Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.26548 Avicennia marina HOM05D003811 ORTHO05D004470 3.7e-188 661.4 335 100.0
Migut.L01879 Erythranthe guttata HOM05D003811 ORTHO05D004470 2.4e-86 323.2 346 56.4
Oeu018819.1 Olea europaea HOM05D003811 ORTHO05D004470 2.3e-84 316.6 354 52.8
Oeu006847.1 Olea europaea HOM05D003811 ORTHO05D004470 5.0e-84 315.5 351 55.8
MSTRG.10438 Avicennia marina HOM05D003811 ORTHO05D004470 1.2e-82 310.8 345 57.1
Nitab4.5_0000949g0020 Nicotiana tabacum HOM05D003811 ORTHO05D004470 3.2e-78 296.2 359 51.0
Cc06_g20840 Coffea canephora HOM05D003811 ORTHO05D004470 9.2e-78 294.7 382 50.0
Migut.J00797 Erythranthe guttata HOM05D003811 ORTHO05D004470 2.0e-77 293.5 357 54.6
Nitab4.5_0000491g0080 Nicotiana tabacum HOM05D003811 ORTHO05D004470 4.6e-77 292.4 351 51.3
CAN.G192.5 Capsicum annuum HOM05D003811 ORTHO05D004470 1.0e-76 291.2 365 51.8
Peaxi162Scf01038g00011 Petunia axillaris HOM05D003811 ORTHO05D004470 1.1e-75 287.7 360 50.3
Nitab4.5_0000949g0010 Nicotiana tabacum HOM05D003811 ORTHO05D004470 5.6e-75 285.4 360 50.0
PGSC0003DMG400022983 Solanum tuberosum HOM05D003811 ORTHO05D004470 7.3e-75 285.0 369 51.2
Oeu019552.1 Olea europaea HOM05D003811 ORTHO05D004470 2.8e-74 283.1 354 50.6
Sopen07g004460 Solanum pennellii HOM05D003811 ORTHO05D004470 2.9e-71 273.1 368 49.2
Oeu034800.1 Olea europaea HOM05D003811 ORTHO05D004470 3.2e-70 269.6 346 50.0
Solyc07g008540.3 Solanum lycopersicum HOM05D003811 ORTHO05D004470 9.2e-70 268.1 369 49.3
Cfa013454 Carpinus fangiana HOM05D003811 ORTHO05D004470 1.2e-66 257.7 351 48.7
DCAR_018030 Daucus carota HOM05D003811 ORTHO05D004470 1.2e-66 257.7 350 48.3
vmacro05996 Vaccinium macrocarpon HOM05D003811 ORTHO05D004470 1.3e-63 247.7 355 44.5
Duzib168G0111 Durio zibethinus HOM05D003811 ORTHO05D004470 3.2e-62 243.0 364 44.8
Dinv25445 Davidia involucrata HOM05D003811 ORTHO05D004470 4.1e-62 242.7 347 48.1
Rhsim03G0266200 Rhododendron simsii HOM05D003811 ORTHO05D004470 5.4e-62 242.3 357 43.7
CiPaw.07G197300 Carya illinoinensis HOM05D003811 ORTHO05D004470 2.1e-61 240.4 354 44.6
CSS0000053 Camellia sinensis var. sinensis HOM05D003811 ORTHO05D004470 3.5e-61 239.6 358 46.1
TAR620G0001 Trochodendron aralioides HOM05D003811 ORTHO05D004470 3.9e-60 236.1 346 46.5
ClCG11G011760 Citrullus lanatus HOM05D003811 ORTHO05D004470 6.6e-60 235.3 364 44.0
Lj5C615T3 Lonicera japonica HOM05D003811 ORTHO05D004470 1.5e-59 234.2 369 43.6
DCAR_014667 Daucus carota HOM05D003811 ORTHO05D004470 9.6e-59 231.5 332 46.1
Thecc.09G186300 Theobroma cacao HOM05D003811 ORTHO05D004470 1.6e-58 230.7 359 43.7
SalBow5G0957 Salvia bowleyana HOM05D003811 ORTHO05D004470 2.8e-58 229.9 338 48.8
MELO3C003975.2 Cucumis melo HOM05D003811 ORTHO05D004470 4.7e-58 229.2 373 43.2
Lj5C612T1 Lonicera japonica HOM05D003811 ORTHO05D004470 1.8e-57 227.3 351 43.9
SalBow5G4432 Salvia bowleyana HOM05D003811 ORTHO05D004470 2.4e-57 226.9 342 48.2
TWI63G0214 Tripterygium wilfordii HOM05D003811 ORTHO05D004470 1.2e-56 224.6 349 44.1
CsaV3_2G008720 Cucumis sativus L. HOM05D003811 ORTHO05D004470 2.0e-56 223.8 373 42.4
FAN22G1182 Fragaria x ananassa HOM05D003811 ORTHO05D004470 4.4e-56 222.6 369 44.4
RcHm_v2.0_Chr4g0399481 Rosa chinensis HOM05D003811 ORTHO05D004470 7.6e-56 221.9 369 44.4
Ciclev10008308m.g Citrus clementina HOM05D003811 ORTHO05D004470 1.3e-55 221.1 370 43.0
Manes.06G019300 Manihot esculenta HOM05D003811 ORTHO05D004470 1.3e-55 221.1 360 43.6
FAN17G0360 Fragaria x ananassa HOM05D003811 ORTHO05D004470 3.8e-55 219.5 369 43.6
FvH4_4g07270 Fragaria vesca HOM05D003811 ORTHO05D004470 6.4e-55 218.8 367 43.1
FAN12G0553 Fragaria x ananassa HOM05D003811 ORTHO05D004470 6.4e-55 218.8 368 43.5
Lsat_1_v5_gn_7_56240 Lactuca sativa HOM05D003811 ORTHO05D004470 7.1e-54 215.3 356 42.1
Ah.10g036890 Amaranthus hybridus HOM05D003811 ORTHO05D004470 6.0e-53 212.2 361 44.0
Aqoxy7G02811 Aquilegia oxysepala HOM05D003811 ORTHO05D004470 1.3e-52 211.1 358 43.6
Cpa.g.sc95.8 Carica papaya HOM05D003811 ORTHO05D004470 3.0e-52 209.9 374 40.9
FAN07G1538 Fragaria x ananassa HOM05D003811 ORTHO05D004470 3.0e-52 209.9 370 43.0
Glyma.13G100700 Glycine max HOM05D003811 ORTHO05D004470 3.0e-52 209.9 354 42.1
unitig_8.g4051 Utricularia gibba HOM05D003811 ORTHO05D004470 8.7e-52 208.4 289 46.7
Duzib150G1212 Durio zibethinus HOM05D003811 ORTHO05D004470 1.5e-51 207.6 359 42.1
Hund13780 Selenicereus undatus HOM05D003811 ORTHO05D004470 1.5e-51 207.6 359 42.6
MD13G1239300 Malus domestica HOM05D003811 ORTHO05D004470 3.3e-51 206.5 374 42.5
Ca_27932_v3 Cicer arietinum L. HOM05D003811 ORTHO05D004470 4.3e-51 206.1 370 42.2
Eucgr.C00112 Eucalyptus grandis HOM05D003811 ORTHO05D004470 5.6e-51 205.7 354 43.5
Sed0004951 Sechium edule HOM05D003811 ORTHO05D004470 5.6e-51 205.7 355 41.7
TWI34G1601 Tripterygium wilfordii HOM05D003811 ORTHO05D004470 7.3e-51 205.3 342 42.1
GSVIVG01010855001 Vitis vinifera HOM05D003811 ORTHO05D004470 2.1e-50 203.8 334 42.5
Ah.16g102470 Amaranthus hybridus HOM05D003811 ORTHO05D008019 2.8e-50 203.4 371 42.3
Hma1.2p1_1326F.1_g275850 Hydrangea macrophylla HOM05D003811 ORTHO05D004470 3.6e-50 203.0 342 41.8
vmacro20813 Vaccinium macrocarpon HOM05D003832 ORTHO05D004365 8.1e-50 201.8 349 41.0
Sc10g0001710 Simmondsia chinensis HOM05D003811 ORTHO05D004470 1.1e-49 201.4 348 43.7
unitig_22.g5159 Utricularia gibba HOM05D003811 ORTHO05D004470 1.1e-49 201.4 276 47.5
EL10Ac2g04726 Beta vulgaris HOM05D003811 ORTHO05D004470 9.0e-49 198.4 373 42.9
MBI13_g34046_MAGBIO Magnolia biondii HOM05D003811 ORTHO05D004470 1.2e-48 198.0 331 43.5
Sed0025374 Sechium edule HOM05D003811 ORTHO05D004470 1.5e-48 197.6 340 42.1
HanXRQChr03g0065501 Helianthus annuus HOM05D003811 ORTHO05D004470 4.5e-48 196.1 427 37.7
FAN02G0923 Fragaria x ananassa HOM05D003811 ORTHO05D004470 5.8e-48 195.7 367 40.1
Lsat_1_v5_gn_5_83141 Lactuca sativa HOM05D003811 ORTHO05D004470 5.8e-48 195.7 349 43.8
VMungo1215G0314 Vigna mungo HOM05D003811 ORTHO05D004470 1.7e-47 194.1 352 42.0
MD16G1248400 Malus domestica HOM05D003811 ORTHO05D004470 2.2e-47 193.7 370 40.5
Atru.chr7.754 Acer truncatum HOM05D003811 ORTHO05D004470 2.9e-47 193.4 339 42.5
Atru.chr7.775 Acer truncatum HOM05D003811 ORTHO05D004470 2.9e-47 193.4 339 42.5
Glyma.17G059100 Glycine max HOM05D003811 ORTHO05D004470 3.8e-47 193.0 354 40.1
Nn8g40778 Nelumbo nucifera HOM05D003811 ORTHO05D004470 3.8e-47 193.0 347 40.9
Hund16072 Selenicereus undatus HOM05D003811 ORTHO05D004470 1.1e-46 191.4 387 41.9
SGA_v2.0_scaffold511G52626 Striga asiatica HOM05D003811 ORTHO05D004470 1.1e-46 191.4 329 41.6
Psat4g013600 Pisum sativum HOM05D003811 ORTHO05D004470 1.4e-46 191.0 360 41.9
AUR62012114 Chenopodium quinoa HOM05D003811 ORTHO05D004470 1.9e-46 190.7 361 41.3
Sabra18G0116100 Salix brachista HOM05D003811 ORTHO05D004470 3.2e-46 189.9 367 39.2
HanXRQChr09g0245431 Helianthus annuus HOM05D003811 ORTHO05D004470 1.2e-45 188.0 404 37.4
HanXRQChr10g0308851 Helianthus annuus HOM05D003811 ORTHO05D004470 2.1e-45 187.2 358 41.1
Lsat_1_v5_gn_8_69001 Lactuca sativa HOM05D003811 ORTHO05D004470 2.7e-45 186.8 345 43.2
Lalb_Chr07g0180651 Lupinus albus HOM05D003811 ORTHO05D004470 3.5e-45 186.4 345 42.3
AUR62040721 Chenopodium quinoa HOM05D003811 ORTHO05D004470 7.9e-45 185.3 356 41.0
Rhsim01G0116800 Rhododendron simsii HOM05D003811 ORTHO05D004470 7.9e-45 185.3 349 38.4
arahy.Tifrunner.gnm1.ann1.0QJD35 Arachis hypogaea HOM05D003811 ORTHO05D004470 1.0e-44 184.9 363 40.8
Manes.14G159300 Manihot esculenta HOM05D003811 ORTHO05D004470 3.0e-44 183.3 350 40.6
Potri.006G075200 Populus trichocarpa HOM05D003811 ORTHO05D004470 3.9e-44 183.0 392 38.5
Lj4g0014027 Lotus japonicus HOM05D003811 ORTHO05D004470 6.7e-44 182.2 356 41.0
arahy.Tifrunner.gnm1.ann1.YRC4PH Arachis hypogaea HOM05D003811 ORTHO05D004470 1.9e-43 180.6 363 40.2
FvH4_6g24780 Fragaria vesca HOM05D003811 ORTHO05D004470 1.9e-43 180.6 356 38.5
Lalb_Chr13g0299991 Lupinus albus HOM05D003811 ORTHO05D004470 1.9e-43 180.6 354 41.0
TPR.G32975 Trifolium pratense HOM05D003811 ORTHO05D004470 1.9e-43 180.6 368 40.5
Medtr4g127420 Medicago truncatula HOM05D003811 ORTHO05D004470 5.6e-43 179.1 361 40.7
Dinv41179 Davidia involucrata HOM05D003811 ORTHO05D004470 2.1e-42 177.2 344 40.7
Potri.018G142100 Populus trichocarpa HOM05D003811 ORTHO05D004470 4.8e-42 176.0 407 34.9
ECA240G2391 Erigeron canadensis HOM05D003811 ORTHO05D004470 1.1e-41 174.9 361 39.3
Prupe.1G074900 Prunus persica HOM05D003811 ORTHO05D004470 2.4e-41 173.7 381 36.2
Sabra06G0055900 Salix brachista HOM05D003811 ORTHO05D004470 2.4e-41 173.7 384 37.5
Eucgr.C02219 Eucalyptus grandis HOM05D003811 ORTHO05D004470 2.6e-40 170.2 356 37.9
SGA_v2.0_scaffold31G12764 Striga asiatica HOM05D003811 ORTHO05D004470 2.6e-40 170.2 368 41.0
Lalb_Chr12g0199621 Lupinus albus HOM05D003811 ORTHO05D004470 2.2e-39 167.2 340 38.8
QL02p046940 Quercus lobata HOM05D003811 ORTHO05D004470 8.4e-39 165.2 370 36.8
Phvul.003G141200 Phaseolus vulgaris HOM05D003811 ORTHO05D004470 5.5e-38 162.5 347 38.3
Thhalv10013517m.g Eutrema salsugineum HOM05D003811 ORTHO05D004470 9.3e-38 161.8 387 36.2
MBI16_g05834_MAGBIO Magnolia biondii HOM05D003811 ORTHO05D004470 2.1e-37 160.6 353 37.4
PGR001G0001 Punica granatum HOM05D003811 ORTHO05D004470 2.3e-36 157.1 343 37.6
HanXRQChr05g0141071 Helianthus annuus HOM05D003811 ORTHO05D004470 2.5e-35 153.7 329 37.1
CDE06G2566 Ceratophyllum demersum HOM05D003811 ORTHO05D004470 1.6e-34 151.0 338 35.5
Sp6g18910 Schrenkiella parvula HOM05D003811 ORTHO05D004470 1.6e-34 151.0 388 35.1
Aa31LG3G13080 Aethionema arabicum HOM05D003811 ORTHO05D004470 6.2e-34 149.1 398 34.9
PSO170G1122 Papaver somniferum HOM05D003811 ORTHO05D004470 6.2e-34 149.1 363 37.7
PSO063G0992 Papaver somniferum HOM05D003811 ORTHO05D004470 8.2e-34 148.7 351 38.2
BolC9t57752H Brassica oleracea HOM05D003811 ORTHO05D004470 1.1e-33 148.3 317 38.2
Actinidia38496 Actinidia chinensis HOM05D003811 ORTHO05D004470 2.4e-33 147.1 180 49.4
BcaC04g19992 Brassica carinata HOM05D003811 ORTHO05D004470 5.3e-33 146.0 314 37.9
C09p49010 Brassica napus HOM05D003811 ORTHO05D004470 1.2e-32 144.8 314 37.6
C01p21610 Brassica napus HOM05D003811 ORTHO05D004470 4.9e-31 139.4 346 36.7
BolC1t02080H Brassica oleracea HOM05D003811 ORTHO05D004470 4.9e-31 139.4 346 36.7
Gohir.A05G002200 Gossypium hirsutum HOM05D003811 ORTHO05D004470 4.9e-31 139.4 348 35.9
BcaB08g36076 Brassica carinata HOM05D003811 ORTHO05D004470 6.5e-31 139.0 320 36.6
COL.COLO4_07099 Corchorus olitorius HOM05D003811 ORTHO05D004470 6.5e-31 139.0 361 32.7
A02p08670 Brassica napus HOM05D003811 ORTHO05D004470 8.4e-31 138.7 344 36.6
SGA_v2.0_scaffold112G31580 Striga asiatica HOM05D003811 ORTHO05D004470 8.4e-31 138.7 266 42.1
Thhalv10025322m.g Eutrema salsugineum HOM05D003811 ORTHO05D004470 1.1e-30 138.3 356 35.4
BcaB05g22326 Brassica carinata HOM05D003811 ORTHO05D004470 1.4e-30 137.9 366 34.7
Gohir.D05G002600 Gossypium hirsutum HOM05D003811 ORTHO05D004470 1.9e-30 137.5 348 34.5
A10p14570 Brassica napus HOM05D003811 ORTHO05D004470 2.5e-30 137.1 313 36.7
BraA02t05937Z Brassica rapa HOM05D003811 ORTHO05D004470 3.2e-30 136.7 348 37.1
AL7G27010 Arabidopsis lyrata HOM05D003811 ORTHO05D004470 5.5e-30 136.0 349 34.7
BcaC09g50723 Brassica carinata HOM05D003811 ORTHO05D004470 5.5e-30 136.0 346 36.4
CiPaw.08G032400 Carya illinoinensis HOM05D003811 ORTHO05D004470 7.1e-30 135.6 353 31.4
HPP92_010287 Vanilla planifolia HOM05D003811 ORTHO05D004470 6.0e-29 132.5 352 35.2
Gorai.009G002400 Gossypium raimondii HOM05D003811 ORTHO05D004470 1.3e-28 131.3 351 34.2
CARHR270970 Cardamine hirsuta HOM05D003811 ORTHO05D004470 1.8e-28 131.0 396 33.3
BraA10t43544Z Brassica rapa HOM05D003811 ORTHO05D004470 6.7e-28 129.0 318 35.8
BcaC03g14176 Brassica carinata HOM05D003811 ORTHO05D004470 8.7e-28 128.6 343 35.3
C02p14510 Brassica napus HOM05D003811 ORTHO05D004470 8.7e-28 128.6 343 35.3
BolC2t07575H Brassica oleracea HOM05D003811 ORTHO05D004470 8.7e-28 128.6 343 35.3
BolC7t45947H Brassica oleracea HOM05D003811 ORTHO05D004470 1.5e-27 127.9 350 33.7
C07p54590 Brassica napus HOM05D003811 ORTHO05D004470 4.3e-27 126.3 356 34.0
AL8G33110 Arabidopsis lyrata HOM05D003811 ORTHO05D004470 1.6e-26 124.4 377 32.9
BcaC06g32778 Brassica carinata HOM05D003811 ORTHO05D004470 1.6e-26 124.4 345 33.3
BraA03t14705Z Brassica rapa HOM05D003811 ORTHO05D004470 2.2e-26 124.0 341 33.7
BraA01t01681Z Brassica rapa HOM05D003811 ORTHO05D004470 2.8e-26 123.6 339 35.1
Oeu064847.1 Olea europaea HOM05D003811 ORTHO05D004470 2.4e-25 120.6 109 63.3
A01p17250 Brassica napus HOM05D003811 ORTHO05D004470 3.1e-25 120.2 335 35.2
CARHR233500 Cardamine hirsuta HOM05D003811 ORTHO05D004470 3.1e-25 120.2 334 30.5
Carub.0007s1496 Capsella rubella HOM05D003811 ORTHO05D004470 6.9e-25 119.0 353 33.1
Sp7g24010 Schrenkiella parvula HOM05D003811 ORTHO05D004470 6.9e-25 119.0 360 32.8
ECA234G4485 Erigeron canadensis HOM05D003811 ORTHO05D004470 3.4e-24 116.7 194 42.3
FAN05G4809 Fragaria x ananassa HOM05D003811 ORTHO05D004470 3.4e-24 116.7 207 40.6
HPP92_017127 Vanilla planifolia HOM05D003811 ORTHO05D004470 3.4e-24 116.7 358 34.4
Actinidia29953 Actinidia chinensis HOM05D003811 ORTHO05D004470 1.0e-23 115.2 163 44.2
AT5G57180 Arabidopsis thaliana HOM05D003811 ORTHO05D004470 1.0e-23 115.2 384 32.8
Carub.0008s1769 Capsella rubella HOM05D003811 ORTHO05D004470 2.2e-23 114.0 373 33.0
AT4G25990 Arabidopsis thaliana HOM05D003811 ORTHO05D004470 1.1e-22 111.7 354 31.9
BcaNung03775 Brassica carinata HOM05D003811 ORTHO05D004470 3.6e-21 106.7 339 32.7
Psat1g144040 Pisum sativum HOM05D003811 ORTHO05D004470 4.6e-21 106.3 341 35.5
Os02g0148000 Oryza sativa ssp. japonica HOM05D003811 ORTHO05D004470 8.8e-20 102.1 404 29.7
Zm00001eb272980 Zea mays HOM05D018649 ORTHO05D004470 8.8e-20 102.1 386 31.1
ECA236G3708 Erigeron canadensis HOM05D003811 ORTHO05D004470 5.7e-19 99.4 271 33.2
Glyma.09G059800 Glycine max HOM05D003811 ORTHO05D004470 7.4e-19 99.0 351 32.2
Zm00001eb226810 Zea mays HOM05D018649 ORTHO05D004470 7.4e-19 99.0 363 32.2
Phvul.009G236100 Phaseolus vulgaris HOM05D003811 ORTHO05D004470 9.7e-19 98.6 300 30.7
Glyma.15G166500 Glycine max HOM05D003811 ORTHO05D004470 1.7e-18 97.8 318 34.0
A03p56350 Brassica napus HOM05D003811 ORTHO05D004470 1.4e-17 94.7 335 30.1
Zm00001eb208040 Zea mays HOM05D003811 ORTHO05D004470 1.4e-17 94.7 392 30.6
Medtr2g038010 Medicago truncatula HOM05D003811 ORTHO05D004470 2.6e-16 90.5 343 31.5
TPR.G7568 Trifolium pratense HOM05D002228 ORTHO05D002347 4.5e-16 89.7 328 29.9
Ca_02108_v3 Cicer arietinum L. HOM05D003811 ORTHO05D004470 1.0e-15 88.6 338 31.4
Os06g0699600 Oryza sativa ssp. japonica HOM05D003811 ORTHO05D004470 3.8e-15 86.7 400 28.5
FAN05G5342 Fragaria x ananassa HOM05D003811 ORTHO05D004470 8.5e-15 85.5 98 52.0
FAN24G1311 Fragaria x ananassa HOM05D003811 ORTHO05D004470 3.6e-13 80.1 97 45.4
Lsat_1_v5_gn_6_95500 Lactuca sativa HOM05D003811 ORTHO05D004470 1.0e-12 78.6 134 38.8
FvH4_2g01490 Fragaria vesca HOM05D003811 ORTHO05D004470 1.4e-12 78.2 97 44.3
ATR0626G357 Amborella trichopoda HOM05D003811 ORTHO05D004470 1.8e-09 67.8 362 27.1
Lsat_1_v5_gn_5_27801 Lactuca sativa HOM05D003811 ORTHO05D036460 2.9e-07 60.5 94 38.3
Lsat_1_v5_gn_5_45681 Lactuca sativa HOM05D003811 ORTHO05D036460 2.9e-07 60.5 74 41.9
Zm00001eb232250 Zea mays HOM05D003811 ORTHO05D004470 4.2e-06 56.6 188 28.7


User provided reference genes

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