Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.26055 Avicennia marina HOM05D003594 ORTHO05D004268 2.0e-158 562.4 287 100.0
MSTRG.27536 Avicennia marina HOM05D003594 ORTHO05D004268 1.1e-58 231.1 120 94.2
SalBow6G4638 Salvia bowleyana HOM05D003594 ORTHO05D004268 7.5e-36 155.2 285 41.1
Dinv11846 Davidia involucrata HOM05D003594 ORTHO05D004268 2.3e-29 133.7 294 32.7
Cc02_g09740 Coffea canephora HOM05D003594 ORTHO05D004268 9.8e-28 128.3 305 32.8
SGA_v2.0_scaffold295G47526 Striga asiatica HOM05D003594 ORTHO05D004268 7.0e-26 122.1 294 39.8
Oeu025587.1 Olea europaea HOM05D003594 ORTHO05D004268 4.5e-25 119.4 287 35.5
Peaxi162Scf00173g00417 Petunia axillaris HOM05D003594 ORTHO05D004268 3.3e-23 113.2 294 30.6
Cc02_g29780 Coffea canephora HOM05D003594 ORTHO05D004268 4.7e-22 109.4 292 32.2
Migut.F00912 Erythranthe guttata HOM05D003594 ORTHO05D004268 4.7e-22 109.4 230 40.4
CSS0019720 Camellia sinensis var. sinensis HOM05D003594 ORTHO05D004268 8.0e-22 108.6 294 33.7
CAN.G645.3 Capsicum annuum HOM05D003594 ORTHO05D004268 2.0e-20 104.0 301 30.2
PGSC0003DMG400023977 Solanum tuberosum HOM05D003594 ORTHO05D004268 4.9e-19 99.4 293 29.0
Nitab4.5_0005622g0060 Nicotiana tabacum HOM05D003594 ORTHO05D004268 6.3e-19 99.0 301 29.6
TAR622G0410 Trochodendron aralioides HOM05D003594 ORTHO05D004268 8.3e-19 98.6 310 32.6
CSS0031708 Camellia sinensis var. sinensis HOM05D003594 ORTHO05D004268 1.4e-18 97.8 236 33.9
Rhsim03G0098900 Rhododendron simsii HOM05D003594 ORTHO05D004268 1.4e-18 97.8 300 31.7
Nitab4.5_0001437g0090 Nicotiana tabacum HOM05D003594 ORTHO05D004268 1.8e-18 97.4 293 30.0
Sopen11g002930 Solanum pennellii HOM05D003594 ORTHO05D004268 2.4e-18 97.1 293 27.6
Solyc11g007010.2 Solanum lycopersicum HOM05D003594 ORTHO05D004268 3.2e-18 96.7 293 27.6
DCAR_006339 Daucus carota HOM05D003594 ORTHO05D004268 7.0e-18 95.5 298 30.2
GSVIVG01032568001 Vitis vinifera HOM05D003594 ORTHO05D004268 1.2e-17 94.7 293 32.4
Sabra10G0186200 Salix brachista HOM05D003594 ORTHO05D004268 2.7e-17 93.6 300 29.7
Potri.010G238000 Populus trichocarpa HOM05D003594 ORTHO05D004268 3.5e-17 93.2 293 29.4
Cfa011279 Carpinus fangiana HOM05D003594 ORTHO05D004268 7.8e-17 92.0 293 31.1
Nn4g23115 Nelumbo nucifera HOM05D003594 ORTHO05D004268 3.9e-16 89.7 300 30.7
Haze_02506 Corylus avellana HOM05D003594 ORTHO05D004268 6.6e-16 89.0 293 30.4
Lj3C928G2 Lonicera japonica HOM05D003594 ORTHO05D004268 8.6e-16 88.6 298 28.2
Cc02_g29810 Coffea canephora HOM05D003594 ORTHO05D004268 2.8e-14 83.6 165 33.3
Aqoxy2G02949 Aquilegia oxysepala HOM05D003594 ORTHO05D004268 1.8e-13 80.9 293 29.0
Glyma.16G027600 Glycine max HOM05D003594 ORTHO05D004268 1.8e-13 80.9 293 28.3
CiPaw.13G039500 Carya illinoinensis HOM05D003594 ORTHO05D004268 3.1e-13 80.1 292 28.4
Cpa.g.sc183.16 Carica papaya HOM05D003594 ORTHO05D004268 6.8e-13 79.0 151 36.4
Eucgr.J00989 Eucalyptus grandis HOM05D003594 ORTHO05D004268 6.8e-13 79.0 301 27.6
PSO478G3548 Papaver somniferum HOM05D003594 ORTHO05D004268 4.4e-12 76.3 300 30.7
Aqoxy3G00687_Aqoxy3G00688 Aquilegia oxysepala HOM05D003594 ORTHO05D004268 7.5e-12 75.5 309 31.7
Prupe.3G003400 Prunus persica HOM05D003594 ORTHO05D004268 1.7e-11 74.3 298 29.2
Thecc.10G111800 Theobroma cacao HOM05D003594 ORTHO05D004268 1.7e-11 74.3 301 28.9
Lsat_1_v5_gn_2_104580 Lactuca sativa HOM05D003594 ORTHO05D004268 2.9e-11 73.6 103 42.7
Nn3g17196 Nelumbo nucifera HOM05D003594 ORTHO05D004268 4.9e-11 72.8 303 29.4
Lj3g0004598 Lotus japonicus HOM05D003594 ORTHO05D004268 1.4e-10 71.2 289 27.3
Actinidia06697 Actinidia chinensis HOM05D003594 ORTHO05D004268 1.9e-10 70.9 296 28.7
Phvul.010G110700 Phaseolus vulgaris HOM05D003594 ORTHO05D004268 3.2e-10 70.1 285 27.4
Glyma.07G058700 Glycine max HOM05D003594 ORTHO05D004268 4.1e-10 69.7 292 27.4
PSO017G2985 Papaver somniferum HOM05D003594 ORTHO05D004268 4.1e-10 69.7 299 27.8
TPR.G23930 Trifolium pratense HOM05D003594 ORTHO05D004268 9.2e-10 68.6 280 25.7
VMungo0331G0994 Vigna mungo HOM05D003594 ORTHO05D004268 1.2e-09 68.2 286 28.7
MD17G1284000 Malus domestica HOM05D003594 ORTHO05D004268 1.6e-09 67.8 295 30.2
MD09G1292100 Malus domestica HOM05D003594 ORTHO05D004268 2.7e-09 67.0 295 28.1
Medtr8g028030 Medicago truncatula HOM05D003594 ORTHO05D004268 2.7e-09 67.0 297 26.9
arahy.Tifrunner.gnm1.ann1.8EA83L Arachis hypogaea HOM05D003594 ORTHO05D004268 4.6e-09 66.2 288 26.4
arahy.Tifrunner.gnm1.ann1.Q3AX4Y Arachis hypogaea HOM05D003594 ORTHO05D004268 7.8e-09 65.5 288 26.4
Psat4g159240 Pisum sativum HOM05D003594 ORTHO05D004268 1.3e-08 64.7 293 26.6
Phvul.003G001400 Phaseolus vulgaris HOM05D003594 ORTHO05D004268 1.7e-08 64.3 290 27.2
Manes.11G108901 Manihot esculenta HOM05D003594 ORTHO05D004268 3.0e-08 63.5 295 27.8
EL10Ac4g08659 Beta vulgaris HOM05D003594 ORTHO05D004268 3.9e-08 63.2 289 27.3
Lalb_Chr10g0100231 Lupinus albus HOM05D003594 ORTHO05D004268 1.5e-07 61.2 290 27.9
HanXRQChr11g0342181 Helianthus annuus HOM05D003594 ORTHO05D004268 4.3e-07 59.7 224 29.0
Actinidia36695 Actinidia chinensis HOM05D003594 ORTHO05D004268 5.6e-07 59.3 300 28.3
COL.COLO4_28858 Corchorus olitorius HOM05D003594 ORTHO05D004268 5.6e-07 59.3 298 26.2
Hund22286 Selenicereus undatus HOM05D003594 ORTHO05D004268 5.6e-07 59.3 295 28.1
Gohir.A06G169100 Gossypium hirsutum HOM05D003594 ORTHO05D004268 7.3e-07 58.9 293 24.6
Gohir.D06G176700 Gossypium hirsutum HOM05D003594 ORTHO05D004268 9.5e-07 58.5 301 24.6
CDE09G0981 Ceratophyllum demersum HOM05D003594 ORTHO05D004268 1.2e-06 58.2 308 27.3
ECA238G3867 Erigeron canadensis HOM05D003594 ORTHO05D004268 1.6e-06 57.8 161 28.0
Gorai.010G208000 Gossypium raimondii HOM05D003594 ORTHO05D004268 1.6e-06 57.8 295 24.7
TWI38G1480 Tripterygium wilfordii HOM05D003594 ORTHO05D004268 1.6e-06 57.8 305 27.2
Duzib052G0830 Durio zibethinus HOM05D003594 ORTHO05D004268 2.1e-06 57.4 294 27.6
FAN04G1757 Fragaria x ananassa HOM05D003594 ORTHO05D004268 2.1e-06 57.4 98 32.7
FAN08G1578 Fragaria x ananassa HOM05D003594 ORTHO05D004268 2.1e-06 57.4 98 32.7
MD09G1289100 Malus domestica HOM05D003594 ORTHO05D004268 2.1e-06 57.4 232 28.4
Prupe.6G159300 Prunus persica HOM05D003594 ORTHO05D004268 2.8e-06 57.0 147 32.0
FvH4_5g22640 Fragaria vesca HOM05D003594 ORTHO05D004268 6.2e-06 55.8 98 32.7
FAN18G3192 Fragaria x ananassa HOM05D003594 ORTHO05D004268 6.2e-06 55.8 98 32.7
QL04p046058 Quercus lobata HOM05D003594 ORTHO05D004268 6.2e-06 55.8 243 27.6


User provided reference genes

Program Settings