Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 1.1e-167 593.2 292 100.0
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 2.0e-153 545.8 289 90.0
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 5.1e-149 531.2 289 87.9
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 1.9e-148 529.3 289 88.2
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 4.3e-148 528.1 289 87.5
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 9.6e-148 526.9 289 87.9
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 1.3e-147 526.6 289 87.9
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 2.1e-147 525.8 289 86.5
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 4.8e-147 524.6 289 87.2
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 4.8e-147 524.6 286 87.4
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 4.8e-147 524.6 289 86.9
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 4.8e-147 524.6 288 87.5
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 6.2e-147 524.2 289 86.2
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 8.1e-147 523.9 289 87.2
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 1.1e-146 523.5 289 86.5
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 1.4e-146 523.1 289 86.5
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 1.4e-146 523.1 289 86.2
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 6.9e-146 520.8 286 87.1
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 9.0e-146 520.4 289 85.8
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 1.2e-145 520.0 289 86.2
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 1.2e-145 520.0 289 86.9
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 1.2e-145 520.0 289 84.8
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 1.2e-145 520.0 289 86.5
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 2.0e-145 519.2 289 86.2
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 2.0e-145 519.2 289 86.2
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 2.0e-145 519.2 289 85.8
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 2.6e-145 518.8 289 85.8
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 3.4e-145 518.5 289 86.9
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 4.5e-145 518.1 289 85.5
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 5.8e-145 517.7 289 85.5
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 7.6e-145 517.3 289 86.5
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 7.6e-145 517.3 289 87.5
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 9.9e-145 516.9 289 85.8
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 2.2e-144 515.8 289 85.5
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 4.9e-144 514.6 288 84.4
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.9e-144 514.6 289 86.2
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 8.4e-144 513.8 291 84.5
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 8.4e-144 513.8 291 84.5
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 1.4e-143 513.1 286 85.7
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 1.9e-143 512.7 289 84.8
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 1.9e-143 512.7 289 83.7
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 3.2e-143 511.9 289 84.4
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 3.2e-143 511.9 289 83.0
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 3.2e-143 511.9 291 86.3
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 1.6e-142 509.6 289 84.1
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 3.5e-142 508.4 289 84.4
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 6.0e-142 507.7 289 83.4
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 7.9e-142 507.3 289 84.1
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 1.0e-141 506.9 289 82.7
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 1.0e-141 506.9 287 84.0
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.0e-141 506.9 289 84.4
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 1.8e-141 506.1 289 84.1
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 3.0e-141 505.4 280 86.1
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 5.1e-141 504.6 290 83.4
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 6.7e-141 504.2 289 83.7
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 6.7e-141 504.2 289 84.1
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 1.1e-140 503.4 287 83.3
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 1.9e-140 502.7 287 82.9
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 4.3e-140 501.5 289 83.7
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.3e-140 501.5 289 83.7
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 5.6e-140 501.1 289 83.0
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 5.6e-140 501.1 289 83.4
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 9.6e-140 500.4 320 76.6
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 1.3e-139 500.0 289 84.1
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 2.1e-139 499.2 287 81.5
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.8e-139 498.8 289 83.0
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 4.8e-139 498.0 288 83.3
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 6.2e-139 497.7 289 80.6
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 6.2e-139 497.7 289 80.6
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 1.4e-138 496.5 289 80.6
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 3.1e-138 495.4 291 81.4
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 9.0e-138 493.8 287 81.2
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 3.4e-137 491.9 289 82.0
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 5.8e-137 491.1 289 79.2
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 5.8e-137 491.1 289 81.0
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 1.0e-136 490.3 292 79.1
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.0e-136 490.3 289 80.3
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 1.3e-136 490.0 289 79.2
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 2.9e-136 488.8 289 78.9
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 3.8e-136 488.4 289 78.9
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 4.9e-136 488.0 289 79.2
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 4.9e-136 488.0 289 79.2
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.1e-135 486.9 289 82.4
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.1e-135 486.9 292 81.2
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.4e-135 486.5 289 80.6
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 1.9e-135 486.1 289 78.9
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 1.9e-135 486.1 289 78.9
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 4.2e-135 485.0 289 78.5
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 1.2e-134 483.4 271 86.3
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 2.1e-134 482.6 288 78.1
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 4.6e-134 481.5 289 78.2
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 3.9e-133 478.4 289 77.2
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 3.9e-133 478.4 288 77.4
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 3.9e-133 478.4 288 77.4
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 3.9e-133 478.4 289 77.2
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 1.1e-132 476.9 287 77.4
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 4.3e-132 474.9 289 79.6
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 9.6e-132 473.8 271 84.1
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 3.7e-131 471.9 288 78.8
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 6.3e-131 471.1 289 77.5
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 9.0e-130 467.2 271 83.0
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 1.5e-129 466.5 272 82.4
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 2.6e-129 465.7 255 86.7
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 2.9e-128 462.2 289 78.5
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 2.9e-128 462.2 289 78.2
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 5.0e-128 461.5 271 82.3
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 1.9e-127 459.5 310 74.2
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 9.3e-127 457.2 291 74.2
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 7.4e-124 447.6 289 76.8
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 6.5e-120 434.5 308 70.1
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.1e-119 433.7 270 78.9
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 5.5e-119 431.4 285 71.6
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 8.8e-117 424.1 285 70.2
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 6.9e-114 414.5 288 67.4
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 2.9e-112 409.1 274 71.5
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 2.1e-110 402.9 270 70.4
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 2.8e-107 392.5 281 64.8
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 5.7e-100 368.2 219 79.9
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.0e-93 347.4 322 59.3
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 8.3e-91 337.8 183 88.5
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 8.0e-86 321.2 183 85.2
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 1.2e-84 317.4 292 52.7
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.6e-84 316.2 186 83.3
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 9.2e-82 307.8 296 53.4
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 2.7e-81 306.2 290 54.5
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 4.0e-77 292.4 188 73.4
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 2.9e-75 286.2 170 80.0
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 2.1e-70 270.0 293 46.1
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 1.4e-58 230.7 310 44.8
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 2.1e-54 216.9 164 66.5
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 6.4e-51 205.3 221 52.5
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.5e-49 199.5 218 52.3
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 4.3e-47 192.6 106 84.0
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.6e-41 172.6 98 84.7
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 7.8e-41 171.8 99 82.8
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.8e-38 162.5 94 83.0
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 2.9e-27 126.7 75 85.3
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 5.1e-24 115.9 164 42.1
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.2e-20 104.8 94 60.6
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 6.5e-11 72.4 51 64.7
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 1.3e-06 58.2 39 79.5


User provided reference genes

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