Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.25340 Avicennia marina HOM05D004728 ORTHO05D002375 3.0e-132 475.3 260 100.0
SalBow7G1327 Salvia bowleyana HOM05D004728 ORTHO05D002375 1.4e-41 174.1 218 51.4
Migut.C01096 Erythranthe guttata HOM05D004728 ORTHO05D002375 2.6e-27 126.7 188 48.4
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 7.3e-22 108.6 185 43.8
Oeu000784.1 Olea europaea HOM05D004728 ORTHO05D002375 1.0e-20 104.8 186 46.8
Oeu045992.1 Olea europaea HOM05D004728 ORTHO05D002375 2.3e-20 103.6 195 47.7
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 3.4e-19 99.8 145 49.7
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 3.7e-18 96.3 145 49.7
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 6.4e-18 95.5 148 47.3
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 5.4e-17 92.4 198 41.4
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 7.0e-17 92.0 203 40.9
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.0e-16 90.5 191 41.4
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 4.6e-16 89.4 174 40.2
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 1.3e-15 87.8 218 31.7
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 2.3e-15 87.0 187 39.0
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 3.9e-15 86.3 192 41.7
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 8.6e-15 85.1 133 48.1
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 1.2e-13 81.3 126 48.4
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 2.1e-13 80.5 184 40.8
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 2.8e-13 80.1 148 44.6
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 3.6e-13 79.7 191 28.3
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 4.7e-13 79.3 136 44.9
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 6.2e-13 79.0 154 44.2
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 6.2e-13 79.0 128 47.7
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 8.0e-13 78.6 125 36.0
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 1.4e-12 77.8 199 34.2
SGA_v2.0_scaffold52G18993 Striga asiatica HOM05D004728 ORTHO05D002375 1.4e-12 77.8 198 40.9
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 1.8e-12 77.4 167 33.5
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 5.2e-12 75.9 190 38.9
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 6.8e-12 75.5 168 39.9
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.5e-11 74.3 156 44.2
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.5e-11 74.3 139 47.5
SGA_v2.0_scaffold24G10482 Striga asiatica HOM05D004728 ORTHO05D002375 2.6e-11 73.6 158 41.8
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 3.4e-11 73.2 145 37.2
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 3.4e-11 73.2 149 42.3
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 7.5e-11 72.0 145 40.7
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 2.2e-10 70.5 206 35.9
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 2.9e-10 70.1 145 41.4
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 2.9e-10 70.1 172 37.8
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 3.7e-10 69.7 137 44.5
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 4.9e-10 69.3 161 30.4
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 4.9e-10 69.3 152 38.8
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 6.4e-10 68.9 188 38.3
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 6.4e-10 68.9 152 36.2
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 8.3e-10 68.6 152 36.2
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 1.1e-09 68.2 146 41.1
Lsat_1_v5_gn_1_2840 Lactuca sativa HOM05D004728 ORTHO05D002375 1.1e-09 68.2 125 44.8
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 1.1e-09 68.2 136 41.2
Rhsim07G0205400 Rhododendron simsii HOM05D004728 ORTHO05D002375 1.1e-09 68.2 125 44.0
unitig_747.g21502 Utricularia gibba HOM05D004728 ORTHO05D002375 1.1e-09 68.2 120 45.8
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.9e-09 67.4 135 39.3
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.9e-09 67.4 152 36.2
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 2.4e-09 67.0 112 48.2
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 3.2e-09 66.6 165 37.6
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 4.1e-09 66.2 124 31.5
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 5.4e-09 65.9 157 38.9
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.4e-09 65.9 137 38.7
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 5.4e-09 65.9 190 35.8
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 7.0e-09 65.5 118 42.4
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 7.0e-09 65.5 118 39.8
Hund26995 Selenicereus undatus HOM05D004728 ORTHO05D002375 9.2e-09 65.1 160 40.6
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 1.2e-08 64.7 143 39.9
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 1.2e-08 64.7 138 42.8
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 1.2e-08 64.7 138 40.6
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 2.1e-08 63.9 116 33.6
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 2.1e-08 63.9 116 33.6
Lsat_1_v5_gn_1_2860 Lactuca sativa HOM05D004728 ORTHO05D002375 2.1e-08 63.9 186 33.3
Lsat_1_v5_gn_1_2940 Lactuca sativa HOM05D004728 ORTHO05D002375 3.5e-08 63.2 175 31.4
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 3.5e-08 63.2 177 34.5
Lj4A95G11 Lonicera japonica HOM05D004728 ORTHO05D002375 4.6e-08 62.8 94 47.9
AUR62027821 Chenopodium quinoa HOM05D059013 ORTHO05D002375 7.8e-08 62.0 125 32.0
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 7.8e-08 62.0 118 41.5
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.3e-07 61.2 150 38.7
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.3e-07 61.2 147 40.8
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.7e-07 60.8 140 42.1
HanXRQChr17g0556291 Helianthus annuus HOM05D004728 ORTHO05D002375 1.7e-07 60.8 182 30.2
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 2.3e-07 60.5 139 43.2
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 2.3e-07 60.5 133 40.6
Sabra02G0079600 Salix brachista HOM05D004728 ORTHO05D002375 2.3e-07 60.5 162 36.4
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 2.3e-07 60.5 152 38.2
vmacro04704 Vaccinium macrocarpon HOM05D004728 ORTHO05D002375 2.3e-07 60.5 160 39.4
ECA247G0078 Erigeron canadensis HOM05D004728 ORTHO05D002375 6.6e-07 58.9 148 38.5
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 6.6e-07 58.9 109 43.1
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 8.6e-07 58.5 128 43.0
arahy.Tifrunner.gnm1.ann1.30DIRF Arachis hypogaea HOM05D012119 ORTHO05D002375 1.5e-06 57.8 141 40.4
Glyma.02G210100 Glycine max HOM05D012119 ORTHO05D002375 1.5e-06 57.8 146 30.8
Potri.002G101500 Populus trichocarpa HOM05D004728 ORTHO05D002375 1.5e-06 57.8 167 34.7
Eucgr.F00382 Eucalyptus grandis HOM05D004728 ORTHO05D002375 1.9e-06 57.4 100 47.0
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 1.9e-06 57.4 115 41.7
PGSC0003DMG400030843 Solanum tuberosum HOM05D021150 ORTHO05D002375 2.5e-06 57.0 125 40.0
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 3.3e-06 56.6 151 38.4
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 3.3e-06 56.6 134 32.1
Lsat_1_v5_gn_1_2800 Lactuca sativa HOM05D037404 ORTHO05D035140 5.6e-06 55.8 120 26.7
Lsat_1_v5_gn_9_73660 Lactuca sativa HOM05D004728 ORTHO05D045252 7.3e-06 55.5 162 37.0
TAR376G0192 Trochodendron aralioides HOM05D004728 ORTHO05D002375 7.3e-06 55.5 71 45.1
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 9.5e-06 55.1 171 34.5


User provided reference genes

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