Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 1.5e-142 509.6 270 100.0
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 1.1e-62 244.2 244 63.1
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 9.7e-62 241.1 227 63.0
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 3.7e-61 239.2 220 64.1
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 6.3e-61 238.4 227 63.4
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 8.2e-61 238.0 219 63.9
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 1.1e-60 237.7 197 71.1
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 2.4e-60 236.5 221 62.9
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 1.3e-58 230.7 227 62.1
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 3.8e-58 229.2 226 62.8
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 8.5e-58 228.0 235 58.7
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 1.5e-57 227.3 236 58.9
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 2.5e-57 226.5 244 59.4
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 3.2e-57 226.1 239 59.8
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 4.2e-57 225.7 218 61.9
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 5.5e-57 225.3 231 62.8
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 5.5e-57 225.3 237 59.5
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 1.6e-56 223.8 229 61.6
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 1.6e-56 223.8 218 61.5
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 1.6e-56 223.8 227 62.6
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 2.1e-56 223.4 191 68.1
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 2.1e-56 223.4 232 60.3
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 2.7e-56 223.0 227 62.1
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 3.6e-56 222.6 262 57.6
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 3.6e-56 222.6 181 70.7
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 4.7e-56 222.2 225 63.6
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 6.1e-56 221.9 238 60.1
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.0e-55 221.1 241 58.5
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 1.4e-55 220.7 238 60.1
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 2.3e-55 219.9 240 59.6
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 4.0e-55 219.2 241 59.8
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 4.0e-55 219.2 239 59.4
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 5.2e-55 218.8 236 60.2
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 6.8e-55 218.4 238 59.2
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 8.8e-55 218.0 181 70.7
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 1.2e-54 217.6 277 51.6
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 1.5e-54 217.2 234 59.4
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 1.5e-54 217.2 191 66.5
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 1.5e-54 217.2 242 57.9
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 2.0e-54 216.9 243 58.4
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 2.0e-54 216.9 235 60.9
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 2.0e-54 216.9 192 67.7
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 2.6e-54 216.5 181 70.2
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 2.6e-54 216.5 174 69.5
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 2.6e-54 216.5 241 58.1
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 3.4e-54 216.1 235 58.3
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 3.4e-54 216.1 233 58.4
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 4.4e-54 215.7 227 61.7
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 7.5e-54 214.9 236 59.3
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.3e-53 214.2 233 58.8
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 2.8e-53 213.0 228 59.2
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 8.3e-53 211.5 235 56.6
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 8.3e-53 211.5 258 54.3
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.1e-52 211.1 234 57.3
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 1.4e-52 210.7 215 58.6
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 1.4e-52 210.7 231 57.1
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 1.8e-52 210.3 242 56.6
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 2.4e-52 209.9 229 55.9
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 4.1e-52 209.1 227 56.8
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 5.4e-52 208.8 233 60.5
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 5.4e-52 208.8 205 60.5
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 1.2e-51 207.6 219 57.5
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 1.2e-51 207.6 179 64.8
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 1.6e-51 207.2 183 63.9
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 1.6e-51 207.2 221 56.1
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 2.0e-51 206.8 227 59.0
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 3.5e-51 206.1 229 56.8
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 4.5e-51 205.7 217 57.6
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 7.7e-51 204.9 206 58.3
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 1.0e-50 204.5 226 57.1
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 1.0e-50 204.5 220 56.4
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 3.8e-50 202.6 221 55.2
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 3.8e-50 202.6 232 56.5
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 8.5e-50 201.4 221 54.8
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 8.5e-50 201.4 224 58.0
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 1.9e-49 200.3 222 55.4
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 1.9e-49 200.3 230 56.1
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 4.2e-49 199.1 230 54.8
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 1.2e-48 197.6 230 54.8
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.1e-48 196.8 149 74.5
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 6.1e-48 195.3 216 57.4
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 8.0e-48 194.9 269 52.4
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.0e-47 194.5 191 61.8
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 1.8e-47 193.7 225 58.2
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 3.0e-47 193.0 241 53.5
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 2.6e-46 189.9 147 72.1
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 2.6e-46 189.9 195 59.0
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 5.7e-46 188.7 180 61.7
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.3e-45 187.6 147 70.1
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.2e-45 186.8 219 54.8
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 2.8e-45 186.4 174 59.8
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 4.9e-45 185.7 222 54.5
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 6.3e-45 185.3 219 54.3
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 6.3e-45 185.3 215 55.3
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 8.3e-45 184.9 223 53.4
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 8.3e-45 184.9 223 52.9
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.8e-44 183.7 169 63.9
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 7.0e-44 181.8 232 53.9
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 9.1e-44 181.4 150 66.7
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 9.1e-44 181.4 181 58.6
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 3.5e-43 179.5 150 66.0
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 4.5e-43 179.1 174 58.6
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 2.3e-42 176.8 134 70.9
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 5.0e-42 175.6 165 61.8
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 2.8e-40 169.9 173 57.8
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 1.4e-39 167.5 154 68.8
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 1.4e-39 167.5 167 61.1
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 3.6e-32 142.9 140 60.0
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.5e-30 137.5 144 54.2
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 2.6e-30 136.7 177 52.5
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 3.4e-30 136.3 181 44.2
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 1.3e-29 134.4 128 60.2
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 4.9e-29 132.5 128 59.4
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.9e-28 130.6 201 49.8
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 3.2e-28 129.8 136 57.4
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 1.0e-26 124.8 162 51.2
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 1.0e-26 124.8 186 47.8
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 1.7e-26 124.0 180 44.4
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 5.0e-26 122.5 145 47.6
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 8.3e-21 105.1 104 52.9
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 6.6e-18 95.5 106 50.9
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 4.3e-17 92.8 75 65.3
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.1e-15 88.2 105 48.6
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 1.7e-10 70.9 82 52.4
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.1e-07 60.1 117 37.6


User provided reference genes

Program Settings