Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 7.0e-55 217.2 126 100.0
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 6.8e-42 174.1 130 74.6
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 2.3e-37 159.1 127 66.1
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 1.5e-36 156.4 104 81.7
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 2.5e-36 155.6 127 70.1
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 9.5e-36 153.7 124 69.4
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 4.7e-35 151.4 130 71.5
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 8.1e-35 150.6 130 72.3
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.8e-34 149.4 127 66.9
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 3.1e-34 148.7 105 75.2
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 1.5e-33 146.4 127 62.2
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 2.6e-33 145.6 126 63.5
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 2.6e-33 145.6 126 63.5
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.3e-32 143.3 127 66.1
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 1.3e-32 143.3 127 65.4
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 2.2e-32 142.5 108 75.0
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 6.4e-32 141.0 130 68.5
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 6.4e-32 141.0 126 65.9
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 1.9e-31 139.4 124 62.1
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 1.9e-31 139.4 127 62.2
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 1.9e-31 139.4 128 64.1
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 3.2e-31 138.7 130 62.3
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 3.2e-31 138.7 159 54.1
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 1.2e-30 136.7 127 62.2
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 1.2e-30 136.7 134 63.4
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 1.2e-30 136.7 130 60.8
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 2.1e-30 136.0 128 66.4
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 3.5e-30 135.2 127 63.0
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 1.0e-29 133.7 134 59.0
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 1.3e-29 133.3 127 60.6
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 1.7e-29 132.9 127 56.7
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.7e-29 132.9 130 61.5
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 2.3e-29 132.5 105 66.7
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 3.0e-29 132.1 130 61.5
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 3.0e-29 132.1 130 61.5
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 3.0e-29 132.1 128 60.2
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 3.9e-29 131.7 136 59.6
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 5.1e-29 131.3 135 65.2
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 6.6e-29 131.0 136 58.8
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 1.9e-28 129.4 127 59.8
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 3.3e-28 128.6 128 62.5
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 4.3e-28 128.3 133 60.2
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 5.6e-28 127.9 135 64.4
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 5.6e-28 127.9 127 58.3
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 5.6e-28 127.9 132 58.3
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 7.3e-28 127.5 133 59.4
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 1.2e-27 126.7 124 58.1
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 1.2e-27 126.7 126 57.1
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 1.6e-27 126.3 127 64.6
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 3.6e-27 125.2 127 58.3
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 4.7e-27 124.8 107 66.4
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 4.7e-27 124.8 105 64.8
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 4.7e-27 124.8 129 60.5
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 6.2e-27 124.4 133 57.1
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 6.2e-27 124.4 127 55.9
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 8.1e-27 124.0 152 53.9
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 8.1e-27 124.0 129 62.0
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 1.1e-26 123.6 131 56.5
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 1.4e-26 123.2 128 57.0
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 1.4e-26 123.2 76 82.9
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 1.8e-26 122.9 127 60.6
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 2.4e-26 122.5 130 60.8
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 3.1e-26 122.1 113 62.8
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 8.9e-26 120.6 130 53.8
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.5e-25 119.8 132 61.4
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 2.6e-25 119.0 129 59.7
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 3.4e-25 118.6 130 53.1
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 3.4e-25 118.6 134 56.0
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 4.4e-25 118.2 105 62.9
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 5.8e-25 117.9 129 57.4
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 9.9e-25 117.1 128 48.4
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 9.9e-25 117.1 128 48.4
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 9.9e-25 117.1 128 48.4
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 9.9e-25 117.1 136 54.4
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 1.3e-24 116.7 126 55.6
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 1.7e-24 116.3 130 57.7
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 2.9e-24 115.5 105 61.0
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 4.9e-24 114.8 76 80.3
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 4.9e-24 114.8 126 54.8
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 8.4e-24 114.0 97 63.9
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 8.4e-24 114.0 127 48.8
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 1.1e-23 113.6 127 48.0
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 1.1e-23 113.6 127 48.8
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 1.1e-23 113.6 127 48.0
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 1.9e-23 112.8 79 74.7
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 1.9e-23 112.8 79 74.7
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 2.4e-23 112.5 127 46.5
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 4.2e-23 111.7 131 48.9
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 4.2e-23 111.7 127 47.2
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 5.4e-23 111.3 130 50.8
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 7.1e-23 110.9 127 57.5
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 1.6e-22 109.8 130 48.5
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 1.6e-22 109.8 76 73.7
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 1.6e-22 109.8 76 73.7
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 4.6e-22 108.2 127 53.5
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 6.0e-22 107.8 133 50.4
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 1.0e-21 107.1 91 63.7
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 1.7e-21 106.3 126 57.1
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 6.6e-21 104.4 140 52.1
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 8.7e-21 104.0 126 56.3
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 1.5e-20 103.2 132 50.8
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 1.5e-20 103.2 130 48.5
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 2.8e-19 99.0 126 46.8
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 8.1e-19 97.4 130 45.4
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 3.4e-17 92.0 104 51.0
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 3.4e-17 92.0 87 57.5
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 4.6e-14 81.6 70 55.7
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 1.6e-11 73.2 76 53.9
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 4.0e-10 68.6 117 43.6
Pp3c4_15620 Physcomitrium patens HOM05D007045 ORTHO05D008872 8.4e-08 60.8 156 35.3
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 3.2e-07 58.9 109 43.1
Mapoly0084s0018 Marchantia polymorpha HOM05D007045 ORTHO05D008872 5.5e-07 58.2 112 37.5


User provided reference genes

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