Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.26816 Avicennia marina HOM05D003726 ORTHO05D003520 1.3e-205 719.5 372 100.0
Migut.L02021 Erythranthe guttata HOM05D003726 ORTHO05D003520 1.6e-70 270.8 393 48.1
SalBow4G2563 Salvia bowleyana HOM05D003726 ORTHO05D003520 5.5e-47 192.6 385 38.2
SGA_v2.0_scaffold110G31210 Striga asiatica HOM05D003726 ORTHO05D003520 1.3e-45 188.0 370 40.0
Oeu005176.1 Olea europaea HOM05D003726 ORTHO05D003520 8.2e-43 178.7 375 37.3
Dinv14505 Davidia involucrata HOM05D003726 ORTHO05D003520 5.0e-40 169.5 380 37.4
Oeu054393.1 Olea europaea HOM05D003726 ORTHO05D003520 8.5e-40 168.7 380 36.1
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 1.8e-34 151.0 398 35.2
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.5e-31 140.6 369 32.8
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 4.7e-30 136.3 406 32.8
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 5.1e-29 132.9 410 32.4
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 1.1e-28 131.7 404 31.9
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 1.1e-28 131.7 365 32.1
MD04G1154900 Malus domestica HOM05D003726 ORTHO05D003520 4.4e-28 129.8 401 32.2
Potri.016G117400 Populus trichocarpa HOM05D003726 ORTHO05D003520 4.4e-28 129.8 427 32.3
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 1.3e-27 128.3 381 33.6
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 1.4e-26 124.8 366 31.4
MD12G1168500 Malus domestica HOM05D003726 ORTHO05D003520 1.4e-26 124.8 405 29.9
Duzib093G1061 Durio zibethinus HOM05D003726 ORTHO05D003520 2.4e-26 124.0 408 31.9
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 3.1e-26 123.6 396 33.3
TWI53G1918 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 4.1e-26 123.2 396 31.6
Solyc09g005570.3 Solanum lycopersicum HOM05D003726 ORTHO05D003520 9.1e-26 122.1 367 29.4
Sopen09g001480 Solanum pennellii HOM05D003726 ORTHO05D003520 9.1e-26 122.1 367 29.4
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 1.5e-25 121.3 383 31.3
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 2.6e-25 120.6 368 32.6
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 1.0e-24 118.6 411 30.4
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 2.2e-24 117.5 453 29.1
Cpa.g.sc11.124 Carica papaya HOM05D003726 ORTHO05D003520 2.2e-24 117.5 436 30.7
Manes.09G107700 Manihot esculenta HOM05D003726 ORTHO05D003520 1.4e-23 114.8 400 31.2
Sabra16G0113500 Salix brachista HOM05D003726 ORTHO05D003520 1.4e-23 114.8 416 30.8
Sed0008005 Sechium edule HOM05D003726 ORTHO05D003520 1.4e-23 114.8 381 31.0
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 1.9e-23 114.4 411 31.6
CsaV3_3G033690 Cucumis sativus L. HOM05D003726 ORTHO05D003520 2.5e-23 114.0 379 30.9
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 1.2e-22 111.7 391 30.4
MELO3C009159.2 Cucumis melo HOM05D003726 ORTHO05D003520 1.6e-22 111.3 376 30.6
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 1.6e-22 111.3 400 30.0
CiPaw.09G210300 Carya illinoinensis HOM05D003726 ORTHO05D003520 2.7e-22 110.5 408 28.7
FAN14G0787 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.6e-22 110.2 419 30.3
Prupe.6G278700 Prunus persica HOM05D003726 ORTHO05D003520 3.6e-22 110.2 427 30.7
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 4.7e-22 109.8 421 28.5
Gohir.D04G131050 Gossypium hirsutum HOM05D003726 ORTHO05D003520 4.7e-22 109.8 361 29.9
Peaxi162Scf79720g00003 Petunia axillaris HOM05D003726 ORTHO05D003520 4.7e-22 109.8 327 31.5
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 4.7e-22 109.8 407 29.7
Gorai.012G114900 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.0e-21 108.6 361 29.9
Peaxi162Scf00170g00213 Petunia axillaris HOM05D003726 ORTHO05D003520 2.3e-21 107.5 129 46.5
FvH4_6g11320 Fragaria vesca HOM05D003726 ORTHO05D003520 5.2e-21 106.3 421 29.0
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 6.7e-21 105.9 380 30.8
Lsat_1_v5_gn_5_149441 Lactuca sativa HOM05D003726 ORTHO05D003520 2.6e-20 104.0 353 27.8
Gohir.A09G165800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 4.4e-20 103.2 379 30.9
FAN09G2526 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.2e-19 100.9 416 29.3
FAN02G2870 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.7e-19 100.1 420 28.8
Actinidia11576 Actinidia chinensis HOM05D003726 ORTHO05D003520 4.8e-19 99.8 376 29.5
Lj3g0010607 Lotus japonicus HOM05D003726 ORTHO05D003520 1.4e-18 98.2 449 28.1
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 4.1e-18 96.7 426 28.2
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 5.3e-18 96.3 194 35.1
RcHm_v2.0_Chr3g0462881 Rosa chinensis HOM05D003726 ORTHO05D003520 7.0e-18 95.9 441 28.3
Gorai.006G183100 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.6e-17 94.7 379 30.1
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 2.0e-17 94.4 123 43.1
Eucgr.A00522 Eucalyptus grandis HOM05D003726 ORTHO05D003520 3.5e-17 93.6 129 41.1
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 4.5e-17 93.2 195 34.9
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 5.9e-17 92.8 373 30.0
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 1.3e-16 91.7 424 26.7
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 1.7e-16 91.3 212 33.5
Gohir.D09G161366 Gossypium hirsutum HOM05D003726 ORTHO05D003520 2.9e-16 90.5 362 28.7
Phvul.010G076500 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 5.0e-16 89.7 422 28.2
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 8.5e-16 89.0 117 43.6
Lalb_Chr07g0193641 Lupinus albus HOM05D003726 ORTHO05D003520 1.5e-15 88.2 396 28.0
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.9e-15 87.8 417 26.4
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 5.5e-15 86.3 125 40.8
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 5.5e-15 86.3 417 26.4
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 5.5e-15 86.3 431 26.5
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 7.2e-15 85.9 125 40.8
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 7.2e-15 85.9 415 25.5
FAN14G4204 Fragaria x ananassa HOM05D003726 ORTHO05D003520 9.4e-15 85.5 238 34.0
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.2e-14 85.1 413 26.6
PSO339G6116 Papaver somniferum HOM05D003726 ORTHO05D003520 1.6e-14 84.7 369 27.1
TPR.G13333 Trifolium pratense HOM05D003726 ORTHO05D003520 1.6e-14 84.7 401 25.4
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 2.7e-14 84.0 419 26.3
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 3.6e-14 83.6 403 26.8
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 3.6e-14 83.6 403 27.3
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 4.7e-14 83.2 409 26.7
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 6.1e-14 82.8 356 27.2
PGR031G0398 Punica granatum HOM05D003726 ORTHO05D003520 1.8e-13 81.3 246 30.9
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 2.3e-13 80.9 211 30.8
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 4.0e-13 80.1 189 30.2
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 5.2e-13 79.7 400 26.5
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 1.5e-12 78.2 275 29.8
VMungo0331G0804 Vigna mungo HOM05D003726 ORTHO05D003520 1.5e-12 78.2 290 32.1
EL10Ac5g12551 Beta vulgaris HOM05D029928 ORTHO05D003520 2.0e-12 77.8 385 26.8
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.3e-12 77.0 375 28.5
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 5.7e-12 76.3 401 25.9
AUR62030799 Chenopodium quinoa HOM05D029928 ORTHO05D003520 7.5e-12 75.9 241 30.3
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 7.5e-12 75.9 403 26.6
Atru.chr3.4198 Acer truncatum HOM05D003726 ORTHO05D003520 1.3e-11 75.1 118 40.7
Eucgr.B02248 Eucalyptus grandis HOM05D003726 ORTHO05D003520 1.3e-11 75.1 376 26.3
Glyma.03G056800 Glycine max HOM05D003726 ORTHO05D003520 1.7e-11 74.7 434 27.0
THA.LOC104816197 Tarenaya hassleriana HOM05D013727 ORTHO05D003520 1.7e-11 74.7 410 27.8
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.2e-11 74.3 374 28.9
Lalb_Chr12g0207011 Lupinus albus HOM05D003726 ORTHO05D003520 3.7e-11 73.6 130 42.3
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 4.8e-11 73.2 399 25.3
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 8.2e-11 72.4 133 38.3
CSS0025538 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.4e-10 71.6 340 27.6
Medtr4g015650 Medicago truncatula HOM05D003726 ORTHO05D003520 1.4e-10 71.6 410 25.6
Lalb_Chr04g0252221 Lupinus albus HOM05D003726 ORTHO05D003520 1.8e-10 71.2 129 38.0
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 1.8e-10 71.2 125 36.0
CSS0029870 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.4e-10 70.9 340 27.6
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 2.4e-10 70.9 378 27.0
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 3.1e-10 70.5 408 27.9
PGR102G0699 Punica granatum HOM05D003726 ORTHO05D003520 3.1e-10 70.5 123 39.0
Sc07g0006660 Simmondsia chinensis HOM05D003726 ORTHO05D003520 3.1e-10 70.5 382 24.6
arahy.Tifrunner.gnm1.ann1.3NQ7J1 Arachis hypogaea HOM05D003726 ORTHO05D003520 4.1e-10 70.1 417 25.7
arahy.Tifrunner.gnm1.ann1.DIZ6KI Arachis hypogaea HOM05D003726 ORTHO05D003520 4.1e-10 70.1 417 25.7
Hund11000 Selenicereus undatus HOM05D046068 ORTHO05D003520 5.3e-10 69.7 201 31.8
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 7.0e-10 69.3 397 28.0
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 1.2e-09 68.6 408 24.8
Cc01_g14320 Coffea canephora HOM05D003726 ORTHO05D003520 1.6e-09 68.2 301 28.2
Psat7g245680 Pisum sativum HOM05D003726 ORTHO05D003520 1.6e-09 68.2 395 27.1
AUR62020147 Chenopodium quinoa HOM05D003726 ORTHO05D003520 2.0e-09 67.8 390 27.4
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.0e-09 67.8 372 27.7
Nitab4.5_0008578g0030 Nicotiana tabacum HOM05D003726 ORTHO05D003520 2.0e-09 67.8 184 31.5
Dinv01729 Davidia involucrata HOM05D003726 ORTHO05D003520 2.7e-09 67.4 198 32.8
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 2.7e-09 67.4 338 28.4
Glyma.01G120800 Glycine max HOM05D003726 ORTHO05D003520 3.5e-09 67.0 430 26.3
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 3.5e-09 67.0 406 25.9
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 7.7e-09 65.9 384 24.7
Phvul.008G098200 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 7.7e-09 65.9 350 28.0
Psat5g158000 Pisum sativum HOM05D003726 ORTHO05D003520 7.7e-09 65.9 128 35.2
Sed0002259 Sechium edule HOM05D003726 ORTHO05D003520 7.7e-09 65.9 380 25.0
Hund29902 Selenicereus undatus HOM05D046068 ORTHO05D003520 1.0e-08 65.5 201 30.8
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 1.3e-08 65.1 124 33.9
AUR62001632 Chenopodium quinoa HOM05D003726 ORTHO05D003520 1.7e-08 64.7 185 32.4
arahy.Tifrunner.gnm1.ann1.P4YYRQ Arachis hypogaea HOM05D003726 ORTHO05D003520 2.2e-08 64.3 393 26.0
Sed0010018 Sechium edule HOM05D003726 ORTHO05D003520 3.8e-08 63.5 363 24.0
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 5.0e-08 63.2 399 27.1
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 6.5e-08 62.8 384 26.3
FvH4_3g38760 Fragaria vesca HOM05D003726 ORTHO05D003520 8.5e-08 62.4 368 26.9
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 8.5e-08 62.4 399 24.1
arahy.Tifrunner.gnm1.ann1.IE2B4C Arachis hypogaea HOM05D003726 ORTHO05D003520 1.1e-07 62.0 403 25.3
Aa31LG1G23030 Aethionema arabicum HOM05D013727 ORTHO05D003520 1.5e-07 61.6 408 25.0
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 1.5e-07 61.6 261 28.7
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.9e-07 61.2 399 26.6
Hund20990 Selenicereus undatus HOM05D003726 ORTHO05D003520 1.9e-07 61.2 411 23.4
VMungo1383G2513 Vigna mungo HOM05D003726 ORTHO05D003520 1.9e-07 61.2 415 25.1
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 4.2e-07 60.1 395 23.3
BcaC04g19824 Brassica carinata HOM05D011448 ORTHO05D003520 4.2e-07 60.1 375 27.2
BolC9t57921H Brassica oleracea HOM05D011448 ORTHO05D003520 4.2e-07 60.1 375 27.2
FAN11G0812 Fragaria x ananassa HOM05D003726 ORTHO05D003520 4.2e-07 60.1 368 26.6
Glyma.07G151200 Glycine max HOM05D003726 ORTHO05D003520 4.2e-07 60.1 425 24.2
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 4.2e-07 60.1 419 25.5
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 5.5e-07 59.7 408 24.8
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 7.2e-07 59.3 405 27.2
Thhalv10016075m.g Eutrema salsugineum HOM05D013727 ORTHO05D003520 7.2e-07 59.3 422 25.1
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 7.2e-07 59.3 335 27.8
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 1.2e-06 58.5 413 24.0
BraA02t04692Z Brassica rapa HOM05D013727 ORTHO05D003520 1.6e-06 58.2 134 35.8
Glyma.18G202500 Glycine max HOM05D003726 ORTHO05D003520 1.6e-06 58.2 412 23.8
arahy.Tifrunner.gnm1.ann1.71KX3G Arachis hypogaea HOM05D003726 ORTHO05D003520 2.1e-06 57.8 117 34.2
CARHR211750 Cardamine hirsuta HOM05D013727 ORTHO05D003520 2.7e-06 57.4 143 32.9
THA.LOC104810708 Tarenaya hassleriana HOM05D003726 ORTHO05D003520 3.6e-06 57.0 388 25.0
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 4.7e-06 56.6 424 23.8
CARHR272490 Cardamine hirsuta HOM05D011448 ORTHO05D003520 6.1e-06 56.2 374 23.8
arahy.Tifrunner.gnm1.ann1.142K7L Arachis hypogaea HOM05D003726 ORTHO05D003520 8.0e-06 55.8 117 33.3
Ca_14944_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 8.0e-06 55.8 113 37.2


User provided reference genes

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