TAR375G0956 Trochodendron aralioides HOM05D001307 ORTHO05D001158 8.6e-09 64.3 130 38.5
Sopen03g022340 Solanum pennellii HOM05D001307 ORTHO05D001158 1.1e-08 63.9 74 48.6
Thecc.03G205500 Theobroma cacao HOM05D001307 ORTHO05D001158 1.1e-08 63.9 63 52.4
Gorai.008G266100 Gossypium raimondii HOM05D001307 ORTHO05D001158 1.5e-08 63.5 112 42.9
Eucgr.A01425 Eucalyptus grandis HOM05D001307 ORTHO05D001158 1.9e-08 63.2 120 40.8
PGSC0003DMG400018511 Solanum tuberosum HOM05D001307 ORTHO05D001158 2.5e-08 62.8 130 40.8
TWI53G1415 Tripterygium wilfordii HOM05D001307 ORTHO05D001158 3.3e-08 62.4 63 52.4
Nn1g00684 Nelumbo nucifera HOM05D001307 ORTHO05D001158 5.6e-08 61.6 59 61.0
Nn3g18807 Nelumbo nucifera HOM05D001307 ORTHO05D001158 5.6e-08 61.6 59 59.3
Peaxi162Scf00740g00559 Petunia axillaris HOM05D001307 ORTHO05D001158 5.6e-08 61.6 113 44.2
Cpa.g.sc3.135 Carica papaya HOM05D001307 ORTHO05D001158 7.3e-08 61.2 111 39.6
vmacro06422 Vaccinium macrocarpon HOM05D001307 ORTHO05D001158 7.3e-08 61.2 63 47.6
A06p35220 Brassica napus HOM05D001307 ORTHO05D001158 9.5e-08 60.8 111 36.9
BraA06t26444Z Brassica rapa HOM05D001307 ORTHO05D001158 9.5e-08 60.8 111 36.9
PGR102G2143 Punica granatum HOM05D001307 ORTHO05D001158 9.5e-08 60.8 110 40.9
Rhsim09G0208500 Rhododendron simsii HOM05D001307 ORTHO05D001158 9.5e-08 60.8 124 41.1
Lj3A898T33 Lonicera japonica HOM05D001307 ORTHO05D001158 1.2e-07 60.5 98 45.9
Nitab4.5_0011053g0030 Nicotiana tabacum HOM05D001307 ORTHO05D001158 1.2e-07 60.5 48 60.4
Aa31LG11G3670 Aethionema arabicum HOM05D001307 ORTHO05D001158 1.6e-07 60.1 74 45.9
Gohir.A12G247400 Gossypium hirsutum HOM05D001307 ORTHO05D001158 2.1e-07 59.7 63 49.2
Nn1g00384 Nelumbo nucifera HOM05D001307 ORTHO05D001158 2.1e-07 59.7 64 54.7
BraA09t36296Z Brassica rapa HOM05D001307 ORTHO05D001158 2.8e-07 59.3 122 36.9
Gohir.D12G248100 Gossypium hirsutum HOM05D001307 ORTHO05D001158 2.8e-07 59.3 114 43.0
CSS0010525 Camellia sinensis var. sinensis HOM05D001307 ORTHO05D001158 3.6e-07 58.9 102 41.2
BcaC04g23538 Brassica carinata HOM05D001307 ORTHO05D001158 8.0e-07 57.8 126 38.1
GSVIVG01038616001 Vitis vinifera HOM05D001307 ORTHO05D001158 8.0e-07 57.8 58 50.0
BcaNung01230 Brassica carinata HOM05D001307 ORTHO05D001158 1.0e-06 57.4 108 37.0
CiPaw.05G201800 Carya illinoinensis HOM05D001307 ORTHO05D001158 1.0e-06 57.4 58 50.0
RcHm_v2.0_Chr1g0382391 Rosa chinensis HOM05D001307 ORTHO05D001158 1.0e-06 57.4 123 41.5
BolC9t53639H Brassica oleracea HOM05D001307 ORTHO05D001158 1.4e-06 57.0 126 38.1
QL05p021139 Quercus lobata HOM05D001307 ORTHO05D001158 1.4e-06 57.0 89 43.8
TWI14G1250 Tripterygium wilfordii HOM05D001307 ORTHO05D001158 1.4e-06 57.0 116 37.1
DCAR_015936 Daucus carota HOM05D001307 ORTHO05D001158 1.8e-06 56.6 103 36.9
MD07G1296700 Malus domestica HOM05D001307 ORTHO05D001158 1.8e-06 56.6 127 37.8
QL09p007520 Quercus lobata HOM05D001307 ORTHO05D001158 1.8e-06 56.6 54 53.7
Sp2g22930 Schrenkiella parvula HOM05D001307 ORTHO05D001158 1.8e-06 56.6 107 35.5
BcaB04g19827 Brassica carinata HOM05D001307 ORTHO05D001158 2.3e-06 56.2 75 40.0
C07p43330 Brassica napus HOM05D001307 ORTHO05D001158 2.3e-06 56.2 114 36.0
Potri.015G007200 Populus trichocarpa HOM05D001307 ORTHO05D001158 2.3e-06 56.2 114 34.2
THA.LOC104814946 Tarenaya hassleriana HOM05D001307 ORTHO05D001158 2.3e-06 56.2 59 47.5
Actinidia08681 Actinidia chinensis HOM05D001307 ORTHO05D001158 3.0e-06 55.8 101 44.6
Lsat_1_v5_gn_8_4640 Lactuca sativa HOM05D001307 ORTHO05D001158 3.0e-06 55.8 81 42.0
Manes.01G038700 Manihot esculenta HOM05D001307 ORTHO05D001158 3.0e-06 55.8 78 44.9
Manes.05G193300 Manihot esculenta HOM05D001307 ORTHO05D001158 3.0e-06 55.8 55 52.7
Atru.chr12.2335 Acer truncatum HOM05D001307 ORTHO05D001158 4.0e-06 55.5 112 34.8
TAR375G0437 Trochodendron aralioides HOM05D001307 ORTHO05D001158 4.0e-06 55.5 53 54.7
BcaNung02033 Brassica carinata HOM05D001307 ORTHO05D001158 5.2e-06 55.1 114 35.1
BolC7t44861H Brassica oleracea HOM05D001307 ORTHO05D001158 5.2e-06 55.1 114 35.1
Potri.012G024400 Populus trichocarpa HOM05D001307 ORTHO05D001158 5.2e-06 55.1 117 37.6
Cfa016186 Carpinus fangiana HOM05D001307 ORTHO05D001158 6.8e-06 54.7 124 40.3
Atru.chr12.2336 Acer truncatum HOM05D001307 ORTHO05D001158 8.9e-06 54.3 101 35.6
CSS0020627 Camellia sinensis var. sinensis HOM05D001307 ORTHO05D001158 8.9e-06 54.3 58 50.0


User provided reference genes

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