Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.2538 Avicennia marina HOM05D007384 ORTHO05D008511 4.2e-59 231.5 147 100.0
MSTRG.23314 Avicennia marina HOM05D007384 ORTHO05D008511 3.2e-35 152.1 150 57.3
Oeu056489.1 Olea europaea HOM05D007384 ORTHO05D008511 1.8e-22 109.8 154 40.3
Oeu028527.1 Olea europaea HOM05D007384 ORTHO05D008511 7.7e-21 104.4 150 44.0
Oeu056487.1 Olea europaea HOM05D007384 ORTHO05D008511 7.7e-21 104.4 152 39.5
SGA_v2.0_scaffold2G01297 Striga asiatica HOM05D007384 ORTHO05D008511 7.7e-21 104.4 147 60.5
Oeu028378.1 Olea europaea HOM05D007384 ORTHO05D008511 3.8e-20 102.1 158 44.9
Oeu028376.1 Olea europaea HOM05D007384 ORTHO05D008511 1.5e-19 100.1 158 44.9
SalBow5G4202 Salvia bowleyana HOM05D007384 ORTHO05D008511 1.5e-19 100.1 150 40.7
SalBow5G0260 Salvia bowleyana HOM05D007384 ORTHO05D008511 1.9e-19 99.8 149 40.3
SGA_v2.0_scaffold47G17711 Striga asiatica HOM05D007384 ORTHO05D008511 1.2e-18 97.1 152 52.6
SalBow6G3892 Salvia bowleyana HOM05D007384 ORTHO05D008511 1.4e-14 83.6 147 40.8
Migut.L00076 Erythranthe guttata HOM05D007384 ORTHO05D008511 7.0e-14 81.3 146 55.5
Peaxi162Scf00323g00037 Petunia axillaris HOM05D007384 ORTHO05D008511 3.5e-13 79.0 165 33.9
Dinv42700 Davidia involucrata HOM05D007384 ORTHO05D008511 5.9e-13 78.2 169 33.1
Dinv19495 Davidia involucrata HOM05D007384 ORTHO05D008511 7.8e-13 77.8 170 34.7
Rhsim10G0013800 Rhododendron simsii HOM05D007384 ORTHO05D008511 5.0e-12 75.1 151 49.7
Lsat_1_v5_gn_2_65360 Lactuca sativa HOM05D007384 ORTHO05D008511 8.6e-12 74.3 163 30.7
PGSC0003DMG400012958 Solanum tuberosum HOM05D007384 ORTHO05D008511 8.6e-12 74.3 152 31.6
Cc07_g16090 Coffea canephora HOM05D007384 ORTHO05D008511 1.9e-11 73.2 157 33.1
Solyc04g053145.1 Solanum lycopersicum HOM05D007384 ORTHO05D008511 4.3e-11 72.0 152 40.1
Sopen04g023570 Solanum pennellii HOM05D007384 ORTHO05D008511 4.3e-11 72.0 152 39.5
DCAR_001367 Daucus carota HOM05D007384 ORTHO05D008511 3.6e-10 68.9 152 49.3
Thecc.01G112100 Theobroma cacao HOM05D007384 ORTHO05D008511 3.6e-10 68.9 158 29.7
Nitab4.5_0000471g0140 Nicotiana tabacum HOM05D007384 ORTHO05D008511 4.0e-09 65.5 159 46.5
CANSAT01G1949 Cannabis sativa HOM05D007384 ORTHO05D008511 5.2e-09 65.1 166 47.6
Glyma.05G183400 Glycine max HOM05D007384 ORTHO05D008511 8.9e-09 64.3 152 31.6
Glyma.08G141200 Glycine max HOM05D007384 ORTHO05D008511 1.2e-08 63.9 158 30.4
HanXRQChr10g0295241 Helianthus annuus HOM05D007384 ORTHO05D008511 1.2e-08 63.9 142 29.6
Rhsim08G0006700 Rhododendron simsii HOM05D007384 ORTHO05D008511 2.0e-08 63.2 168 44.0
VMungo0251G1085 Vigna mungo HOM05D007384 ORTHO05D008511 2.0e-08 63.2 147 32.0
Gohir.A10G086700 Gossypium hirsutum HOM05D007384 ORTHO05D008511 4.4e-08 62.0 162 34.6
Lj4g0022190 Lotus japonicus HOM05D007384 ORTHO05D008511 4.4e-08 62.0 151 39.1
Lj4g0025402 Lotus japonicus HOM05D007384 ORTHO05D008511 4.4e-08 62.0 151 39.1
Gorai.011G111700 Gossypium raimondii HOM05D007384 ORTHO05D008511 7.5e-08 61.2 160 34.4
Potri.005G083900 Populus trichocarpa HOM05D007384 ORTHO05D008511 1.3e-07 60.5 166 32.5
RcHm_v2.0_Chr2g0116341 Rosa chinensis HOM05D007384 ORTHO05D008511 1.7e-07 60.1 149 34.2
unitig_736.g22624 Utricularia gibba HOM05D007384 ORTHO05D008511 1.7e-07 60.1 148 29.1
Duzib187G0804 Durio zibethinus HOM05D007384 ORTHO05D008511 2.9e-07 59.3 145 33.1
Hund03542 Selenicereus undatus HOM05D007384 ORTHO05D008511 2.9e-07 59.3 162 29.0
FAN19G0612 Fragaria x ananassa HOM05D007384 ORTHO05D008511 4.9e-07 58.5 152 32.9
FvH4_1g22200 Fragaria vesca HOM05D007384 ORTHO05D008511 6.4e-07 58.2 152 32.9
FAN23G2853 Fragaria x ananassa HOM05D007384 ORTHO05D008511 6.4e-07 58.2 152 32.9
MD01G1019000 Malus domestica HOM05D007384 ORTHO05D008511 8.3e-07 57.8 148 37.2
Manes.13G077680 Manihot esculenta HOM05D007384 ORTHO05D008511 1.4e-06 57.0 163 36.2
Sabra05G0069000 Salix brachista HOM05D007384 ORTHO05D008511 1.4e-06 57.0 159 28.3
TPR.G40723 Trifolium pratense HOM05D007384 ORTHO05D008511 2.4e-06 56.2 142 31.7
TWI77G0698 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 2.4e-06 56.2 158 29.1
Atru.chr4.403 Acer truncatum HOM05D007384 ORTHO05D008511 5.4e-06 55.1 155 45.2
Phvul.002G264500 Phaseolus vulgaris HOM05D007384 ORTHO05D008511 7.0e-06 54.7 150 39.3
Sc07g0001520 Simmondsia chinensis HOM05D007384 ORTHO05D008511 7.0e-06 54.7 142 30.3


User provided reference genes

Program Settings