Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 2.1e-200 702.2 368 100.0
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 8.6e-178 627.1 388 85.6
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.5e-177 626.3 369 89.4
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 1.8e-175 619.4 365 89.3
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 1.7e-173 612.8 361 88.4
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 3.3e-169 598.6 364 81.6
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 4.7e-168 594.7 362 85.4
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 3.7e-165 585.1 365 85.2
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 4.9e-165 584.7 362 84.5
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 3.2e-164 582.0 362 84.3
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 2.1e-163 579.3 362 83.7
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 2.1e-163 579.3 373 81.8
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.1e-163 579.3 373 81.8
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.5e-163 578.6 365 84.1
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 6.0e-163 577.8 367 83.9
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 7.8e-163 577.4 362 82.9
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 2.3e-162 575.9 355 83.9
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 6.6e-162 574.3 357 81.2
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 8.6e-162 573.9 355 83.7
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 1.1e-161 573.5 364 81.9
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.5e-161 573.2 367 83.4
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.5e-161 573.2 367 83.1
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 1.6e-160 569.7 358 79.1
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 3.6e-160 568.5 372 80.4
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 3.6e-160 568.5 364 81.9
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 3.6e-160 568.5 360 82.8
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 6.2e-160 567.8 371 81.1
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 8.1e-160 567.4 361 80.9
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 2.4e-159 565.8 361 82.3
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 2.4e-159 565.8 361 82.3
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 5.2e-159 564.7 350 82.3
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 6.8e-159 564.3 362 80.1
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 6.8e-159 564.3 363 78.0
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 6.8e-159 564.3 360 78.1
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 8.9e-159 563.9 357 79.6
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 8.9e-159 563.9 364 81.6
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 7.6e-158 560.8 362 79.6
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 7.6e-158 560.8 360 78.1
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 9.9e-158 560.5 362 79.0
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 1.7e-157 559.7 369 78.9
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 2.2e-157 559.3 362 79.8
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 3.8e-157 558.5 361 76.7
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 4.9e-157 558.1 356 78.1
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 6.4e-157 557.8 362 80.7
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 6.4e-157 557.8 348 79.6
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 6.4e-157 557.8 363 75.8
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 8.4e-157 557.4 367 77.1
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 1.1e-156 557.0 362 78.7
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 2.4e-156 555.8 364 76.4
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 3.2e-156 555.4 361 76.2
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.1e-156 555.1 356 80.9
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 5.4e-156 554.7 363 75.5
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 7.1e-156 554.3 362 78.7
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 7.1e-156 554.3 355 80.6
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 7.1e-156 554.3 366 79.8
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 9.2e-156 553.9 366 79.8
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 9.2e-156 553.9 366 79.8
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 9.2e-156 553.9 355 80.6
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 1.2e-155 553.5 360 79.4
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 1.6e-155 553.1 353 81.6
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 2.7e-155 552.4 370 79.7
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 2.7e-155 552.4 364 76.9
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 3.5e-155 552.0 365 78.9
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 3.5e-155 552.0 363 80.2
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 4.6e-155 551.6 362 79.8
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 4.6e-155 551.6 362 78.7
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 4.6e-155 551.6 368 75.3
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 1.7e-154 549.7 368 79.1
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 1.7e-154 549.7 332 81.6
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 2.3e-154 549.3 362 76.0
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 6.6e-154 547.7 366 79.0
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 8.7e-154 547.4 364 75.8
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.1e-153 547.0 364 79.4
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 1.9e-153 546.2 360 78.6
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 2.5e-153 545.8 369 78.9
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 4.3e-153 545.0 362 79.0
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.2e-152 543.5 364 76.1
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 1.6e-152 543.1 361 79.5
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 3.6e-152 542.0 357 75.6
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 4.7e-152 541.6 366 78.4
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 4.7e-152 541.6 362 75.1
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 4.7e-152 541.6 334 81.7
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 8.1e-152 540.8 357 75.6
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 1.1e-151 540.4 357 75.4
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.8e-151 539.7 375 76.8
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 2.4e-151 539.3 342 77.5
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 1.2e-150 537.0 366 77.9
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 1.2e-150 537.0 366 77.9
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.5e-150 536.6 361 75.1
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 3.4e-150 535.4 363 75.8
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 9.9e-150 533.9 362 77.3
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 1.7e-149 533.1 384 71.1
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 4.9e-149 531.6 359 78.6
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 4.9e-149 531.6 366 75.7
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 8.4e-149 530.8 366 75.4
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.4e-148 530.0 361 77.8
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 3.2e-148 528.9 362 72.9
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.4e-148 528.1 366 75.4
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 3.5e-147 525.4 358 72.3
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 6.0e-147 524.6 329 80.9
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 1.0e-146 523.9 361 72.9
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 3.9e-146 521.9 452 64.6
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 8.7e-146 520.8 368 70.7
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 1.1e-145 520.4 369 71.8
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 1.1e-145 520.4 301 81.7
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 1.1e-145 520.4 361 71.2
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 1.5e-145 520.0 362 76.5
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 1.5e-145 520.0 328 76.5
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 3.3e-145 518.8 362 71.0
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 5.6e-145 518.1 380 74.2
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 7.3e-145 517.7 364 75.8
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 9.6e-145 517.3 358 72.3
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 6.2e-144 514.6 371 69.8
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 6.2e-144 514.6 343 76.1
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 8.1e-144 514.2 361 70.9
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 8.1e-144 514.2 361 70.4
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 1.4e-143 513.5 306 79.4
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 4.0e-143 511.9 363 75.8
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 2.6e-142 509.2 344 73.5
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 7.6e-142 507.7 362 75.4
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 4.2e-140 501.9 346 71.7
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 4.6e-139 498.4 313 76.4
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 1.1e-137 493.8 341 69.2
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 5.6e-137 491.5 362 73.5
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 2.1e-136 489.6 300 78.0
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 3.7e-136 488.8 388 66.8
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.2e-132 475.3 301 82.4
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 1.2e-131 473.8 269 83.3
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 3.5e-131 472.2 344 74.7
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 3.5e-131 472.2 359 70.8
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 8.7e-130 467.6 298 73.2
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 8.7e-130 467.6 297 82.5
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 1.4e-127 460.3 363 69.1
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 1.8e-127 459.9 340 64.1
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 4.5e-126 455.3 310 74.2
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 1.3e-125 453.8 279 77.4
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 8.7e-122 441.0 375 64.3
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 8.7e-122 441.0 322 65.8
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 3.7e-120 435.6 356 59.3
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 9.0e-119 431.0 344 66.9
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 7.6e-118 427.9 356 59.3
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 6.5e-117 424.9 266 77.8
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 2.5e-116 422.9 309 68.6
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 7.2e-116 421.4 299 66.2
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 8.8e-114 414.5 302 65.6
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 5.0e-109 398.7 406 54.2
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 4.2e-108 395.6 347 66.3
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 2.8e-104 382.9 221 84.2
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.7e-101 373.6 225 80.9
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 3.8e-93 345.9 299 55.9
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 1.8e-87 327.0 239 64.0
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 9.8e-81 304.7 238 66.8
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 5.6e-68 262.3 150 83.3
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 3.4e-65 253.1 311 50.8
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 1.7e-61 240.7 169 76.9
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 2.5e-60 236.9 171 65.5
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 1.5e-41 174.5 164 55.5
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 5.3e-34 149.4 96 76.0
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.0e-29 135.2 299 31.4
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 9.6e-28 128.6 100 63.0
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 1.5e-25 121.3 335 28.4
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 3.8e-24 116.7 298 29.2
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 2.4e-23 114.0 235 37.9
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 2.7e-22 110.5 65 76.9
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 2.8e-19 100.5 68 72.1
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 2.8e-19 100.5 68 72.1
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 6.2e-19 99.4 68 72.1
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 1.4e-18 98.2 90 76.7
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.8e-18 97.8 91 75.8
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.2e-17 95.1 380 26.1
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 1.7e-16 91.3 59 74.6
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 8.4e-16 89.0 57 75.4
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 1.8e-10 71.2 108 33.3
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 1.0e-08 65.5 33 84.8
Cpa.g.c48203 Carica papaya HOM05D003970 ORTHO05D004615 6.5e-08 62.8 72 73.6
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 1.4e-07 61.6 41 73.2
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 2.5e-07 60.8 41 70.7
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 4.2e-07 60.1 39 74.4
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 5.5e-07 59.7 35 77.1
HanXRQChr05g0141861 Helianthus annuus HOM05D000001 ORTHO05D009862 7.9e-06 55.8 50 60.0


User provided reference genes

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