Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 4.7e-161 571.2 310 100.0
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 5.6e-122 441.4 265 87.2
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 1.3e-121 440.3 265 87.2
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 3.7e-121 438.7 265 87.9
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 6.2e-121 438.0 264 87.9
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 1.8e-120 436.4 265 86.8
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 5.3e-120 434.9 271 84.5
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 1.5e-119 433.3 265 86.0
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 2.0e-119 433.0 265 86.4
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 2.6e-119 432.6 266 85.7
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 3.4e-119 432.2 265 84.9
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 7.6e-119 431.0 265 85.7
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 7.6e-119 431.0 265 85.3
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 7.6e-119 431.0 266 85.3
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 7.6e-119 431.0 265 86.4
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 9.9e-119 430.6 265 85.3
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 9.9e-119 430.6 265 87.2
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 1.7e-118 429.9 265 87.2
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 4.9e-118 428.3 265 84.9
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 6.4e-118 427.9 265 84.9
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 6.4e-118 427.9 265 84.5
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 6.4e-118 427.9 265 85.3
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 8.4e-118 427.6 265 84.9
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 8.4e-118 427.6 265 85.3
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.1e-117 427.2 264 85.2
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 1.4e-117 426.8 265 85.3
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 1.9e-117 426.4 261 86.2
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 1.9e-117 426.4 264 84.8
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.2e-117 425.6 265 84.2
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 3.2e-117 425.6 265 84.9
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 3.2e-117 425.6 262 87.4
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 3.2e-117 425.6 265 84.9
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 4.2e-117 425.2 265 83.8
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 5.5e-117 424.9 265 84.9
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 5.5e-117 424.9 265 84.5
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 7.1e-117 424.5 265 86.0
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.2e-116 423.7 265 83.4
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 2.1e-116 422.9 265 83.4
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 4.6e-116 421.8 266 83.8
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 6.0e-116 421.4 261 85.1
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 3.0e-115 419.1 265 83.4
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 3.9e-115 418.7 259 84.2
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 6.7e-115 417.9 259 84.2
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 8.7e-115 417.5 259 84.2
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 8.7e-115 417.5 264 83.0
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 1.1e-114 417.2 262 83.2
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 1.1e-114 417.2 284 78.9
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 1.1e-114 417.2 261 83.1
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 2.5e-114 416.0 278 81.7
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 2.5e-114 416.0 276 80.4
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 2.5e-114 416.0 279 78.5
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 4.3e-114 415.2 264 82.6
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 5.6e-114 414.8 259 83.8
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 5.6e-114 414.8 259 83.8
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 1.6e-113 413.3 255 85.1
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 1.6e-113 413.3 262 82.8
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 2.1e-113 412.9 264 81.8
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 2.1e-113 412.9 265 83.4
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 2.8e-113 412.5 262 84.0
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 2.8e-113 412.5 261 82.8
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 4.8e-113 411.8 261 83.1
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 4.8e-113 411.8 262 82.4
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 6.2e-113 411.4 263 82.9
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 8.2e-113 411.0 261 81.6
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 1.1e-112 410.6 264 81.4
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 1.1e-112 410.6 261 83.5
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 1.8e-112 409.8 262 82.4
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 2.4e-112 409.5 261 83.1
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 3.1e-112 409.1 261 82.4
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 3.1e-112 409.1 261 82.8
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 4.0e-112 408.7 261 84.7
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 4.0e-112 408.7 262 83.2
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 5.3e-112 408.3 261 82.8
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 5.3e-112 408.3 264 83.7
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 6.9e-112 407.9 260 82.7
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 6.9e-112 407.9 260 82.7
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 1.5e-111 406.8 253 84.2
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 2.0e-111 406.4 262 81.7
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 2.0e-111 406.4 262 82.4
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 2.6e-111 406.0 253 85.4
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 3.4e-111 405.6 262 82.1
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 2.2e-110 402.9 252 84.9
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.1e-109 400.6 265 79.6
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 1.4e-109 400.2 265 81.1
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 1.9e-109 399.8 262 80.2
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 3.2e-109 399.1 264 80.7
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 5.5e-109 398.3 261 81.2
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 9.3e-109 397.5 253 83.4
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 2.7e-108 396.0 241 87.1
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 6.0e-108 394.8 262 79.8
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 6.0e-108 394.8 289 77.2
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 1.8e-107 393.3 250 83.2
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 3.0e-107 392.5 264 79.5
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 6.7e-107 391.3 287 75.3
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 8.7e-107 391.0 253 82.2
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 8.7e-107 391.0 262 77.1
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 1.3e-105 387.1 257 80.2
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 2.2e-105 386.3 225 89.8
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 2.8e-105 386.0 256 79.3
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 1.4e-104 383.6 257 79.4
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 3.1e-104 382.5 266 74.8
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 9.0e-104 380.9 257 78.6
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 4.5e-103 378.6 225 88.9
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.3e-102 377.1 252 78.2
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.1e-101 374.0 261 73.2
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 7.2e-101 371.3 238 82.8
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 4.6e-100 368.6 260 75.8
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 1.3e-97 360.5 257 73.5
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 2.4e-96 356.3 263 71.1
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 5.9e-95 351.7 261 69.0
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 1.3e-94 350.5 265 74.7
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 1.2e-92 344.0 265 72.5
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 2.0e-90 336.7 253 70.0
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 6.3e-89 331.6 256 67.2
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 1.0e-86 324.3 187 90.4
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 7.2e-85 318.2 252 68.3
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.3e-67 260.0 179 74.9
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 7.5e-66 255.0 255 53.3
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 4.8e-65 252.3 265 57.7
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 2.4e-64 250.0 151 86.8
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 2.9e-62 243.0 161 80.1
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 4.7e-60 235.7 154 83.1
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 8.3e-49 198.4 249 43.4
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.1e-48 198.0 265 49.8
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 1.5e-45 187.6 250 41.6
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.6e-39 167.5 257 38.9
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 2.3e-35 153.7 98 78.6
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 8.9e-35 151.8 96 82.3
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.9e-32 144.1 240 36.7
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.0e-30 138.3 77 90.9
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 8.6e-30 135.2 119 64.7
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 3.6e-28 129.8 75 86.7
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 1.4e-24 117.9 239 35.6
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 8.7e-22 108.6 96 61.5
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 1.8e-11 74.3 75 58.7


User provided reference genes

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