Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 2.0e-144 515.8 267 100.0
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 3.1e-108 395.6 260 76.2
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 4.3e-94 348.6 246 72.8
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 5.6e-94 348.2 256 66.8
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 2.6e-91 339.3 252 65.1
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 4.4e-91 338.6 247 66.4
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 4.1e-89 332.0 250 66.0
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 7.1e-89 331.3 246 68.3
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 6.0e-88 328.2 252 68.7
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 7.8e-88 327.8 247 64.8
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 8.6e-87 324.3 255 62.7
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 2.8e-85 319.3 255 64.3
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 1.4e-84 317.0 231 68.0
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 4.9e-82 308.5 231 64.9
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 6.4e-82 308.1 252 61.5
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 6.4e-82 308.1 255 61.6
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 1.9e-81 306.6 247 60.7
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 4.2e-81 305.4 231 64.5
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 2.7e-80 302.8 253 60.5
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 2.7e-80 302.8 248 62.9
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 6.0e-80 301.6 252 59.9
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 2.3e-79 299.7 239 64.9
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 1.1e-78 297.4 255 58.0
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 1.1e-78 297.4 253 60.1
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 1.9e-78 296.6 240 60.4
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 1.9e-78 296.6 240 60.4
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 2.1e-77 293.1 235 62.6
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 3.6e-77 292.4 241 61.4
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 6.2e-77 291.6 255 57.6
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 8.1e-77 291.2 252 58.3
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 8.1e-77 291.2 256 59.4
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 3.1e-76 289.3 255 58.4
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 4.0e-76 288.9 254 59.1
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 1.2e-75 287.3 255 57.6
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 2.0e-75 286.6 252 58.7
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 2.6e-75 286.2 247 57.1
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 2.2e-74 283.1 256 57.8
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 2.2e-74 283.1 258 56.6
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 4.9e-74 282.0 248 58.5
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 1.1e-73 280.8 251 57.4
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 2.4e-73 279.6 255 57.6
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 3.2e-73 279.3 251 57.4
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 4.2e-73 278.9 263 56.3
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 5.4e-73 278.5 255 56.5
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 9.3e-73 277.7 248 57.7
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 1.2e-72 277.3 251 58.2
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 1.6e-72 276.9 248 57.7
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 1.6e-72 276.9 262 56.5
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 2.1e-72 276.6 255 55.3
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 2.7e-72 276.2 252 54.4
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 3.5e-72 275.8 249 58.2
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 4.6e-72 275.4 253 56.1
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 7.9e-72 274.6 253 55.7
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 3.0e-71 272.7 264 53.0
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 3.9e-71 272.3 258 53.9
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 3.9e-71 272.3 264 54.2
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 5.1e-71 271.9 263 52.9
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 5.1e-71 271.9 255 54.9
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 5.1e-71 271.9 252 57.5
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 5.1e-71 271.9 227 63.0
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 8.7e-71 271.2 218 62.4
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 8.7e-71 271.2 264 52.7
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 8.7e-71 271.2 264 52.7
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 8.7e-71 271.2 253 54.2
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 1.1e-70 270.8 253 54.5
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 2.5e-70 269.6 253 54.5
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 2.5e-70 269.6 251 57.8
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 4.3e-70 268.9 249 54.6
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 5.6e-70 268.5 241 58.5
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 1.3e-69 267.3 248 55.2
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 1.3e-69 267.3 261 53.3
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 3.6e-69 265.8 253 55.7
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 3.6e-69 265.8 255 53.3
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 4.8e-69 265.4 249 55.0
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 1.4e-68 263.8 267 53.2
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 1.4e-68 263.8 292 50.7
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 2.4e-68 263.1 246 54.5
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.4e-68 263.1 263 54.4
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 3.1e-68 262.7 330 47.6
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 4.0e-68 262.3 261 53.3
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 9.0e-68 261.2 263 54.4
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 3.4e-67 259.2 238 57.1
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 7.6e-67 258.1 263 53.6
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 2.2e-66 256.5 244 54.1
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 2.2e-66 256.5 244 54.1
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 2.9e-66 256.1 253 53.4
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 9.3e-65 251.1 272 49.3
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 2.1e-64 250.0 255 54.5
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 2.3e-63 246.5 244 53.3
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 6.7e-63 245.0 259 51.7
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 1.5e-62 243.8 211 61.1
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 1.6e-61 240.4 218 58.7
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 1.5e-59 233.8 221 53.8
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 3.4e-59 232.6 232 55.2
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 1.2e-56 224.2 256 48.0
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 5.1e-55 218.8 244 48.8
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 8.7e-55 218.0 191 56.5
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 1.3e-50 204.1 223 52.0
unitig_93.g30708 Utricularia gibba HOM05D006609 ORTHO05D008551 1.9e-49 200.3 242 48.8
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 3.3e-46 189.5 169 54.4
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 2.8e-45 186.4 169 55.0
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 1.4e-41 174.1 151 57.6
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 5.5e-41 172.2 136 65.4
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 1.2e-35 154.5 137 62.0
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 8.5e-34 148.3 109 65.1
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.0e-27 127.1 116 56.0
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.0e-27 127.1 116 56.0
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 1.5e-22 110.9 205 33.2
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.6e-19 100.9 104 51.9
HanXRQChr16g0519661 Helianthus annuus HOM05D006609 ORTHO05D008551 3.8e-18 96.3 128 44.5
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 8.0e-16 88.6 92 54.3
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 2.3e-15 87.0 154 30.5
QL09p008974 Quercus lobata HOM05D006609 ORTHO05D008551 2.6e-14 83.6 90 52.2
PRCOL_00006038 Prasinoderma coloniale HOM05D006609 ORTHO05D008551 1.3e-13 81.3 198 28.3
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 2.2e-13 80.5 98 44.9
Cre10.g426400 Chlamydomonas reinhardtii HOM05D006609 ORTHO05D008551 1.5e-09 67.8 247 23.9


User provided reference genes

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