Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.25675 Avicennia marina HOM05D007727 ORTHO05D009078 8.4e-73 276.9 141 100.0
Oeu031672.1 Olea europaea HOM05D007727 ORTHO05D009078 7.7e-18 94.4 105 53.3
Dinv38830 Davidia involucrata HOM05D007727 ORTHO05D009078 4.2e-16 88.6 102 53.9
Oeu031673.1 Olea europaea HOM05D007727 ORTHO05D009078 1.2e-15 87.0 106 51.9
CSS0019090 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 1.6e-15 86.7 111 45.9
Glyma.11G017500 Glycine max HOM05D007727 ORTHO05D009078 6.1e-15 84.7 110 50.9
Hma1.2p1_1746F.1_g300420 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 7.9e-15 84.3 140 35.7
Glyma.01G225500 Glycine max HOM05D007727 ORTHO05D009078 1.1e-13 80.5 108 49.1
CSS0050195 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 2.0e-13 79.7 109 44.0
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 3.3e-13 79.0 106 48.1
Hma1.2p1_1461F.1_g285070 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 5.7e-13 78.2 111 41.4
Hma1.2p1_1461F.1_g285060 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 7.4e-13 77.8 57 61.4
Hma1.2p1_2808F.1_g328866 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 7.4e-13 77.8 57 61.4
LjContig00312_ERROPOS870357g0016151 Lotus japonicus HOM05D007727 ORTHO05D009078 7.4e-13 77.8 106 50.0
VMungo1215G2373 Vigna mungo HOM05D007727 ORTHO05D009078 9.7e-13 77.4 106 50.0
Glyma.05G216900 Glycine max HOM05D007727 ORTHO05D009078 1.3e-12 77.0 116 42.2
Rhsim02G0243700 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.3e-12 77.0 108 40.7
CiPaw.12G082800 Carya illinoinensis HOM05D007727 ORTHO05D009078 1.7e-12 76.6 108 51.9
Nitab4.5_0001210g0030 Nicotiana tabacum HOM05D011491 ORTHO05D009078 1.7e-12 76.6 107 44.9
COL.COLO4_10705 Corchorus olitorius HOM05D007727 ORTHO05D009078 2.2e-12 76.3 135 40.0
Gohir.A02G100000 Gossypium hirsutum HOM05D007727 ORTHO05D009078 4.8e-12 75.1 58 63.8
Potri.001G091400 Populus trichocarpa HOM05D007727 ORTHO05D009078 6.3e-12 74.7 104 49.0
Glyma.08G023200 Glycine max HOM05D007727 ORTHO05D009078 8.2e-12 74.3 114 43.9
Gohir.D03G083800 Gossypium hirsutum HOM05D007727 ORTHO05D009078 8.2e-12 74.3 96 45.8
Gorai.003G078900 Gossypium raimondii HOM05D007727 ORTHO05D009078 8.2e-12 74.3 96 45.8
Potri.004G151000 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.1e-11 73.9 103 45.6
Rhsim02G0243900 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.4e-11 73.6 109 43.1
Rhsim02G0244000 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.4e-11 73.6 83 50.6
Medtr5g009290 Medicago truncatula HOM05D007727 ORTHO05D009078 1.8e-11 73.2 108 43.5
Rhsim02G0243600 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.8e-11 73.2 105 43.8
Duzib205G0888 Durio zibethinus HOM05D007727 ORTHO05D009078 2.4e-11 72.8 113 45.1
Nitab4.5_0002782g0050 Nicotiana tabacum HOM05D011491 ORTHO05D009078 2.4e-11 72.8 104 42.3
Potri.003G140200 Populus trichocarpa HOM05D007727 ORTHO05D009078 2.4e-11 72.8 109 43.1
Potri.003G140233 Populus trichocarpa HOM05D007727 ORTHO05D009078 2.4e-11 72.8 109 43.1
Potri.003G140266 Populus trichocarpa HOM05D007727 ORTHO05D009078 2.4e-11 72.8 109 43.1
Prupe.5G120300 Prunus persica HOM05D007727 ORTHO05D009078 2.4e-11 72.8 103 43.7
QL02p030408 Quercus lobata HOM05D007727 ORTHO05D009078 2.4e-11 72.8 127 38.6
Phvul.002G298600 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 4.1e-11 72.0 107 44.9
CiPaw.12G082600 Carya illinoinensis HOM05D007727 ORTHO05D009078 5.3e-11 71.6 108 49.1
PGSC0003DMG400012146 Solanum tuberosum HOM05D011491 ORTHO05D009078 5.3e-11 71.6 118 42.4
QL02p030393 Quercus lobata HOM05D007727 ORTHO05D009078 7.0e-11 71.2 127 38.6
Rhsim02G0243800 Rhododendron simsii HOM05D007727 ORTHO05D009078 7.0e-11 71.2 101 43.6
Phvul.002G298200 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 9.1e-11 70.9 105 44.8
Sabra01G0067800 Salix brachista HOM05D007727 ORTHO05D009078 9.1e-11 70.9 91 51.6
Ciclev10022327m.g Citrus clementina HOM05D007727 ORTHO05D009078 2.0e-10 69.7 102 45.1
Eucgr.D01744 Eucalyptus grandis HOM05D007727 ORTHO05D009078 2.0e-10 69.7 99 47.5
Gorai.004G133300 Gossypium raimondii HOM05D007727 ORTHO05D009078 2.0e-10 69.7 116 44.8
Nitab4.5_0002782g0020 Nicotiana tabacum HOM05D011491 ORTHO05D009078 2.0e-10 69.7 100 46.0
Gohir.D08G130400 Gossypium hirsutum HOM05D007727 ORTHO05D009078 2.6e-10 69.3 116 44.8
TPR.G25603 Trifolium pratense HOM05D007727 ORTHO05D009078 2.6e-10 69.3 112 44.6
Haze_09065 Corylus avellana HOM05D007727 ORTHO05D009078 3.5e-10 68.9 113 43.4
Sabra01G0067700 Salix brachista HOM05D007727 ORTHO05D009078 3.5e-10 68.9 90 51.1
Thecc.03G298300 Theobroma cacao HOM05D007727 ORTHO05D009078 3.5e-10 68.9 129 38.8
Cfa012009 Carpinus fangiana HOM05D007727 ORTHO05D009078 5.9e-10 68.2 109 41.3
Eucgr.D01742 Eucalyptus grandis HOM05D007727 ORTHO05D009078 5.9e-10 68.2 52 63.5
Gohir.A08G103450 Gossypium hirsutum HOM05D007727 ORTHO05D009078 5.9e-10 68.2 106 44.3
QL02p030384 Quercus lobata HOM05D007727 ORTHO05D009078 7.7e-10 67.8 106 43.4
Glyma.08G022800 Glycine max HOM05D007727 ORTHO05D009078 1.0e-09 67.4 118 43.2
Lalb_Chr05g0224131 Lupinus albus HOM05D007727 ORTHO05D009078 1.0e-09 67.4 115 41.7
Sopen08g030640 Solanum pennellii HOM05D011491 ORTHO05D009078 1.0e-09 67.4 50 66.0
CiPaw.11G121100 Carya illinoinensis HOM05D007727 ORTHO05D009078 1.3e-09 67.0 114 42.1
Lj4g0015473 Lotus japonicus HOM05D007727 ORTHO05D009078 1.7e-09 66.6 111 46.8
PGSC0003DMG400012147 Solanum tuberosum HOM05D011491 ORTHO05D009078 1.7e-09 66.6 118 39.8
Cfa012003 Carpinus fangiana HOM05D007727 ORTHO05D009078 2.2e-09 66.2 107 42.1
Cfa012008 Carpinus fangiana HOM05D007727 ORTHO05D009078 2.2e-09 66.2 107 42.1
Haze_09064 Corylus avellana HOM05D007727 ORTHO05D009078 2.2e-09 66.2 107 40.2
QL02p030389 Quercus lobata HOM05D007727 ORTHO05D009078 2.2e-09 66.2 106 40.6
Peaxi162Scf00074g00092 Petunia axillaris HOM05D011491 ORTHO05D009078 3.8e-09 65.5 108 42.6
CANSAT21G1217 Cannabis sativa HOM05D007727 ORTHO05D009078 5.0e-09 65.1 44 70.5
TPR.G3394 Trifolium pratense HOM05D007727 ORTHO05D009078 5.0e-09 65.1 122 32.8
Manes.02G009800 Manihot esculenta HOM05D007727 ORTHO05D009078 1.1e-08 63.9 102 43.1
CAN.G1804.6 Capsicum annuum HOM05D011491 ORTHO05D009078 1.5e-08 63.5 118 35.6
VMungo0251G2989 Vigna mungo HOM05D007727 ORTHO05D009078 1.9e-08 63.2 104 45.2
TPR.G11121 Trifolium pratense HOM05D007727 ORTHO05D009078 2.5e-08 62.8 125 32.0
CAN.G1804.7 Capsicum annuum HOM05D011491 ORTHO05D009078 4.2e-08 62.0 118 35.6
FAN13G2104 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.2e-08 62.0 113 42.5
FAN13G3265 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.2e-08 62.0 113 42.5
PGSC0003DMG400012144 Solanum tuberosum HOM05D011491 ORTHO05D009078 5.5e-08 61.6 109 41.3
MSTRG.25674 Avicennia marina HOM05D007727 ORTHO05D009078 7.2e-08 61.2 134 35.8
FvH4_5g04620 Fragaria vesca HOM05D007727 ORTHO05D009078 7.2e-08 61.2 42 66.7
FAN18G0179 Fragaria x ananassa HOM05D007727 ORTHO05D009078 7.2e-08 61.2 42 66.7
FAN18G4426 Fragaria x ananassa HOM05D007727 ORTHO05D009078 7.2e-08 61.2 42 66.7
PGSC0003DMG400012145 Solanum tuberosum HOM05D011491 ORTHO05D009078 7.2e-08 61.2 114 36.0
Glyma.05G217200 Glycine max HOM05D007727 ORTHO05D009078 9.4e-08 60.8 104 40.4
Eucgr.D01747 Eucalyptus grandis HOM05D007727 ORTHO05D009078 2.1e-07 59.7 89 43.8
FAN08G2749 Fragaria x ananassa HOM05D007727 ORTHO05D009078 3.6e-07 58.9 42 64.3
AUR62010842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 4.7e-07 58.5 47 51.1
AUR62019842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 4.7e-07 58.5 48 47.9
FAN04G2059 Fragaria x ananassa HOM05D007727 ORTHO05D009078 4.7e-07 58.5 101 42.6
Medtr8g099485 Medicago truncatula HOM05D007727 ORTHO05D009078 4.7e-07 58.5 96 37.5
TPR.G3425 Trifolium pratense HOM05D007727 ORTHO05D009078 4.7e-07 58.5 95 34.7
ECA240G1351 Erigeron canadensis HOM05D007727 ORTHO05D009078 1.0e-06 57.4 109 36.7
Psat2g185360 Pisum sativum HOM05D007727 ORTHO05D009078 1.0e-06 57.4 112 39.3
TPR.G3415 Trifolium pratense HOM05D007727 ORTHO05D009078 1.0e-06 57.4 99 36.4
Sed0000706 Sechium edule HOM05D007727 ORTHO05D009078 1.4e-06 57.0 107 37.4
Solyc08g082380.1 Solanum lycopersicum HOM05D011491 ORTHO05D009078 1.4e-06 57.0 135 34.8
Nitab4.5_0009000g0010 Nicotiana tabacum HOM05D011491 ORTHO05D009078 2.3e-06 56.2 79 40.5
Lj4g0008549 Lotus japonicus HOM05D007727 ORTHO05D009078 3.0e-06 55.8 114 38.6
Peaxi162Scf00074g00091 Petunia axillaris HOM05D011491 ORTHO05D009078 3.0e-06 55.8 112 41.1
ClCG07G011610 Citrullus lanatus HOM05D007727 ORTHO05D009078 5.2e-06 55.1 105 37.1


User provided reference genes

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