Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.26975 Avicennia marina HOM05D005840 ORTHO05D007144 9.4e-159 563.5 278 100.0
MSTRG.8611 Avicennia marina HOM05D005840 ORTHO05D007144 1.7e-123 446.4 285 78.6
Migut.F00150 Erythranthe guttata HOM05D005840 ORTHO05D007144 5.4e-122 441.4 290 77.6
SGA_v2.0_scaffold18G08468 Striga asiatica HOM05D005840 ORTHO05D007144 6.6e-112 407.9 282 74.8
SalBow6G2506 Salvia bowleyana HOM05D005840 ORTHO05D007144 5.2e-109 398.3 285 74.0
Oeu023690.1 Olea europaea HOM05D005840 ORTHO05D007144 6.2e-102 374.8 284 69.7
unitig_37.g11995 Utricularia gibba HOM05D005840 ORTHO05D007144 1.1e-98 364.0 285 66.0
PGSC0003DMG400000562 Solanum tuberosum HOM05D005840 ORTHO05D007144 1.6e-94 350.1 282 66.3
Dinv35383 Davidia involucrata HOM05D005840 ORTHO05D007144 6.2e-94 348.2 285 63.9
CAN.G303.23 Capsicum annuum HOM05D005840 ORTHO05D007144 1.4e-93 347.1 279 65.6
Solyc03g081220.1 Solanum lycopersicum HOM05D005840 ORTHO05D007144 1.4e-93 347.1 282 66.0
Sopen03g021950 Solanum pennellii HOM05D005840 ORTHO05D007144 8.9e-93 344.4 282 65.6
Nitab4.5_0010809g0010 Nicotiana tabacum HOM05D005840 ORTHO05D007144 1.2e-92 344.0 280 66.1
Nitab4.5_0000319g0020 Nicotiana tabacum HOM05D005840 ORTHO05D007144 2.6e-92 342.8 280 66.1
Oeu055391.1 Olea europaea HOM05D005840 ORTHO05D007144 6.6e-88 328.2 235 70.6
Cc02_g00800 Coffea canephora HOM05D005840 ORTHO05D007144 2.5e-87 326.2 281 63.7
DCAR_008987 Daucus carota HOM05D005840 ORTHO05D007144 9.6e-87 324.3 273 61.5
CSS0020402 Camellia sinensis var. sinensis HOM05D005840 ORTHO05D007144 1.3e-83 313.9 278 61.9
TAR375G0732 Trochodendron aralioides HOM05D005840 ORTHO05D007144 6.4e-83 311.6 283 61.5
Peaxi162Scf00912g10012 Petunia axillaris HOM05D005840 ORTHO05D007144 9.3e-82 307.8 224 68.8
Lsat_1_v5_gn_9_49980 Lactuca sativa HOM05D005840 ORTHO05D007144 5.6e-79 298.5 273 59.0
Hma1.2p1_0094F.1_g047400 Hydrangea macrophylla HOM05D005840 ORTHO05D007144 1.3e-78 297.4 221 69.2
Nn3g18788 Nelumbo nucifera HOM05D005840 ORTHO05D007144 1.1e-77 294.3 282 57.4
MD07G1299300 Malus domestica HOM05D005840 ORTHO05D007144 4.0e-77 292.4 272 58.1
HanXRQChr10g0305331 Helianthus annuus HOM05D005840 ORTHO05D007144 5.3e-77 292.0 277 58.5
Lalb_Chr23g0271941 Lupinus albus HOM05D005840 ORTHO05D007144 5.3e-77 292.0 278 59.0
Lj3P895T18 Lonicera japonica HOM05D005840 ORTHO05D007144 9.0e-77 291.2 218 66.5
Phvul.009G044800 Phaseolus vulgaris HOM05D005840 ORTHO05D007144 2.0e-76 290.0 280 58.2
Manes.01G043400 Manihot esculenta HOM05D005840 ORTHO05D007144 2.6e-76 289.7 277 56.3
Atru.chr12.2435 Acer truncatum HOM05D005840 ORTHO05D007144 5.8e-76 288.5 276 59.1
Cpa.g.sc3.150 Carica papaya HOM05D005840 ORTHO05D007144 5.8e-76 288.5 279 55.6
QL09p007163 Quercus lobata HOM05D005840 ORTHO05D007144 5.8e-76 288.5 279 56.3
Lj1g0001826 Lotus japonicus HOM05D005840 ORTHO05D007144 3.8e-75 285.8 285 55.4
unitig_0.g2444 Utricularia gibba HOM05D005840 ORTHO05D007144 4.9e-75 285.4 202 68.3
VMungo1309G2416 Vigna mungo HOM05D005840 ORTHO05D007144 6.4e-75 285.0 280 57.5
Ah.13g070770 Amaranthus hybridus HOM05D005840 ORTHO05D007144 8.4e-75 284.6 278 55.0
FvH4_7g32940 Fragaria vesca HOM05D005840 ORTHO05D007144 8.4e-75 284.6 272 56.6
PSO063G5360 Papaver somniferum HOM05D005840 ORTHO05D007144 1.9e-74 283.5 281 57.3
FAN10G3655 Fragaria x ananassa HOM05D005840 ORTHO05D007144 2.4e-74 283.1 274 56.2
unitig_92.g28240 Utricularia gibba HOM05D005840 ORTHO05D007144 2.4e-74 283.1 201 70.1
AUR62028079 Chenopodium quinoa HOM05D005840 ORTHO05D007144 3.2e-74 282.7 280 55.7
TWI14G0550 Tripterygium wilfordii HOM05D005840 ORTHO05D007144 3.2e-74 282.7 273 56.8
Actinidia34271 Actinidia chinensis HOM05D005840 ORTHO05D007144 5.5e-74 282.0 211 67.8
FAN10G0422 Fragaria x ananassa HOM05D005840 ORTHO05D007144 7.1e-74 281.6 274 55.5
Lalb_Chr08g0239571 Lupinus albus HOM05D005840 ORTHO05D007144 7.1e-74 281.6 281 57.3
Thecc.03G209000 Theobroma cacao HOM05D005840 ORTHO05D007144 7.1e-74 281.6 281 56.9
FAN03G2485 Fragaria x ananassa HOM05D005840 ORTHO05D007144 9.3e-74 281.2 273 56.0
Duzib084G0063 Durio zibethinus HOM05D005840 ORTHO05D007144 1.2e-73 280.8 281 58.0
Lsat_1_v5_gn_2_135020 Lactuca sativa HOM05D005840 ORTHO05D007144 1.6e-73 280.4 270 55.2
Psat5g071840 Pisum sativum HOM05D005840 ORTHO05D007144 1.6e-73 280.4 280 54.6
Potri.015G002500 Populus trichocarpa HOM05D005840 ORTHO05D007144 2.1e-73 280.0 285 53.3
THA.LOC104798983 Tarenaya hassleriana HOM05D005840 ORTHO05D007144 2.1e-73 280.0 282 52.8
AUR62005991 Chenopodium quinoa HOM05D005840 ORTHO05D007144 2.7e-73 279.6 280 55.4
TPR.G33360 Trifolium pratense HOM05D005840 ORTHO05D007144 3.5e-73 279.3 286 53.5
CANSAT21G1965 Cannabis sativa HOM05D005840 ORTHO05D007144 4.6e-73 278.9 276 56.2
Ca_16781_v3 Cicer arietinum L. HOM05D005840 ORTHO05D007144 6.0e-73 278.5 275 55.6
Prupe.2G319100 Prunus persica HOM05D005840 ORTHO05D007144 1.3e-72 277.3 278 54.7
Medtr3g092810 Medicago truncatula HOM05D005840 ORTHO05D007144 2.3e-72 276.6 286 53.8
FAN01G0139 Fragaria x ananassa HOM05D005840 ORTHO05D007144 3.9e-72 275.8 274 55.5
A09p06480 Brassica napus HOM05D005840 ORTHO05D007144 1.1e-71 274.2 277 53.8
ClCG01G000060 Citrullus lanatus HOM05D005840 ORTHO05D007144 1.1e-71 274.2 240 58.3
Sc19g0000580 Simmondsia chinensis HOM05D005840 ORTHO05D007144 1.1e-71 274.2 275 53.5
Aa31LG11G3710 Aethionema arabicum HOM05D005840 ORTHO05D007144 1.9e-71 273.5 277 54.2
BraA09t36291Z Brassica rapa HOM05D005840 ORTHO05D007144 1.9e-71 273.5 277 53.4
Gohir.A11G016700 Gossypium hirsutum HOM05D005840 ORTHO05D007144 3.3e-71 272.7 273 56.4
RcHm_v2.0_Chr1g0382901 Rosa chinensis HOM05D005840 ORTHO05D007144 3.3e-71 272.7 277 54.2
Gorai.004G125300 Gossypium raimondii HOM05D005840 ORTHO05D007144 4.3e-71 272.3 279 56.3
MD01G1228500 Malus domestica HOM05D005840 ORTHO05D007144 5.6e-71 271.9 272 55.1
PGR042G3207 Punica granatum HOM05D005840 ORTHO05D007144 5.6e-71 271.9 237 61.2
vmacro22785 Vaccinium macrocarpon HOM05D005840 ORTHO05D007144 5.6e-71 271.9 331 51.1
Gohir.A08G104700 Gossypium hirsutum HOM05D005840 ORTHO05D007144 7.4e-71 271.6 279 55.9
CiPaw.06G041000 Carya illinoinensis HOM05D005840 ORTHO05D007144 9.6e-71 271.2 211 63.5
MBI12_g45814_MAGBIO Magnolia biondii HOM05D005840 ORTHO05D007144 1.3e-70 270.8 275 54.2
AL6G36040 Arabidopsis lyrata HOM05D005840 ORTHO05D007144 2.8e-70 269.6 281 53.0
Gohir.D11G016500 Gossypium hirsutum HOM05D005840 ORTHO05D007144 2.8e-70 269.6 280 55.0
Sp2g22870 Schrenkiella parvula HOM05D005840 ORTHO05D007144 2.8e-70 269.6 277 54.2
Rhsim03G0215700 Rhododendron simsii HOM05D005840 ORTHO05D007144 3.7e-70 269.2 226 63.3
ECA232G4892 Erigeron canadensis HOM05D005840 ORTHO05D007144 4.8e-70 268.9 208 62.0
Sed0003210 Sechium edule HOM05D005840 ORTHO05D007144 4.8e-70 268.9 275 53.1
Thhalv10005309m.g Eutrema salsugineum HOM05D005840 ORTHO05D007144 6.2e-70 268.5 277 53.1
Sabra15G0001600 Salix brachista HOM05D005840 ORTHO05D007144 6.2e-70 268.5 263 54.0
Glyma.06G136800 Glycine max HOM05D005840 ORTHO05D007144 8.1e-70 268.1 283 53.0
EL10Ac3g05171 Beta vulgaris HOM05D005840 ORTHO05D007144 1.1e-69 267.7 213 62.9
AT5G24460 Arabidopsis thaliana HOM05D005840 ORTHO05D007144 1.4e-69 267.3 278 52.5
Carub.0006s2229 Capsella rubella HOM05D005840 ORTHO05D007144 1.4e-69 267.3 279 53.8
PSO782G2283 Papaver somniferum HOM05D005840 ORTHO05D007144 1.8e-69 266.9 211 63.5
Glyma.04G228100 Glycine max HOM05D005840 ORTHO05D007144 2.4e-69 266.5 284 53.2
Gorai.007G017300 Gossypium raimondii HOM05D005840 ORTHO05D007144 2.4e-69 266.5 280 55.0
Haze_00300 Corylus avellana HOM05D005840 ORTHO05D007144 4.0e-69 265.8 205 63.9
CDE04G1956 Ceratophyllum demersum HOM05D005840 ORTHO05D007144 5.3e-69 265.4 246 58.1
CARHR188950 Cardamine hirsuta HOM05D005840 ORTHO05D007144 2.6e-68 263.1 278 51.8
Ciclev10021557m.g Citrus clementina HOM05D005840 ORTHO05D007144 3.4e-68 262.7 265 55.5
BolC9t53635H Brassica oleracea HOM05D005840 ORTHO05D007144 4.5e-68 262.3 278 52.5
MELO3C005919.2 Cucumis melo HOM05D005840 ORTHO05D007144 5.8e-68 261.9 276 49.3
BcaC04g23543 Brassica carinata HOM05D005840 ORTHO05D007144 3.8e-67 259.2 277 51.6
C09p07230 Brassica napus HOM05D005840 ORTHO05D007144 3.8e-67 259.2 277 51.6
A06p35290 Brassica napus HOM05D005840 ORTHO05D007144 1.9e-66 256.9 274 51.8
CDE12G0905 Ceratophyllum demersum HOM05D005840 ORTHO05D007144 3.2e-66 256.1 219 61.2
vmacro06444 Vaccinium macrocarpon HOM05D005840 ORTHO05D007144 5.5e-66 255.4 279 54.1
COL.COLO4_14373 Corchorus olitorius HOM05D005840 ORTHO05D007144 7.9e-65 251.5 208 61.1
BcaNung01236 Brassica carinata HOM05D005840 ORTHO05D007144 1.0e-64 251.1 278 49.3
BcaB04g19821 Brassica carinata HOM05D005840 ORTHO05D007144 1.8e-64 250.4 208 58.2
C07p43220 Brassica napus HOM05D005840 ORTHO05D007144 1.8e-64 250.4 208 58.2
CsaV3_5G000100 Cucumis sativus L. HOM05D005840 ORTHO05D007144 1.8e-64 250.4 270 48.5
BraA06t26455Z Brassica rapa HOM05D005840 ORTHO05D007144 6.7e-64 248.4 287 49.5
Actinidia08699 Actinidia chinensis HOM05D005840 ORTHO05D007144 1.8e-61 240.4 218 58.3
Cc11_g13290 Coffea canephora HOM05D005840 ORTHO05D007144 2.4e-61 240.0 221 61.5
Aqoxy6G02459 Aquilegia oxysepala HOM05D005840 ORTHO05D007144 6.9e-61 238.4 237 54.4
Aqoxy6G02489 Aquilegia oxysepala HOM05D005840 ORTHO05D007144 6.9e-61 238.4 237 54.4
Sed0025728 Sechium edule HOM05D005840 ORTHO05D007144 2.5e-58 229.9 211 54.5
ATR0661G235 Amborella trichopoda HOM05D005840 ORTHO05D007144 1.8e-53 213.8 205 54.6
HPP92_022381 Vanilla planifolia HOM05D005840 ORTHO05D007144 6.9e-53 211.8 216 55.1
SEGI_38224 Sequoiadendron giganteum HOM05D005840 ORTHO05D007144 2.9e-51 206.5 201 49.3
BcaB04g19819 Brassica carinata HOM05D005840 ORTHO05D007144 3.7e-46 189.5 166 57.8
SHI02291 Sapria himalayana HOM05D005840 ORTHO05D007144 5.3e-45 185.7 209 48.8
Zm00001eb272540 Zea mays HOM05D005840 ORTHO05D007144 8.5e-43 178.3 222 52.3
Mapoly0031s0111 Marchantia polymorpha HOM05D005840 ORTHO05D007144 1.4e-40 171.0 217 42.4
Os06g0712200 Oryza sativa ssp. japonica HOM05D005840 ORTHO05D007144 1.1e-39 167.9 237 48.5
SMO140G0013 Selaginella moellendorffii HOM05D005840 ORTHO05D007144 1.7e-38 164.1 217 43.3
Pp3c3_29470 Physcomitrium patens HOM05D005840 ORTHO05D007144 2.8e-38 163.3 236 41.5
COL.COLO4_12096 Corchorus olitorius HOM05D005840 ORTHO05D007144 4.1e-37 159.5 177 49.7
COL.COLO4_35601 Corchorus olitorius HOM05D005840 ORTHO05D007144 2.5e-34 150.2 219 40.6
BcaNung02020 Brassica carinata HOM05D005840 ORTHO05D007144 2.6e-31 140.2 204 43.6
CBR_g20004 Chara braunii HOM05D005840 ORTHO05D007144 8.2e-30 135.2 176 47.2
SalBow4G0698 Salvia bowleyana HOM05D001856 ORTHO05D007144 7.7e-28 128.6 81 76.5
Gohir.D08G116401 Gossypium hirsutum HOM05D005840 ORTHO05D007144 7.2e-26 122.1 114 58.8
BcaB04g19822 Brassica carinata HOM05D005840 ORTHO05D007144 3.6e-25 119.8 119 53.8
CAN.G2.4 Capsicum annuum HOM05D005840 ORTHO05D007144 5.4e-21 105.9 79 64.6
Duzib114G0266 Durio zibethinus HOM05D005840 ORTHO05D007144 7.0e-21 105.5 146 41.8
SalBow6G2140 Salvia bowleyana HOM05D005840 ORTHO05D007144 2.3e-19 100.5 51 86.3
MCO06G087 Micromonas commoda HOM05D005840 ORTHO05D007144 7.2e-18 95.5 229 35.8
Cre01.g012300 Chlamydomonas reinhardtii HOM05D005840 ORTHO05D007144 4.5e-12 76.3 168 35.7
COL.COLO4_35602 Corchorus olitorius HOM05D005840 ORTHO05D007144 2.1e-09 67.4 90 42.2
Potri.010G149800 Populus trichocarpa HOM05D005840 ORTHO05D007144 2.1e-09 67.4 77 44.2


User provided reference genes

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