Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 8.8e-151 537.0 277 100.0
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 1.1e-87 327.4 237 76.8
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 6.4e-85 318.2 239 71.5
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 1.3e-69 267.3 242 64.9
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 1.7e-69 266.9 223 65.0
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 2.2e-69 266.5 238 61.3
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 8.4e-69 264.6 238 61.3
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 4.2e-68 262.3 207 65.2
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 1.2e-67 260.8 242 60.3
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 7.9e-67 258.1 210 65.7
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 2.3e-66 256.5 241 58.1
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 3.9e-66 255.8 238 63.0
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 3.9e-66 255.8 204 64.2
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 5.7e-65 251.9 206 65.5
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 7.4e-65 251.5 203 65.5
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 9.6e-65 251.1 204 63.7
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 9.6e-65 251.1 208 64.4
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 2.1e-64 250.0 206 63.6
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 8.2e-64 248.1 240 59.2
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 1.8e-63 246.9 216 64.8
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 1.8e-63 246.9 208 62.0
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 4.1e-63 245.7 172 71.5
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 4.1e-63 245.7 205 63.9
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 5.3e-63 245.4 192 67.7
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 6.9e-63 245.0 251 55.8
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 2.6e-62 243.0 204 62.7
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 3.4e-62 242.7 208 62.0
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 3.4e-62 242.7 184 66.8
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 4.5e-62 242.3 206 61.2
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 5.9e-62 241.9 221 59.7
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 7.6e-62 241.5 257 56.8
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 7.6e-62 241.5 231 58.0
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 1.0e-61 241.1 240 57.9
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 1.3e-61 240.7 216 63.4
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 1.3e-61 240.7 173 68.8
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 1.7e-61 240.4 192 65.1
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 2.2e-61 240.0 240 58.8
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 2.2e-61 240.0 211 62.6
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 2.2e-61 240.0 241 58.1
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 5.0e-61 238.8 209 59.8
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 6.5e-61 238.4 214 60.7
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 8.5e-61 238.0 172 68.6
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 1.1e-60 237.7 202 65.8
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 1.4e-60 237.3 240 57.5
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 1.4e-60 237.3 240 57.9
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 1.9e-60 236.9 204 64.7
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 9.3e-60 234.6 204 64.2
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 2.7e-59 233.0 241 57.7
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 2.7e-59 233.0 206 62.6
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 2.7e-59 233.0 195 62.1
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 1.0e-58 231.1 241 56.8
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 1.3e-58 230.7 195 61.5
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 1.8e-58 230.3 256 54.3
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 1.8e-58 230.3 206 63.6
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 3.0e-58 229.6 204 59.8
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 5.1e-58 228.8 205 60.0
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 1.9e-57 226.9 208 60.1
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 2.5e-57 226.5 241 55.6
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 1.3e-56 224.2 200 59.0
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 2.2e-56 223.4 208 57.7
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 3.7e-56 222.6 231 53.2
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 1.1e-55 221.1 198 57.6
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 1.1e-55 221.1 180 65.6
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 2.4e-55 219.9 195 57.4
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 5.3e-55 218.8 196 58.2
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 2.0e-54 216.9 208 55.8
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 2.0e-54 216.9 208 55.8
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 2.0e-54 216.9 208 55.8
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 2.0e-54 216.9 210 58.1
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 2.6e-54 216.5 197 57.9
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 2.6e-54 216.5 192 57.3
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 4.5e-54 215.7 204 57.4
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 5.9e-54 215.3 192 57.3
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 7.7e-54 214.9 198 56.6
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 1.0e-53 214.5 255 51.0
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 1.3e-53 214.2 199 56.8
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 1.7e-53 213.8 207 54.6
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 4.2e-52 209.1 174 63.2
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 5.5e-52 208.8 196 57.7
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 9.4e-52 208.0 205 53.2
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 1.6e-51 207.2 202 56.9
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 6.1e-51 205.3 174 60.3
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 8.8e-50 201.4 171 62.0
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 2.2e-48 196.8 211 54.5
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 4.1e-47 192.6 171 57.9
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 1.5e-46 190.7 163 60.1
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 7.7e-46 188.3 162 60.5
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 7.9e-43 178.3 188 50.0
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 3.9e-42 176.0 182 50.5
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 6.7e-42 175.3 134 68.7
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 3.3e-41 172.9 242 45.5
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 3.3e-41 172.9 133 66.9
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 2.4e-39 166.8 200 47.5
TAR636G1368 Trochodendron aralioides HOM05D007323 ORTHO05D009238 1.1e-36 157.9 187 50.3
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 1.6e-35 154.1 142 54.9
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 2.0e-30 137.1 104 68.3
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 2.0e-30 137.1 104 68.3
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 6.5e-29 132.1 104 65.4
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 1.5e-28 131.0 142 48.6
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 3.6e-27 126.3 329 31.9
MD08G1071400 Malus domestica HOM05D007323 ORTHO05D009238 1.7e-16 90.9 64 73.4
Cre16.g684150 Chlamydomonas reinhardtii HOM05D007323 ORTHO05D009238 4.5e-14 82.8 166 33.1
Solyc08g061800.3 Solanum lycopersicum HOM05D007323 ORTHO05D009238 3.0e-10 70.1 68 54.4
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 6.4e-08 62.4 144 30.6


User provided reference genes

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