Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.26133 Avicennia marina HOM05D005608 ORTHO05D007543 3.4e-169 598.2 289 100.0
Oeu017928.1 Olea europaea HOM05D005608 ORTHO05D007543 8.3e-152 540.4 284 89.8
QL07p003736 Quercus lobata HOM05D005608 ORTHO05D007543 2.7e-150 535.4 283 87.6
MSTRG.19838 Avicennia marina HOM05D005608 ORTHO05D007543 3.0e-149 531.9 288 85.4
Nitab4.5_0001618g0150 Nicotiana tabacum HOM05D005608 ORTHO05D007543 3.3e-148 528.5 284 87.0
PSO384G3225 Papaver somniferum HOM05D005608 ORTHO05D007543 1.6e-147 526.2 284 86.3
Actinidia39202 Actinidia chinensis HOM05D005608 ORTHO05D007543 8.0e-147 523.9 284 84.9
PSO339G6269 Papaver somniferum HOM05D005608 ORTHO05D007543 8.0e-147 523.9 284 85.9
SGA_v2.0_scaffold273G46432 Striga asiatica HOM05D005608 ORTHO05D007543 1.1e-146 523.5 275 88.4
SalBow6G4364 Salvia bowleyana HOM05D005608 ORTHO05D007543 1.4e-146 523.1 289 84.1
PGSC0003DMG401012699 Solanum tuberosum HOM05D005608 ORTHO05D007543 4.0e-146 521.5 284 85.2
Nitab4.5_0000826g0060 Nicotiana tabacum HOM05D005608 ORTHO05D007543 8.9e-146 520.4 284 85.9
Sabra06G0032700 Salix brachista HOM05D005608 ORTHO05D007543 8.9e-146 520.4 283 84.1
Thecc.05G148100 Theobroma cacao HOM05D005608 ORTHO05D007543 8.9e-146 520.4 284 83.8
CSS0026365 Camellia sinensis var. sinensis HOM05D005608 ORTHO05D007543 1.2e-145 520.0 284 84.2
Hma1.2p1_0110F.1_g052840 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 1.2e-145 520.0 284 84.9
Hma1.2p1_1997F.1_g310445 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 1.2e-145 520.0 284 84.9
Lj1A1125T63 Lonicera japonica HOM05D005608 ORTHO05D007543 1.5e-145 519.6 285 84.9
Manes.08G052000 Manihot esculenta HOM05D005608 ORTHO05D007543 1.5e-145 519.6 284 84.9
Nn2g15128 Nelumbo nucifera HOM05D005608 ORTHO05D007543 2.0e-145 519.2 284 85.2
Solyc04g016360.3 Solanum lycopersicum HOM05D005608 ORTHO05D007543 2.6e-145 518.8 284 85.2
Migut.J01725 Erythranthe guttata HOM05D005608 ORTHO05D007543 3.4e-145 518.5 289 85.1
CiPaw.09G040300 Carya illinoinensis HOM05D005608 ORTHO05D007543 4.4e-145 518.1 283 86.2
Prupe.7G053400 Prunus persica HOM05D005608 ORTHO05D007543 5.8e-145 517.7 283 83.7
CAN.G676.7 Capsicum annuum HOM05D005608 ORTHO05D007543 9.8e-145 516.9 284 84.2
Potri.006G047000 Populus trichocarpa HOM05D005608 ORTHO05D007543 1.7e-144 516.2 284 83.1
GSVIVG01033232001 Vitis vinifera HOM05D005608 ORTHO05D007543 1.7e-144 516.2 283 83.4
Rhsim03G0028900 Rhododendron simsii HOM05D005608 ORTHO05D007543 2.2e-144 515.8 287 83.6
CANSAT80G2626 Cannabis sativa HOM05D005608 ORTHO05D007543 2.9e-144 515.4 288 84.0
Sopen04g008450 Solanum pennellii HOM05D005608 ORTHO05D007543 4.9e-144 514.6 284 84.2
Haze_19791 Corylus avellana HOM05D005608 ORTHO05D007543 8.3e-144 513.8 283 85.2
Haze_19795 Corylus avellana HOM05D005608 ORTHO05D007543 8.3e-144 513.8 283 85.2
Duzib106G2070 Durio zibethinus HOM05D005608 ORTHO05D007543 8.3e-144 513.8 284 83.1
MD14G1077300 Malus domestica HOM05D005608 ORTHO05D007543 1.4e-143 513.1 283 83.0
MELO3C026333.2 Cucumis melo HOM05D005608 ORTHO05D007543 1.9e-143 512.7 283 82.7
Hund24681 Selenicereus undatus HOM05D005608 ORTHO05D007543 2.4e-143 512.3 284 84.5
TAR369G0715 Trochodendron aralioides HOM05D005608 ORTHO05D007543 3.2e-143 511.9 282 83.3
Lj5g0018305 Lotus japonicus HOM05D005608 ORTHO05D007543 5.4e-143 511.1 283 81.6
TWI77G0221 Tripterygium wilfordii HOM05D005608 ORTHO05D007543 5.4e-143 511.1 284 82.7
vmacro21968 Vaccinium macrocarpon HOM05D005608 ORTHO05D007543 5.4e-143 511.1 284 82.7
Gohir.A01G193800 Gossypium hirsutum HOM05D005608 ORTHO05D007543 7.0e-143 510.8 284 82.7
THA.LOC104801987 Tarenaya hassleriana HOM05D005608 ORTHO05D007543 9.2e-143 510.4 283 84.1
TAR633G2234 Trochodendron aralioides HOM05D005608 ORTHO05D007543 9.2e-143 510.4 285 82.1
Cfa016779 Carpinus fangiana HOM05D005608 ORTHO05D007543 1.2e-142 510.0 283 84.8
Gohir.D01G184100 Gossypium hirsutum HOM05D005608 ORTHO05D007543 2.1e-142 509.2 284 83.5
Gorai.002G227600 Gossypium raimondii HOM05D005608 ORTHO05D007543 2.1e-142 509.2 284 83.5
Atru.chr1.1230 Acer truncatum HOM05D005608 ORTHO05D007543 6.0e-142 507.7 284 82.7
Sed0023334 Sechium edule HOM05D005608 ORTHO05D007543 7.8e-142 507.3 283 82.3
TAR369G0194 Trochodendron aralioides HOM05D005608 ORTHO05D007543 1.0e-141 506.9 282 82.6
CANSAT80G0897 Cannabis sativa HOM05D005608 ORTHO05D007543 1.7e-141 506.1 288 82.6
RcHm_v2.0_Chr3g0483631 Rosa chinensis HOM05D005608 ORTHO05D007543 1.7e-141 506.1 283 82.0
CsaV3_4G027510 Cucumis sativus L. HOM05D005608 ORTHO05D007543 2.3e-141 505.8 283 81.6
Sc19g0008540 Simmondsia chinensis HOM05D005608 ORTHO05D007543 3.9e-141 505.0 284 82.0
DCAR_013613 Daucus carota HOM05D005608 ORTHO05D007543 5.1e-141 504.6 283 81.6
Aa31LG1G23580 Aethionema arabicum HOM05D005608 ORTHO05D007543 6.6e-141 504.2 284 83.1
Aqoxy2G00245 Aquilegia oxysepala HOM05D005608 ORTHO05D007543 6.6e-141 504.2 284 82.7
Ciclev10005572m.g Citrus clementina HOM05D005608 ORTHO05D007543 6.6e-141 504.2 284 83.1
Eucgr.K02019 Eucalyptus grandis HOM05D005608 ORTHO05D007543 8.6e-141 503.8 285 82.8
EL10Ac3g07137 Beta vulgaris HOM05D005608 ORTHO05D007543 1.9e-140 502.7 284 81.7
Phvul.007G250500 Phaseolus vulgaris HOM05D005608 ORTHO05D007543 1.9e-140 502.7 283 80.6
Cc06_g18100 Coffea canephora HOM05D005608 ORTHO05D007543 7.3e-140 500.7 288 81.9
Glyma.02G186700 Glycine max HOM05D005608 ORTHO05D007543 2.8e-139 498.8 283 80.9
FAN05G0975 Fragaria x ananassa HOM05D005608 ORTHO05D007543 4.7e-139 498.0 283 79.9
Peaxi162Scf00130g00829 Petunia axillaris HOM05D005608 ORTHO05D007543 6.2e-139 497.7 284 81.0
Lalb_Chr06g0173501 Lupinus albus HOM05D005608 ORTHO05D007543 8.1e-139 497.3 281 81.1
Glyma.10G106900 Glycine max HOM05D005608 ORTHO05D007543 1.8e-138 496.1 281 80.4
VMungo0720G2960 Vigna mungo HOM05D005608 ORTHO05D007543 3.1e-138 495.4 283 79.2
Thhalv10017045m.g Eutrema salsugineum HOM05D005608 ORTHO05D007543 4.4e-137 491.5 282 80.5
HanXRQChr04g0125051 Helianthus annuus HOM05D005608 ORTHO05D007543 4.4e-137 491.5 285 80.4
Sp4g23810 Schrenkiella parvula HOM05D005608 ORTHO05D007543 4.4e-137 491.5 282 81.2
TPR.G19657 Trifolium pratense HOM05D005608 ORTHO05D007543 4.4e-137 491.5 279 80.6
CARHR136660 Cardamine hirsuta HOM05D005608 ORTHO05D007543 7.5e-137 490.7 282 81.2
Medtr1g052175 Medicago truncatula HOM05D005608 ORTHO05D007543 7.5e-137 490.7 281 80.4
Medtr4g008660 Medicago truncatula HOM05D005608 ORTHO05D007543 7.5e-137 490.7 281 80.4
BcaNung04068 Brassica carinata HOM05D005608 ORTHO05D007543 6.4e-136 487.6 282 80.1
FvH4_6g24520 Fragaria vesca HOM05D005608 ORTHO05D007543 6.4e-136 487.6 283 78.8
FAN02G1028 Fragaria x ananassa HOM05D005608 ORTHO05D007543 8.3e-136 487.3 283 78.8
arahy.Tifrunner.gnm1.ann1.RCN63F Arachis hypogaea HOM05D005608 ORTHO05D007543 1.4e-135 486.5 281 79.7
AL4G39630 Arabidopsis lyrata HOM05D005608 ORTHO05D007543 2.4e-135 485.7 282 80.1
AT2G41530 Arabidopsis thaliana HOM05D005608 ORTHO05D007543 4.1e-135 485.0 282 80.1
A05p02350 Brassica napus HOM05D005608 ORTHO05D007543 5.4e-135 484.6 283 80.2
C04p02790 Brassica napus HOM05D005608 ORTHO05D007543 2.1e-134 482.6 283 80.2
BolC4t21919H Brassica oleracea HOM05D005608 ORTHO05D007543 2.1e-134 482.6 283 80.2
A03p23310 Brassica napus HOM05D005608 ORTHO05D007543 2.7e-134 482.3 282 79.4
BraA03t11549Z Brassica rapa HOM05D005608 ORTHO05D007543 2.7e-134 482.3 282 79.4
Carub.0004s2382 Capsella rubella HOM05D005608 ORTHO05D007543 2.7e-134 482.3 282 80.1
AUR62026096 Chenopodium quinoa HOM05D005608 ORTHO05D007543 2.7e-134 482.3 301 75.7
BcaC01g05330 Brassica carinata HOM05D005608 ORTHO05D007543 4.6e-134 481.5 282 79.4
BraA05t19229Z Brassica rapa HOM05D005608 ORTHO05D007543 4.6e-134 481.5 283 79.9
Nitab4.5_0000636g0050 Nicotiana tabacum HOM05D005608 ORTHO05D007543 4.6e-134 481.5 284 79.9
Peaxi162Scf00130g00828 Petunia axillaris HOM05D005608 ORTHO05D007543 4.6e-134 481.5 284 80.6
BcaB01g03463 Brassica carinata HOM05D005608 ORTHO05D007543 6.0e-134 481.1 282 79.4
HPP92_001434 Vanilla planifolia HOM05D005608 ORTHO05D007543 1.0e-133 480.3 281 77.9
C03p27830 Brassica napus HOM05D005608 ORTHO05D007543 1.3e-133 479.9 282 79.4
BolC3t15154H Brassica oleracea HOM05D005608 ORTHO05D007543 2.3e-133 479.2 282 79.1
FAN14G1555 Fragaria x ananassa HOM05D005608 ORTHO05D007543 3.0e-133 478.8 286 77.3
arahy.Tifrunner.gnm1.ann1.QZL5XH Arachis hypogaea HOM05D005608 ORTHO05D007543 8.6e-133 477.2 294 75.5
ECA236G2378 Erigeron canadensis HOM05D005608 ORTHO05D007543 4.3e-132 474.9 273 80.2
Ca_12257_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 7.3e-132 474.2 278 79.1
CDE05G0378 Ceratophyllum demersum HOM05D005608 ORTHO05D007543 2.1e-131 472.6 281 74.4
Lsat_1_v5_gn_8_82180 Lactuca sativa HOM05D005608 ORTHO05D007543 8.1e-131 470.7 334 68.9
Ca_12243_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 1.1e-130 470.3 282 79.1
Sed0008486 Sechium edule HOM05D005608 ORTHO05D007543 3.1e-130 468.8 283 76.0
ClCG04G003700 Citrullus lanatus HOM05D005608 ORTHO05D007543 3.4e-129 465.3 283 76.3
unitig_21.g20519 Utricularia gibba HOM05D005608 ORTHO05D007543 5.8e-129 464.5 285 80.4
SEGI_13354 Sequoiadendron giganteum HOM05D005608 ORTHO05D007543 4.9e-128 461.5 281 75.1
ATR0721G011 Amborella trichopoda HOM05D005608 ORTHO05D007543 2.4e-127 459.1 277 75.5
Cpa.g.sc182.15 Carica papaya HOM05D005608 ORTHO05D007543 5.3e-122 441.4 246 82.1
Os01g0939700 Oryza sativa ssp. japonica HOM05D005608 ORTHO05D007543 5.3e-122 441.4 278 70.9
Sed0024564 Sechium edule HOM05D005608 ORTHO05D007543 6.9e-122 441.0 283 72.1
Eucgr.K01713 Eucalyptus grandis HOM05D005608 ORTHO05D007543 4.9e-120 434.9 275 73.8
AUR62024510 Chenopodium quinoa HOM05D005608 ORTHO05D007543 4.6e-118 428.3 236 83.5
Pp3c11_8660 Physcomitrium patens HOM05D005608 ORTHO05D007543 1.0e-117 427.2 290 66.9
MBI19_g29889_MAGBIO Magnolia biondii HOM05D005608 ORTHO05D007543 4.0e-114 415.2 234 79.1
Mapoly0020s0136 Marchantia polymorpha HOM05D005608 ORTHO05D007543 1.3e-109 400.2 282 65.2
MD12G1082500 Malus domestica HOM05D005608 ORTHO05D007543 1.5e-108 396.7 224 82.6
CBR_g12387 Chara braunii HOM05D005608 ORTHO05D007543 1.3e-107 393.7 280 66.1
SMO174G0027 Selaginella moellendorffii HOM05D005608 ORTHO05D007543 9.9e-105 384.0 279 65.2
Dinv39657 Davidia involucrata HOM05D005608 ORTHO05D007543 1.9e-100 369.8 195 86.2
Zm00001eb363240 Zea mays HOM05D005608 ORTHO05D007543 3.4e-97 359.0 221 74.2
SalBow6G3992 Salvia bowleyana HOM05D005608 ORTHO05D007543 7.1e-95 351.3 289 62.3
Cre03.g158800 Chlamydomonas reinhardtii HOM05D005608 ORTHO05D007543 1.2e-94 350.5 284 59.5
COL.COLO4_32782 Corchorus olitorius HOM05D005608 ORTHO05D007543 3.2e-87 325.9 275 59.6
TPR.G19661 Trifolium pratense HOM05D005608 ORTHO05D007543 4.2e-79 298.9 167 82.0
Psat6g091560 Pisum sativum HOM05D005608 ORTHO05D007543 5.5e-79 298.5 167 83.2
Haze_27232 Corylus avellana HOM05D005608 ORTHO05D007543 1.2e-73 280.8 259 50.6
Haze_26706 Corylus avellana HOM05D005608 ORTHO05D007543 6.1e-70 268.5 275 49.1
PRCOL_00003320 Prasinoderma coloniale HOM05D000219 ORTHO05D000226 2.5e-63 246.5 280 47.9
MCO09G089 Micromonas commoda HOM05D000219 ORTHO05D000226 2.7e-62 243.0 279 46.6
Medtr0931s0010 Medicago truncatula HOM05D005608 ORTHO05D044358 6.8e-61 238.4 231 52.4
Medtr1g052165 Medicago truncatula HOM05D005608 ORTHO05D048895 5.4e-50 202.2 114 78.9
TPR.G23055 Trifolium pratense HOM05D005608 ORTHO05D048895 3.7e-43 179.5 103 76.7
Zm00001eb010250 Zea mays HOM05D005608 ORTHO05D007543 8.1e-22 108.6 125 50.4
Zm00001eb141600 Zea mays HOM05D005608 ORTHO05D007543 3.3e-15 86.7 63 65.1
SEGI_35043 Sequoiadendron giganteum HOM05D005608 ORTHO05D384886 1.1e-13 81.6 69 55.1
Pp3c1_10050 Physcomitrium patens HOM05D005608 ORTHO05D319324 5.8e-12 75.9 56 57.1
PSO765G0043 Papaver somniferum HOM05D005608 ORTHO05D302623 3.6e-06 56.6 39 71.8


User provided reference genes

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