Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 8.6e-58 226.9 122 100.0
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 2.3e-50 202.2 122 84.4
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 3.9e-50 201.4 122 84.4
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 5.0e-50 201.1 122 84.4
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 6.6e-50 200.7 120 85.8
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 3.3e-49 198.4 122 83.6
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 4.3e-49 198.0 120 83.3
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 4.3e-49 198.0 120 83.3
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 5.6e-49 197.6 121 83.5
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 5.6e-49 197.6 122 82.8
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 7.3e-49 197.2 122 82.8
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 9.5e-49 196.8 122 82.8
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 9.5e-49 196.8 122 83.6
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.2e-48 196.4 120 82.5
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 3.6e-48 194.9 120 83.3
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 3.6e-48 194.9 122 81.1
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 4.7e-48 194.5 120 85.0
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 8.0e-48 193.7 122 82.8
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 1.1e-47 193.4 122 81.1
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 1.1e-47 193.4 120 82.5
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 1.1e-47 193.4 120 81.7
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.8e-47 192.6 120 82.5
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 2.3e-47 192.2 120 81.7
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 3.1e-47 191.8 122 82.0
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 3.1e-47 191.8 120 80.8
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 3.1e-47 191.8 120 81.7
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 4.0e-47 191.4 120 81.7
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 4.0e-47 191.4 120 82.5
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 5.2e-47 191.0 120 82.5
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 5.2e-47 191.0 120 81.7
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 5.2e-47 191.0 122 80.3
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 6.8e-47 190.7 120 80.8
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 6.8e-47 190.7 120 79.2
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 8.9e-47 190.3 120 81.7
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 8.9e-47 190.3 120 83.3
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 1.2e-46 189.9 119 82.4
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 1.2e-46 189.9 120 80.8
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 1.5e-46 189.5 120 79.2
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 1.5e-46 189.5 122 82.0
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 2.0e-46 189.1 120 80.8
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 2.6e-46 188.7 120 80.0
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 2.6e-46 188.7 121 78.5
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 3.4e-46 188.3 122 78.7
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 4.4e-46 188.0 120 80.0
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 4.4e-46 188.0 120 80.8
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 4.4e-46 188.0 122 82.0
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 4.4e-46 188.0 120 79.2
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 5.8e-46 187.6 120 79.2
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 5.8e-46 187.6 122 78.7
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 9.8e-46 186.8 120 79.2
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.7e-45 186.0 120 80.0
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 2.2e-45 185.7 122 77.9
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 3.7e-45 184.9 120 79.2
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 3.7e-45 184.9 120 77.5
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 3.7e-45 184.9 120 79.2
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 3.7e-45 184.9 120 80.0
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 4.9e-45 184.5 120 79.2
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 4.9e-45 184.5 120 79.2
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 4.9e-45 184.5 120 78.3
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 6.4e-45 184.1 120 78.3
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 6.4e-45 184.1 120 80.0
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 8.3e-45 183.7 120 78.3
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.1e-44 183.3 120 78.3
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 1.1e-44 183.3 120 78.3
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 1.1e-44 183.3 120 81.7
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 2.4e-44 182.2 120 77.5
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 3.2e-44 181.8 120 76.7
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 4.1e-44 181.4 123 75.6
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 4.1e-44 181.4 123 75.6
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 7.1e-44 180.6 120 77.5
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 7.1e-44 180.6 120 75.0
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 1.6e-43 179.5 120 76.7
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 2.7e-43 178.7 108 84.3
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 7.8e-43 177.2 120 75.8
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 7.8e-43 177.2 120 75.0
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 7.8e-43 177.2 120 75.8
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 2.3e-42 175.6 122 73.0
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 2.3e-42 175.6 120 74.2
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 3.0e-42 175.3 113 79.6
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 8.6e-42 173.7 121 75.2
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 8.6e-42 173.7 120 76.7
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 2.5e-41 172.2 120 75.0
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 3.3e-41 171.8 120 74.2
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 9.5e-41 170.2 120 73.3
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 9.5e-41 170.2 120 73.3
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 1.2e-40 169.9 120 74.2
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 1.2e-40 169.9 120 74.2
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 1.2e-40 169.9 135 68.1
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 2.1e-40 169.1 120 74.2
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 2.1e-40 169.1 121 73.6
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 2.1e-40 169.1 120 72.5
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 2.8e-40 168.7 120 74.2
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 2.8e-40 168.7 120 75.0
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 4.7e-40 167.9 170 57.1
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 5.2e-39 164.5 120 71.7
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 6.8e-39 164.1 148 63.5
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 1.2e-38 163.3 116 73.3
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 1.2e-38 163.3 116 73.3
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 2.0e-38 162.5 117 71.8
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 2.0e-38 162.5 131 65.6
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 3.4e-38 161.8 115 73.0
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 4.4e-38 161.4 119 73.1
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 4.4e-38 161.4 119 73.1
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 1.3e-37 159.8 120 70.0
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 8.3e-37 157.1 119 68.1
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 3.2e-36 155.2 120 68.3
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 3.2e-36 155.2 116 68.1
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 1.0e-34 150.2 119 62.2
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.0e-34 150.2 91 82.4
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 3.9e-34 148.3 91 83.5
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 8.6e-34 147.1 91 82.4
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 1.5e-33 146.4 115 63.5
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 1.5e-33 146.4 94 81.9
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 1.6e-32 142.9 104 70.2
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 6.8e-31 137.5 101 71.3
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 5.4e-28 127.9 91 73.6
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 1.3e-24 116.7 70 81.4
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 2.1e-24 115.9 126 57.1
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 9.0e-23 110.5 69 81.2
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 6.4e-21 104.4 64 78.1
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 1.8e-15 86.3 52 90.4
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.2e-14 83.6 58 77.6
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.5e-14 83.2 46 84.8
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 5.1e-10 68.2 52 73.1
QL05p046423 Quercus lobata HOM05D006317 ORTHO05D007852 4.3e-09 65.1 51 62.7
FAN15G1039 Fragaria x ananassa HOM05D006317 ORTHO05D007852 7.4e-09 64.3 37 75.7


User provided reference genes

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