Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.26303 Avicennia marina HOM05D006364 ORTHO05D007968 1.7e-79 299.3 152 100.0
Migut.B01021 Erythranthe guttata HOM05D006364 ORTHO05D007968 2.8e-42 175.6 91 95.6
Migut.N00017 Erythranthe guttata HOM05D006364 ORTHO05D007968 2.8e-42 175.6 91 95.6
CSS0027206 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 4.5e-40 168.3 91 89.0
Actinidia31587 Actinidia chinensis HOM05D006364 ORTHO05D007968 5.9e-40 167.9 91 90.1
Actinidia02518 Actinidia chinensis HOM05D006364 ORTHO05D007968 1.3e-39 166.8 91 89.0
Dinv15615 Davidia involucrata HOM05D006364 ORTHO05D007968 1.3e-39 166.8 97 83.5
Duzib212G0576 Durio zibethinus HOM05D006364 ORTHO05D007968 1.3e-39 166.8 91 90.1
EL10Ac1g00595 Beta vulgaris HOM05D006364 ORTHO05D007968 1.7e-39 166.4 90 90.0
Nitab4.5_0000152g0370 Nicotiana tabacum HOM05D006364 ORTHO05D007968 2.2e-39 166.0 91 87.9
Nitab4.5_0003130g0060 Nicotiana tabacum HOM05D006364 ORTHO05D007968 2.2e-39 166.0 91 87.9
QL06p013601 Quercus lobata HOM05D006364 ORTHO05D007968 5.0e-39 164.9 91 86.8
Solyc04g071180.3 Solanum lycopersicum HOM05D006364 ORTHO05D007968 6.5e-39 164.5 91 86.8
Sopen04g027130 Solanum pennellii HOM05D006364 ORTHO05D007968 6.5e-39 164.5 91 86.8
PGSC0003DMG400008613 Solanum tuberosum HOM05D006364 ORTHO05D007968 6.5e-39 164.5 91 85.7
Thecc.04G308800 Theobroma cacao HOM05D006364 ORTHO05D007968 6.5e-39 164.5 91 87.9
Peaxi162Scf00126g01328 Petunia axillaris HOM05D006364 ORTHO05D007968 1.1e-38 163.7 91 86.8
CSS0032087 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 1.5e-38 163.3 91 87.9
Gohir.A02G086100 Gossypium hirsutum HOM05D006364 ORTHO05D007968 1.5e-38 163.3 91 87.9
Gohir.D02G062300 Gossypium hirsutum HOM05D006364 ORTHO05D007968 1.5e-38 163.3 91 87.9
Gorai.005G070100 Gossypium raimondii HOM05D006364 ORTHO05D007968 1.5e-38 163.3 91 87.9
Rhsim02G0000900 Rhododendron simsii HOM05D006364 ORTHO05D007968 1.9e-38 162.9 91 84.6
GSVIVG01017645001 Vitis vinifera HOM05D006364 ORTHO05D007968 2.5e-38 162.5 91 85.7
Cc03_g00390 Coffea canephora HOM05D006364 ORTHO05D007968 3.2e-38 162.2 90 85.6
Glyma.15G136600 Glycine max HOM05D006364 ORTHO05D007968 3.2e-38 162.2 90 87.8
Hma1.2p1_0013F.1_g008050 Hydrangea macrophylla HOM05D006364 ORTHO05D007968 4.2e-38 161.8 91 85.7
THA.LOC104820323 Tarenaya hassleriana HOM05D006364 ORTHO05D007968 5.5e-38 161.4 91 85.7
Lj6g0013185 Lotus japonicus HOM05D006364 ORTHO05D007968 7.2e-38 161.0 90 87.8
Nn3g21850 Nelumbo nucifera HOM05D006364 ORTHO05D007968 7.2e-38 161.0 91 84.6
CANSAT78G0762 Cannabis sativa HOM05D006364 ORTHO05D007968 1.2e-37 160.2 91 85.7
Hund19242 Selenicereus undatus HOM05D006364 ORTHO05D007968 1.2e-37 160.2 91 83.5
CAN.G689.14 Capsicum annuum HOM05D006364 ORTHO05D007968 1.6e-37 159.8 91 84.6
Duzib151G1172 Durio zibethinus HOM05D006364 ORTHO05D007968 1.6e-37 159.8 93 84.9
Phvul.006G121400 Phaseolus vulgaris HOM05D006364 ORTHO05D007968 1.6e-37 159.8 90 85.6
COL.COLO4_34533 Corchorus olitorius HOM05D006364 ORTHO05D007968 2.1e-37 159.5 91 85.7
CAN.G175.13 Capsicum annuum HOM05D006364 ORTHO05D007968 2.7e-37 159.1 91 83.5
Cpa.g.sc146.52 Carica papaya HOM05D006364 ORTHO05D007968 2.7e-37 159.1 91 83.5
CiPaw.01G113600 Carya illinoinensis HOM05D006364 ORTHO05D007968 2.7e-37 159.1 90 85.6
Glyma.09G031500 Glycine max HOM05D006364 ORTHO05D007968 2.7e-37 159.1 90 85.6
arahy.Tifrunner.gnm1.ann1.28BCJ9 Arachis hypogaea HOM05D006364 ORTHO05D007968 3.6e-37 158.7 90 85.6
arahy.Tifrunner.gnm1.ann1.8W9CKH Arachis hypogaea HOM05D006364 ORTHO05D007968 3.6e-37 158.7 90 85.6
arahy.Tifrunner.gnm1.ann1.ZVI86Q Arachis hypogaea HOM05D006364 ORTHO05D007968 3.6e-37 158.7 90 85.6
unitig_22.g5765 Utricularia gibba HOM05D006364 ORTHO05D007968 6.1e-37 157.9 91 84.6
Haze_00814 Corylus avellana HOM05D006364 ORTHO05D007968 1.0e-36 157.1 91 84.6
CsaV3_3G015430 Cucumis sativus L. HOM05D006364 ORTHO05D007968 1.0e-36 157.1 91 81.3
Potri.010G152100 Populus trichocarpa HOM05D006364 ORTHO05D007968 1.0e-36 157.1 91 84.6
TWI73G0896 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 1.0e-36 157.1 91 83.5
MELO3C006742.2 Cucumis melo HOM05D006364 ORTHO05D007968 1.4e-36 156.8 99 74.7
Prupe.1G110000 Prunus persica HOM05D006364 ORTHO05D007968 1.4e-36 156.8 90 84.4
HanXRQChr09g0252081 Helianthus annuus HOM05D006364 ORTHO05D007968 1.8e-36 156.4 88 85.2
CDE11G0289 Ceratophyllum demersum HOM05D006364 ORTHO05D007968 2.3e-36 156.0 90 82.2
Lalb_Chr18g0058441 Lupinus albus HOM05D006364 ORTHO05D007968 2.3e-36 156.0 90 84.4
Medtr2g032700 Medicago truncatula HOM05D006364 ORTHO05D007968 3.0e-36 155.6 90 80.0
Psat1g163400 Pisum sativum HOM05D006364 ORTHO05D007968 3.0e-36 155.6 90 82.2
Sed0012877 Sechium edule HOM05D006364 ORTHO05D007968 3.0e-36 155.6 91 81.3
RcHm_v2.0_Chr4g0426541 Rosa chinensis HOM05D006364 ORTHO05D007968 5.2e-36 154.8 90 80.0
Zm00001eb028690 Zea mays HOM05D006364 ORTHO05D007968 1.2e-35 153.7 88 83.0
ECA246G0645 Erigeron canadensis HOM05D006364 ORTHO05D007968 2.0e-35 152.9 88 81.8
Eucgr.H04093 Eucalyptus grandis HOM05D006364 ORTHO05D007968 2.0e-35 152.9 91 79.1
FvH4_4g21000 Fragaria vesca HOM05D006364 ORTHO05D007968 2.0e-35 152.9 116 66.4
FAN12G1354 Fragaria x ananassa HOM05D000037 ORTHO05D001684 2.0e-35 152.9 116 66.4
AUR62014465 Chenopodium quinoa HOM05D000862 ORTHO05D000943 2.6e-35 152.5 84 86.9
Potri.008G100400 Populus trichocarpa HOM05D006364 ORTHO05D007968 3.3e-35 152.1 90 82.2
Lj7E712T1 Lonicera japonica HOM05D006364 ORTHO05D007968 4.4e-35 151.8 86 82.6
MD16G1140400 Malus domestica HOM05D006364 ORTHO05D007968 4.4e-35 151.8 91 79.1
Aa31LG8G4220 Aethionema arabicum HOM05D006364 ORTHO05D007968 5.7e-35 151.4 92 76.1
Zm00001eb418900 Zea mays HOM05D006364 ORTHO05D007968 5.7e-35 151.4 88 81.8
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 7.5e-35 151.0 84 85.7
Sp3g15490 Schrenkiella parvula HOM05D006364 ORTHO05D007968 7.5e-35 151.0 91 79.1
DCAR_026961 Daucus carota HOM05D006364 ORTHO05D007968 1.3e-34 150.2 90 77.8
Os12g0566100 Oryza sativa ssp. japonica HOM05D006364 ORTHO05D007968 1.3e-34 150.2 89 79.8
PGR004G1259 Punica granatum HOM05D006364 ORTHO05D007968 2.8e-34 149.1 91 78.0
TPR.G30811 Trifolium pratense HOM05D006364 ORTHO05D007968 2.8e-34 149.1 90 78.9
Aqoxy2G02602 Aquilegia oxysepala HOM05D006364 ORTHO05D007968 3.7e-34 148.7 92 79.3
HPP92_017027 Vanilla planifolia HOM05D006364 ORTHO05D007968 3.7e-34 148.7 88 78.4
AL3G30350 Arabidopsis lyrata HOM05D006364 ORTHO05D007968 4.8e-34 148.3 91 78.0
AT3G17300 Arabidopsis thaliana HOM05D006364 ORTHO05D007968 4.8e-34 148.3 91 78.0
Carub.0003s1701 Capsella rubella HOM05D006364 ORTHO05D007968 4.8e-34 148.3 91 78.0
BcaB04g18937 Brassica carinata HOM05D006364 ORTHO05D007968 1.1e-33 147.1 91 76.9
BcaB04g20848 Brassica carinata HOM05D006364 ORTHO05D007968 1.1e-33 147.1 91 76.9
A03p40140 Brassica napus HOM05D006364 ORTHO05D007968 1.1e-33 147.1 91 76.9
BraA03t13164Z Brassica rapa HOM05D006364 ORTHO05D007968 1.1e-33 147.1 91 76.9
Thhalv10021841m.g Eutrema salsugineum HOM05D006364 ORTHO05D007968 1.1e-33 147.1 91 76.9
C03p48760 Brassica napus HOM05D006364 ORTHO05D007968 1.8e-33 146.4 95 73.7
BcaC01g03770 Brassica carinata HOM05D006364 ORTHO05D007968 2.4e-33 146.0 91 75.8
BcaC01g03776 Brassica carinata HOM05D006364 ORTHO05D007968 4.1e-33 145.2 91 75.8
C03p48710 Brassica napus HOM05D006364 ORTHO05D007968 4.1e-33 145.2 91 75.8
BolC3t17152H Brassica oleracea HOM05D006364 ORTHO05D007968 4.1e-33 145.2 91 75.8
Lalb_Chr20g0120331 Lupinus albus HOM05D006364 ORTHO05D007968 4.1e-33 145.2 90 78.9
BcaC09g48691 Brassica carinata HOM05D006364 ORTHO05D007968 5.3e-33 144.8 91 75.8
C01p46890 Brassica napus HOM05D006364 ORTHO05D007968 5.3e-33 144.8 91 75.8
BolC1t04661H Brassica oleracea HOM05D006364 ORTHO05D007968 5.3e-33 144.8 91 75.8
CARHR092600 Cardamine hirsuta HOM05D006364 ORTHO05D007968 1.6e-32 143.3 89 76.4
TWI09G0430 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 2.7e-32 142.5 90 80.0
A01p37010 Brassica napus HOM05D006364 ORTHO05D007968 1.7e-31 139.8 91 73.6
BraA01t03762Z Brassica rapa HOM05D006364 ORTHO05D007968 1.7e-31 139.8 91 73.6
Rhsim04G0245400 Rhododendron simsii HOM05D006364 ORTHO05D007968 2.2e-31 139.4 134 56.0
SHI21779 Sapria himalayana HOM05D006364 ORTHO05D007968 2.9e-31 139.0 147 56.5
Manes.03G210000 Manihot esculenta HOM05D006364 ORTHO05D007968 7.2e-30 134.4 91 75.8
SalBow4G1453 Salvia bowleyana HOM05D006364 ORTHO05D007968 1.2e-29 133.7 92 75.0
AUR62036805 Chenopodium quinoa HOM05D000862 ORTHO05D000943 2.1e-29 132.9 120 60.0
PSO210G6302 Papaver somniferum HOM05D006364 ORTHO05D007968 4.7e-29 131.7 91 70.3
PSO761G0417 Papaver somniferum HOM05D006364 ORTHO05D007968 4.7e-29 131.7 91 70.3
Zm00001eb137950 Zea mays HOM05D006364 ORTHO05D007968 6.1e-29 131.3 119 58.0
ClCG05G006780 Citrullus lanatus HOM05D006364 ORTHO05D007968 1.0e-28 130.6 143 54.5
Sc07g0002970 Simmondsia chinensis HOM05D006364 ORTHO05D007968 3.7e-26 122.1 66 87.9
Lsat_1_v5_gn_6_117381 Lactuca sativa HOM05D006364 ORTHO05D007968 6.3e-26 121.3 73 78.1
Ah.05g176740 Amaranthus hybridus HOM05D006364 ORTHO05D007968 1.1e-25 120.6 66 87.9
Dinv29542 Davidia involucrata HOM05D006364 ORTHO05D007968 1.4e-25 120.2 67 85.1
MBI18_g09661_MAGBIO Magnolia biondii HOM05D006364 ORTHO05D007968 9.1e-25 117.5 118 59.3
Sed0013937 Sechium edule HOM05D006364 ORTHO05D007968 5.9e-24 114.8 66 81.8
Zm00001eb224320 Zea mays HOM05D006364 ORTHO05D007968 2.2e-23 112.8 65 81.5
SalBow6G4934 Salvia bowleyana HOM05D006364 ORTHO05D007968 2.9e-23 112.5 96 61.5
SGA_v2.0_scaffold449G51796 Striga asiatica HOM05D006364 ORTHO05D007968 1.2e-21 107.1 150 50.0
Hund17201 Selenicereus undatus HOM05D000862 ORTHO05D000943 3.6e-21 105.5 89 66.3
Zm00001eb193610 Zea mays HOM05D006364 ORTHO05D007968 2.3e-20 102.8 61 78.7
EL10Ac3g06351 Beta vulgaris HOM05D006364 ORTHO05D007968 3.4e-19 99.0 60 76.7
Pp3c26_11720 Physcomitrium patens HOM05D006364 ORTHO05D007968 2.7e-16 89.4 83 50.6
vmacro07987 Vaccinium macrocarpon HOM05D006364 ORTHO05D007968 2.7e-16 89.4 265 29.4
AagrBONN_evm.TU.Sc2ySwM_368.2196 Anthoceros agrestis HOM05D006364 ORTHO05D007968 3.8e-15 85.5 84 48.8
SMO196G0146 Selaginella moellendorffii HOM05D006364 ORTHO05D007968 1.5e-14 83.6 69 53.6
BraA01t03642Z Brassica rapa HOM05D006364 ORTHO05D007968 2.1e-13 79.7 71 59.2
A01p35610 Brassica napus HOM05D006364 ORTHO05D007968 3.0e-12 75.9 71 56.3
Cfa015704 Carpinus fangiana HOM05D006364 ORTHO05D007968 8.9e-12 74.3 66 62.1
MD13G1146500 Malus domestica HOM05D006364 ORTHO05D007968 6.4e-10 68.2 56 62.5
SalBow3G2548 Salvia bowleyana HOM05D006364 ORTHO05D007968 2.7e-08 62.8 49 55.1
MCO05G593 Micromonas commoda HOM05D006364 ORTHO05D007968 1.7e-07 60.1 69 40.6
Ciclev10027020m.g Citrus clementina HOM05D006364 ORTHO05D007968 5.0e-07 58.5 136 36.0
Actinidia07522 Actinidia chinensis HOM05D006364 ORTHO05D007968 6.6e-07 58.2 56 57.1
Cre14.g626250 Chlamydomonas reinhardtii HOM05D006364 ORTHO05D007968 1.5e-06 57.0 63 42.9


User provided reference genes

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