Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 1.1e-53 213.0 102 100.0
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 2.4e-45 185.3 100 87.0
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 3.1e-45 184.9 99 86.9
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 1.6e-44 182.6 100 86.0
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 3.5e-44 181.4 100 85.0
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 1.0e-43 179.9 102 85.3
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 2.2e-43 178.7 102 82.4
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 2.9e-43 178.3 101 84.2
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 6.5e-43 177.2 102 80.4
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 6.5e-43 177.2 102 79.4
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 8.5e-43 176.8 100 83.0
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 1.9e-42 175.6 102 78.4
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 3.2e-42 174.9 102 81.4
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 3.2e-42 174.9 100 83.0
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 2.7e-41 171.8 100 80.0
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 2.7e-41 171.8 100 80.0
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 3.6e-41 171.4 99 77.8
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 6.1e-41 170.6 102 80.4
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 8.0e-41 170.2 100 80.0
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 1.0e-40 169.9 100 79.0
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 4.0e-40 167.9 102 76.5
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 5.2e-40 167.5 100 80.0
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 8.8e-40 166.8 102 77.5
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 8.8e-40 166.8 102 77.5
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 1.2e-39 166.4 100 79.0
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 4.4e-39 164.5 100 77.0
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 7.5e-39 163.7 100 78.0
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 9.7e-39 163.3 100 74.0
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 2.2e-38 162.2 100 76.0
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 4.8e-38 161.0 93 81.7
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 6.3e-38 160.6 100 77.0
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 1.4e-37 159.5 102 73.5
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 5.3e-37 157.5 100 74.0
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 5.3e-37 157.5 100 74.0
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 5.3e-37 157.5 90 82.2
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 5.3e-37 157.5 90 82.2
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 5.3e-37 157.5 98 77.6
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 1.2e-36 156.4 100 74.0
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 1.2e-36 156.4 100 68.0
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 2.0e-36 155.6 102 71.6
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.0e-36 155.6 122 61.5
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 2.7e-36 155.2 98 69.4
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 2.7e-36 155.2 102 71.6
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 3.5e-36 154.8 100 67.0
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 3.5e-36 154.8 100 72.0
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 4.5e-36 154.5 103 72.8
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 5.9e-36 154.1 100 71.0
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 7.7e-36 153.7 102 71.6
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 1.0e-35 153.3 100 71.0
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 1.0e-35 153.3 100 71.0
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 1.7e-35 152.5 100 73.0
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 2.2e-35 152.1 100 70.0
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 2.2e-35 152.1 101 71.3
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 2.9e-35 151.8 100 71.0
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 3.8e-35 151.4 100 70.0
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 3.8e-35 151.4 100 70.0
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 3.8e-35 151.4 100 70.0
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 5.0e-35 151.0 100 70.0
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 5.0e-35 151.0 104 69.2
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 6.5e-35 150.6 102 69.6
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 8.5e-35 150.2 100 73.0
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 8.5e-35 150.2 100 69.0
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 8.5e-35 150.2 116 65.5
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 1.1e-34 149.8 100 70.0
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 1.1e-34 149.8 100 69.0
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 1.1e-34 149.8 111 67.6
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 1.9e-34 149.1 100 69.0
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 4.2e-34 147.9 100 69.0
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 4.2e-34 147.9 101 66.3
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 4.2e-34 147.9 100 67.0
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 5.5e-34 147.5 102 69.6
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 7.2e-34 147.1 100 67.0
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 1.2e-33 146.4 89 74.2
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 1.2e-33 146.4 99 66.7
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 1.6e-33 146.0 100 67.0
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 2.1e-33 145.6 100 68.0
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 2.1e-33 145.6 100 68.0
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 2.1e-33 145.6 100 67.0
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.7e-33 145.2 101 68.3
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.7e-33 145.2 87 73.6
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 2.7e-33 145.2 102 65.7
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 3.6e-33 144.8 98 67.3
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 3.6e-33 144.8 100 67.0
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 4.7e-33 144.4 97 66.0
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 6.1e-33 144.1 99 68.7
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 6.1e-33 144.1 100 66.0
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 1.0e-32 143.3 102 67.6
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 1.4e-32 142.9 103 68.0
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 1.4e-32 142.9 87 74.7
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 1.8e-32 142.5 100 67.0
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 2.3e-32 142.1 102 68.6
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 4.0e-32 141.4 94 69.1
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 4.0e-32 141.4 94 69.1
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 4.0e-32 141.4 94 69.1
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 4.0e-32 141.4 100 68.0
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 1.5e-31 139.4 100 65.0
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 1.5e-31 139.4 111 63.1
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.0e-31 139.0 87 72.4
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 3.4e-31 138.3 100 65.0
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 3.4e-31 138.3 100 65.0
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 5.7e-31 137.5 100 65.0
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 5.7e-31 137.5 100 65.0
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 9.8e-31 136.7 100 64.0
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.3e-30 136.3 81 75.3
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 1.3e-30 136.3 92 67.4
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 2.2e-30 135.6 87 73.6
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 2.2e-30 135.6 87 70.1
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 2.8e-30 135.2 102 63.7
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 8.3e-30 133.7 74 78.4
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 4.1e-29 131.3 94 66.0
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 2.0e-28 129.0 94 62.8
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 4.5e-28 127.9 72 80.6
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 3.8e-27 124.8 74 71.6
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 5.0e-27 124.4 75 77.3
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 3.6e-25 118.2 73 76.7
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 3.6e-25 118.2 80 65.0
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 4.0e-24 114.8 75 70.7
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 2.0e-23 112.5 101 55.4
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 1.1e-21 106.7 73 64.4
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 4.1e-21 104.8 96 52.1
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 9.2e-21 103.6 93 57.0
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 2.7e-20 102.1 74 67.6
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 6.6e-19 97.4 58 72.4
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 6.1e-17 90.9 64 60.9
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 5.2e-16 87.8 51 76.5
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 1.5e-15 86.3 66 63.6
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 1.7e-11 72.8 48 62.5
Pp3c22_3250 Physcomitrium patens HOM05D006119 ORTHO05D007641 7.3e-10 67.4 71 45.1
PSO339G5888 Papaver somniferum HOM05D006119 ORTHO05D007641 2.1e-09 65.9 85 42.4
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 2.8e-09 65.5 33 87.9
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 1.1e-08 63.5 50 66.0


User provided reference genes

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