Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 4.1e-275 951.0 584 100.0
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 4.5e-181 638.6 588 70.1
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 4.6e-149 532.3 558 65.4
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 1.4e-145 520.8 603 61.0
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 7.1e-142 508.4 578 64.0
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 4.7e-138 495.7 599 56.9
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 2.4e-137 493.4 577 63.8
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 4.0e-137 492.7 613 59.5
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 7.6e-136 488.4 599 54.1
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 6.4e-135 485.3 575 62.4
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 4.2e-134 482.6 576 62.0
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.4e-129 467.6 615 58.2
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 1.8e-129 467.2 572 59.4
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 3.8e-127 459.5 575 61.2
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 3.8e-127 459.5 571 58.5
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 2.1e-125 453.8 573 61.6
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 1.0e-124 451.4 592 52.5
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 1.0e-124 451.4 577 59.8
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 2.5e-123 446.8 576 59.4
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 2.4e-121 440.3 576 58.9
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.0e-120 437.2 608 51.3
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 9.9e-120 434.9 608 52.8
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.7e-119 434.1 590 48.5
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 2.2e-119 433.7 576 59.9
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 8.4e-119 431.8 594 44.1
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 4.2e-118 429.5 613 55.6
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 7.1e-118 428.7 580 57.6
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 9.3e-118 428.3 579 58.2
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 1.6e-117 427.6 568 49.1
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 2.7e-117 426.8 586 58.2
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 2.7e-117 426.8 578 57.8
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 3.5e-117 426.4 578 54.2
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 4.6e-117 426.0 574 56.8
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 1.3e-116 424.5 601 56.1
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 3.0e-116 423.3 573 57.2
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 5.1e-116 422.5 593 50.4
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 3.3e-115 419.9 577 51.5
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 1.3e-114 417.9 576 57.8
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 3.7e-114 416.4 579 57.3
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 1.4e-113 414.5 576 56.9
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 1.4e-113 414.5 586 57.7
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 1.8e-113 414.1 576 51.0
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 1.5e-112 411.0 595 57.5
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 2.0e-112 410.6 577 57.2
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 2.0e-112 410.6 576 51.9
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 1.1e-110 404.8 573 55.8
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 2.5e-110 403.7 578 57.1
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 4.2e-110 402.9 552 57.4
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 4.6e-109 399.4 588 56.5
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 4.3e-107 392.9 572 54.4
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.6e-106 391.0 604 48.7
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 9.0e-105 385.2 575 49.4
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 1.7e-103 380.9 522 56.3
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 3.8e-103 379.8 509 58.2
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 6.5e-103 379.0 578 52.4
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 2.5e-102 377.1 613 47.3
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 6.1e-101 372.5 518 57.5
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 3.9e-100 369.8 575 51.8
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 3.3e-99 366.7 578 53.8
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 7.4e-99 365.5 592 52.9
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 2.2e-98 364.0 358 68.2
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 6.3e-98 362.5 517 58.4
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 1.4e-97 361.3 474 62.4
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 5.3e-97 359.4 576 50.7
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 2.6e-96 357.1 573 52.7
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 2.6e-96 357.1 581 51.6
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 2.6e-96 357.1 581 51.6
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 4.5e-96 356.3 580 53.1
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 2.1e-93 347.4 593 51.6
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 4.6e-93 346.3 577 51.1
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 4.6e-93 346.3 577 51.1
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 1.8e-92 344.4 577 50.8
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 5.1e-92 342.8 497 59.0
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 6.7e-92 342.4 386 60.6
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 5.7e-91 339.3 577 50.8
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 1.4e-89 334.7 571 52.2
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 4.5e-88 329.7 579 51.1
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 8.5e-87 325.5 571 51.7
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 7.2e-86 322.4 577 49.7
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 4.1e-81 306.6 575 43.0
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 4.1e-81 306.6 575 43.0
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 1.2e-80 305.1 589 48.9
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 2.7e-77 293.9 583 48.0
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 8.8e-76 288.9 471 56.7
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 1.7e-74 284.6 602 40.4
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 2.4e-73 280.8 578 45.7
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 9.1e-73 278.9 551 51.2
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 1.6e-72 278.1 513 43.5
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 1.0e-71 275.4 572 40.6
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 6.5e-71 272.7 580 47.8
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 6.5e-71 272.7 600 30.2
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 1.8e-68 264.6 580 46.9
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 2.3e-68 264.2 579 47.3
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 9.8e-67 258.8 574 38.0
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 4.8e-66 256.5 581 41.3
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 1.1e-65 255.4 579 46.1
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 3.1e-65 253.8 527 49.1
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 3.5e-64 250.4 575 45.0
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 1.7e-63 248.1 518 42.5
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 9.4e-62 242.3 571 43.6
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 4.1e-57 226.9 366 52.2
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 2.1e-53 214.5 581 44.1
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 1.2e-51 208.8 495 39.6
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 2.9e-50 204.1 448 51.3
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 5.1e-31 140.2 307 33.9
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 8.1e-29 132.9 157 48.4
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 2.2e-26 124.8 209 47.8
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 2.1e-21 108.2 150 49.3
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 6.2e-21 106.7 200 56.5
Hma1.2p1_0450F.1_g155520 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 2.4e-17 94.7 176 36.4
Hma1.2p1_0082F.1_g042550 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 7.8e-16 89.7 62 72.6
Hma1.2p1_1530F.1_g289190 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 1.5e-14 85.5 62 67.7
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 1.5e-06 58.9 48 62.5
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 4.3e-06 57.4 48 60.4


User provided reference genes

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